mRNA_M-pyrifera_M_contig100454.97.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100454.97.1
Unique NamemRNA_M-pyrifera_M_contig100454.97.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A0A518ADD2_9PLAN (N,N'-diacetylchitobiose phosphorylase n=5 Tax=Gimesia TaxID=1649453 RepID=A0A518ADD2_9PLAN)

HSP 1 Score: 429 bits (1104), Expect = 2.050e-135
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            HGHILLQQLSASEMDAQVYGRL+SSILYASSLRRAK SILSLNRQGQSGLWAYGISGDLPIVLVRIR HEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIP LVPIRSS TPLIPG+HPQY+LAYFNGLGGFSQDGREYVTILP+GKTTP
Sbjct: 1922 HGHILLQQLSASEMDAQVYGRLSSSILYASSLRRAKMSILSLNRQGQSGLWAYGISGDLPIVLVRIRDHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPRLVPIRSSTTPLIPGNHPQYDLAYFNGLGGFSQDGREYVTILPSGKTTP 2147          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A0A350K801_9PLAN (Cyclic beta 1-2 glucan synthetase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K801_9PLAN)

HSP 1 Score: 348 bits (894), Expect = 1.500e-113
Identity = 176/226 (77.88%), Postives = 199/226 (88.05%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            HGHILLQQLSASEMDAQ+YGRLASSI+YASSLRRAK SILSLN+QGQSGLW YGISGDLPIVL+RIR H +I LV+QAV+AHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADL+AAS EA   D+PGGIFIRR EQMSEEDRILLQ+VARI+L DD GTLQ+Q ERF RT+  +P+L+P R   T  +  + PQY+LA+FNGLGGFS+DG EY+TIL AG+TTP
Sbjct:  206 HGHILLQQLSASEMDAQIYGRLASSIIYASSLRRAKTSILSLNQQGQSGLWGYGISGDLPIVLIRIRDHIRIGLVKQAVQAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLVAASSEAVLIDRPGGIFIRRGEQMSEEDRILLQTVARIVLLDDAGTLQEQTERFGRTDAAVPYLIPSRVLKTQPLVDNPPQYDLAFFNGLGGFSRDGHEYITILAAGQTTP 431          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A6BYT1_9PLAN (Putative carbohydrate binding:Glycosyltransferase 36:Glycosyltransferase 36 associated protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6BYT1_9PLAN)

HSP 1 Score: 358 bits (919), Expect = 1.510e-110
Identity = 182/226 (80.53%), Postives = 201/226 (88.94%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            HGHILLQQLSASEMDAQ+YGRLASSI+YASSLRRAK SILSLNRQGQSGLW YGISGDLPIVLVRIR HE+I LV+QAV+AHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADL+AAS EA   D+PGGIFIRR EQMSEEDRILLQ+VARI+L DD GTLQ+QAERF RT+V +P+L+P R   T  +  + PQY+LA+FNGLGGFSQDG EY+TIL  GKTTP
Sbjct: 1916 HGHILLQQLSASEMDAQIYGRLASSIIYASSLRRAKTSILSLNRQGQSGLWGYGISGDLPIVLVRIRDHERIGLVKQAVQAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLVAASSEAVLIDRPGGIFIRRGEQMSEEDRILLQTVARIVLLDDAGTLQEQAERFGRTDVAVPYLIPSRVLKTQPLVDNPPQYDLAFFNGLGGFSQDGHEYITILATGKTTP 2141          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A0A355G4J7_9PLAN (Cyclic beta 1-2 glucan synthetase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355G4J7_9PLAN)

HSP 1 Score: 353 bits (907), Expect = 2.260e-109
Identity = 178/226 (78.76%), Postives = 200/226 (88.50%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            HGHILLQQLSASEMDAQ+YGRLASSI+YASSLRRAK SIL+LNRQGQSGLW YGISGDLPIVLVRI  H++I LV+QAV+AHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADL+AAS EA   D+PGGIFIRR EQ+SEEDRILLQ+VARI+L DD GTLQ+QAERF RT+V +P+L+P R   T  +   HP Y+LA+FNGLGGFSQDG EY+TIL AG+TTP
Sbjct:  699 HGHILLQQLSASEMDAQIYGRLASSIIYASSLRRAKTSILNLNRQGQSGLWGYGISGDLPIVLVRICDHKRIGLVKQAVQAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLVAASSEAVLIDRPGGIFIRRGEQISEEDRILLQTVARIVLLDDAGTLQEQAERFGRTDVAVPYLIPSRVLKTQPVSNDHPHYDLAFFNGLGGFSQDGHEYITILAAGQTTP 924          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A3ZX49_9BACT (Cyclic beta 1-2 glucan synthetase n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZX49_9BACT)

HSP 1 Score: 323 bits (829), Expect = 1.890e-98
Identity = 164/226 (72.57%), Postives = 185/226 (81.86%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            H HILL QL+ASE DAQVYGRLASSI+YAS+L RAK SIL+LNRQGQSGLW YGISGDLPIVLVRIR HE++ +V QAV+AH+YWR+KGLAVDLVIWNEDDSVYRQ+LQD I DL+AASPEA   D+PGG+FIRR EQMS+EDR LLQ+VARI+L DD GTL +Q ER  R  V IPHL P RS          P  +LA+FNGLGGFSQDGREYVT L AG+TTP
Sbjct: 1912 HSHILLTQLNASETDAQVYGRLASSIIYASTLHRAKASILALNRQGQSGLWGYGISGDLPIVLVRIRDHERLSIVHQAVQAHSYWRMKGLAVDLVIWNEDDSVYRQTLQDSIVDLVAASPEAPLIDRPGGVFIRRGEQMSDEDRALLQTVARIVLLDDAGTLAEQVERRGRAPVSIPHLRPTRSPDIANASAESPDRDLAFFNGLGGFSQDGREYVTTLAAGQTTP 2137          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A0A518CT81_9PLAN (N,N'-diacetylchitobiose phosphorylase n=2 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CT81_9PLAN)

HSP 1 Score: 308 bits (788), Expect = 6.120e-93
Identity = 151/226 (66.81%), Postives = 186/226 (82.30%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            HGHILLQQL ASE+DAQ+YG+LASSI+Y+SS+RRA++ IL+ NRQGQSGLW YGISGDLPIVLV+IR  +++ELV+QAV+AHAYWR+KGLAVDLVIWNEDDSVYRQSLQ+ I DL+A S EA F D+PGGIFIRR EQ+SEEDR+LLQ+V+R+ILS D GTLQ+QAE++VRT   +P L     +  P +    P ++L +FNG GGFSQDG EY+ IL  G+  P
Sbjct: 1922 HGHILLQQLGASELDAQIYGKLASSIIYSSSIRRARRDILNRNRQGQSGLWGYGISGDLPIVLVQIRDADRLELVKQAVQAHAYWRMKGLAVDLVIWNEDDSVYRQSLQERITDLVATSTEALFTDRPGGIFIRRGEQISEEDRVLLQTVSRVILSGDSGTLQEQAEKYVRTSSSVPMLKISEQTSHPSVRFETPYHDLKFFNGYGGFSQDGHEYIIILKKGEAPP 2147          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A0A7M2WUF1_9BACT (Cyclic beta 1-2 glucan synthetase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2WUF1_9BACT)

HSP 1 Score: 307 bits (786), Expect = 1.140e-92
Identity = 152/226 (67.26%), Postives = 182/226 (80.53%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            H H+LL+QL+ +E DAQ +GRLA S++YASSLRRAK ++L+ NR+GQSGLW YGISGDLPIVLVRIR   +IELVRQAV+AHAYWR+KGLAVDLVIWNEDDSVYRQ+ QD I +L+AASPEA   DKPGGIF+RR EQMSEEDR LLQ+VAR++L DD GTL +Q ER  R EV IP  +P+R    P +    P   L +FNGLGGFS+DGREY+T+L  G+TTP
Sbjct: 1933 HAHVLLRQLNITEADAQSFGRLAGSVIYASSLRRAKAAVLTRNRRGQSGLWGYGISGDLPIVLVRIRDITRIELVRQAVQAHAYWRMKGLAVDLVIWNEDDSVYRQTSQDAIMNLVAASPEAAMVDKPGGIFVRRGEQMSEEDRALLQTVARVVLLDDAGTLAEQVERRGRAEVAIPPFMPVRRKPEPPVATEVPDSELMFFNGLGGFSKDGREYITVLRPGQTTP 2158          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A0A177PXH2_9PLAN (Cyclic beta 1-2 glucan synthetase n=1 Tax=Planctomycetaceae bacterium SCGC AG-212-D15 TaxID=1799653 RepID=A0A177PXH2_9PLAN)

HSP 1 Score: 301 bits (771), Expect = 1.180e-90
Identity = 152/226 (67.26%), Postives = 180/226 (79.65%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            H  +LL+QL+A+E DAQ Y RLA S++YASSLRRAK S+L+ NR+GQSGLW YGISGDLPIVLVRIR H +I L+ QA++AHAYWR+KGL VDLVIWNEDDSVYRQSLQD IADLIAAS EA   D+PGG+F+ R EQMSEEDR LLQ+VAR++L DD G+L +Q ER  R EV IP L P R    P I    P  +LA+FNGLGGFS+DGREY+T+L  G+TTP
Sbjct: 1937 HSQVLLRQLNATEADAQAYSRLAGSVIYASSLRRAKASVLARNRRGQSGLWGYGISGDLPIVLVRIRDHARIALIHQAMQAHAYWRMKGLEVDLVIWNEDDSVYRQSLQDAIADLIAASAEAAHMDRPGGVFVLRGEQMSEEDRALLQTVARVVLVDDAGSLFEQVERRGRPEVLIPGLKPSRRRAEPPIVPEIPHRDLAFFNGLGGFSRDGREYITVLHPGQTTP 2162          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: A0A177QSA5_9PLAN (Cyclic beta 1-2 glucan synthetase n=1 Tax=Planctomycetaceae bacterium SCGC AG-212-F19 TaxID=1799658 RepID=A0A177QSA5_9PLAN)

HSP 1 Score: 299 bits (766), Expect = 5.540e-90
Identity = 152/226 (67.26%), Postives = 180/226 (79.65%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            H HILLQQL+A+E DAQ YGRLA SI++AS+ RRAK S+L+ NR+GQSGLW YGISGDLPIVLVR R   +IELVRQAV AHAYWR++GL+VDLVIWNEDDSVYRQ+LQD I DL+A+SPEA   DKPGGIF+RR EQMSEEDR LLQ+VAR++L+DD GTL +Q ER  R +V IP L P R+   P       Q +L +FNGLGGF++DGREYV  L A +TTP
Sbjct: 1979 HSHILLQQLNATETDAQAYGRLAGSIIFASAQRRAKASVLTRNRRGQSGLWGYGISGDLPIVLVRSRDRTRIELVRQAVHAHAYWRMRGLSVDLVIWNEDDSVYRQTLQDMIMDLVASSPEAALVDKPGGIFVRRGEQMSEEDRSLLQTVARVVLADDAGTLLEQVERRGRADVLIPALKPARNRAGPRAAAELSQRDLMFFNGLGGFTRDGREYVITLGARQTTP 2204          
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Match: UPI0019B64003 (Cyclic beta 1-2 glucan synthetase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019B64003)

HSP 1 Score: 293 bits (749), Expect = 5.440e-89
Identity = 144/226 (63.72%), Postives = 179/226 (79.20%), Query Frame = 1
Query:    1 HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGLWAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNEDDSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSVARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLAYFNGLGGFSQDGREYVTILPAGKTTP 678
            H HILLQQ++A+E DAQVY RLA ++++AS + RAK ++L+ NR+GQSGLW YGISGD+PIVLVR+   +KI+L RQA++AHAYWRLKG+ VDLVIWNEDDSVYRQ+LQD I DLIAASPEA   DKPGGIF+RR E +S+EDR LLQ+VAR++L DD G+L +QAER  R+EV IP + P R    P      P  +LA+FNGLGGFS+DGREYVT+L   + TP
Sbjct:  713 HSHILLQQINATEADAQVYARLAGAVVFASDVHRAKANVLARNRRGQSGLWGYGISGDIPIVLVRVSDRDKIDLCRQAIRAHAYWRLKGITVDLVIWNEDDSVYRQTLQDAIMDLIAASPEAALVDKPGGIFVRRGEAISDEDRTLLQTVARVVLFDDGGSLAEQAERRGRSEVSIPPMRPTRKRAEPRRVAEMPTRDLAFFNGLGGFSRDGREYVTLLGPKQITP 938          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100454.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518ADD2_9PLAN2.050e-13596.46N,N'-diacetylchitobiose phosphorylase n=5 Tax=Gime... [more]
A0A350K801_9PLAN1.500e-11377.88Cyclic beta 1-2 glucan synthetase (Fragment) n=1 T... [more]
A6BYT1_9PLAN1.510e-11080.53Putative carbohydrate binding:Glycosyltransferase ... [more]
A0A355G4J7_9PLAN2.260e-10978.76Cyclic beta 1-2 glucan synthetase (Fragment) n=1 T... [more]
A3ZX49_9BACT1.890e-9872.57Cyclic beta 1-2 glucan synthetase n=1 Tax=Blastopi... [more]
A0A518CT81_9PLAN6.120e-9366.81N,N'-diacetylchitobiose phosphorylase n=2 Tax=Poly... [more]
A0A7M2WUF1_9BACT1.140e-9267.26Cyclic beta 1-2 glucan synthetase n=1 Tax=Phycisph... [more]
A0A177PXH2_9PLAN1.180e-9067.26Cyclic beta 1-2 glucan synthetase n=1 Tax=Planctom... [more]
A0A177QSA5_9PLAN5.540e-9067.26Cyclic beta 1-2 glucan synthetase n=1 Tax=Planctom... [more]
UPI0019B640035.440e-8963.72Cyclic beta 1-2 glucan synthetase n=1 Tax=Deltapro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100454contigM-pyrifera_M_contig100454:1..678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score360.1
Seed ortholog evalue7.3e-97
Seed eggNOG ortholog344747.PM8797T_27899
Preferred namendvB
KEGG koko:K13688
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Putative glucoamylase
EggNOG OGs2IYJ0@203682,COG3459@1,COG3459@2
COG Functional cat.G
CAZyGH94,GT84
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Exons1
Model size678
Cds size678
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.6563601-CDS-M-pyrifera_M_contig100454:0..6781622815500.6563601-CDS-M-pyrifera_M_contig100454:0..678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100454 1..678 -
1692277439.640224-CDS-M-pyrifera_M_contig100454:0..6781692277439.640224-CDS-M-pyrifera_M_contig100454:0..678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100454 1..678 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100454.97.1prot_M-pyrifera_M_contig100454.97.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100454 1..678 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100454.97.1

>prot_M-pyrifera_M_contig100454.97.1 ID=prot_M-pyrifera_M_contig100454.97.1|Name=mRNA_M-pyrifera_M_contig100454.97.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
HGHILLQQLSASEMDAQVYGRLASSILYASSLRRAKKSILSLNRQGQSGL
WAYGISGDLPIVLVRIRAHEKIELVRQAVKAHAYWRLKGLAVDLVIWNED
DSVYRQSLQDEIADLIAASPEAGFCDKPGGIFIRRVEQMSEEDRILLQSV
ARIILSDDRGTLQDQAERFVRTEVPIPHLVPIRSSITPLIPGSHPQYNLA
YFNGLGGFSQDGREYVTILPAGKTTP
back to top

mRNA from alignment at M-pyrifera_M_contig100454:1..678-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100454.97.1 ID=mRNA_M-pyrifera_M_contig100454.97.1|Name=mRNA_M-pyrifera_M_contig100454.97.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig100454:1..678- (Macrocystis pyrifera P11B4 male)
CATGGGCACATTCTACTGCAACAGCTGAGTGCTTCGGAAATGGATGCGCA GGTTTATGGCCGACTGGCCAGTTCAATCCTATATGCTTCCTCTCTCCGGC GTGCCAAAAAGAGCATTCTCAGTCTTAATCGGCAGGGGCAATCCGGTCTC TGGGCATACGGGATCTCGGGGGACCTGCCCATTGTTCTGGTCCGTATTCG CGCTCATGAAAAGATCGAGCTTGTCAGGCAGGCTGTAAAGGCACACGCTT ACTGGCGACTGAAAGGACTGGCCGTCGATCTGGTCATCTGGAACGAAGAT GATTCGGTATATCGACAAAGTCTGCAAGACGAAATCGCCGACCTGATTGC CGCCAGCCCTGAAGCAGGGTTTTGTGATAAACCGGGAGGCATCTTTATCC GCAGAGTCGAACAAATGTCAGAGGAAGACCGCATTTTATTGCAGTCAGTG GCACGCATCATTTTGTCAGACGACAGAGGTACTCTCCAGGATCAGGCCGA ACGCTTCGTGCGAACTGAAGTCCCGATTCCTCATCTGGTTCCCATTCGGA GTTCCATCACACCACTGATTCCTGGAAGCCATCCGCAATATAATCTGGCC TATTTTAATGGTCTGGGCGGGTTCAGCCAGGACGGTCGCGAGTATGTAAC CATTCTACCCGCTGGAAAAACAACGCCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig100454:1..678-

>mRNA_M-pyrifera_M_contig100454.97.1 ID=mRNA_M-pyrifera_M_contig100454.97.1|Name=mRNA_M-pyrifera_M_contig100454.97.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig100454:1..678- (Macrocystis pyrifera P11B4 male)
CATGGGCACATTCTACTGCAACAGCTGAGTGCTTCGGAAATGGATGCGCA
GGTTTATGGCCGACTGGCCAGTTCAATCCTATATGCTTCCTCTCTCCGGC
GTGCCAAAAAGAGCATTCTCAGTCTTAATCGGCAGGGGCAATCCGGTCTC
TGGGCATACGGGATCTCGGGGGACCTGCCCATTGTTCTGGTCCGTATTCG
CGCTCATGAAAAGATCGAGCTTGTCAGGCAGGCTGTAAAGGCACACGCTT
ACTGGCGACTGAAAGGACTGGCCGTCGATCTGGTCATCTGGAACGAAGAT
GATTCGGTATATCGACAAAGTCTGCAAGACGAAATCGCCGACCTGATTGC
CGCCAGCCCTGAAGCAGGGTTTTGTGATAAACCGGGAGGCATCTTTATCC
GCAGAGTCGAACAAATGTCAGAGGAAGACCGCATTTTATTGCAGTCAGTG
GCACGCATCATTTTGTCAGACGACAGAGGTACTCTCCAGGATCAGGCCGA
ACGCTTCGTGCGAACTGAAGTCCCGATTCCTCATCTGGTTCCCATTCGGA
GTTCCATCACACCACTGATTCCTGGAAGCCATCCGCAATATAATCTGGCC
TATTTTAATGGTCTGGGCGGGTTCAGCCAGGACGGTCGCGAGTATGTAAC
CATTCTACCCGCTGGAAAAACAACGCCTCATGGGCACATTCTACTGCAAC
AGCTGAGTGCTTCGGAAATGGATGCGCAGGTTTATGGCCGACTGGCCAGT
TCAATCCTATATGCTTCCTCTCTCCGGCGTGCCAAAAAGAGCATTCTCAG
TCTTAATCGGCAGGGGCAATCCGGTCTCTGGGCATACGGGATCTCGGGGG
ACCTGCCCATTGTTCTGGTCCGTATTCGCGCTCATGAAAAGATCGAGCTT
GTCAGGCAGGCTGTAAAGGCACACGCTTACTGGCGACTGAAAGGACTGGC
CGTCGATCTGGTCATCTGGAACGAAGATGATTCGGTATATCGACAAAGTC
TGCAAGACGAAATCGCCGACCTGATTGCCGCCAGCCCTGAAGCAGGGTTT
TGTGATAAACCGGGAGGCATCTTTATCCGCAGAGTCGAACAAATGTCAGA
GGAAGACCGCATTTTATTGCAGTCAGTGGCACGCATCATTTTGTCAGACG
ACAGAGGTACTCTCCAGGATCAGGCCGAACGCTTCGTGCGAACTGAAGTC
CCGATTCCTCATCTGGTTCCCATTCGGAGTTCCATCACACCACTGATTCC
TGGAAGCCATCCGCAATATAATCTGGCCTATTTTAATGGTCTGGGCGGGT
TCAGCCAGGACGGTCGCGAGTATGTAACCATTCTACCCGCTGGAAAAACA
ACGCCT
back to top