mRNA_M-pyrifera_M_contig100220.51.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100220.51.1
Unique NamemRNA_M-pyrifera_M_contig100220.51.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A2R5GPK3_9STRA (TBC1 domain family member 22B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPK3_9STRA)

HSP 1 Score: 237 bits (605), Expect = 4.770e-74
Identity = 119/228 (52.19%), Postives = 156/228 (68.42%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDLTQ-------SVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAE 663
            +RG VW+LLLGY+P  +ERR   L RKRQEY   +  Y+   + E  RS+ +Q MLRQIL D+ RT  G+PL  C+ V+R+LER+LYIWA+RHPA+GYVQG+ND+  PF   F    L     +       S+ D + LR VEAD +WCL+++LD +QD YT+ QPGL R  +RLQ +I R+D+PL DHL++  V   QFA RW+NCLLVREL L   VRLWD+Y+AE
Sbjct:   68 VRGPVWQLLLGYLPTKRERRDATLRRKRQEYFDCLPMYYNNADAE--RSEEDQKMLRQILLDIPRTNPGMPLFHCDEVRRSLERMLYIWAIRHPASGYVQGMNDLVTPFYVVFLADHLSDGEIKTINAYDASIVDSDILRAVEADSYWCLTKLLDGIQDHYTMLQPGLQRMFYRLQGIIQRIDQPLHDHLQNEHVDFNQFAFRWMNCLLVRELELNSIVRLWDTYLAE 293          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A444Y8J4_ARAHY (Rab-GAP TBC domain-containing protein n=4 Tax=Arachis TaxID=3817 RepID=A0A444Y8J4_ARAHY)

HSP 1 Score: 225 bits (574), Expect = 2.360e-68
Identity = 113/227 (49.78%), Postives = 155/227 (68.28%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVD-LTQSVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672
            +R  VWRLLLGY P + +RR  VL RKR EY   V +Y+  +  E VRSD E +MLRQI  D  RT   VP  + + VQ++LER+LY WA+RHPA+GYVQG+ND+  PFL  F    L  G+D  + S    E +  +EAD +WCLS++LD +QD YT  QPG+ R V +L++++ R+D+P+++H+E  G+  +QFA RW NCLL+RE+P  L  RLWD+Y+AEG A
Sbjct:  160 MRPTVWRLLLGYAPPNSDRRDGVLRRKRLEYLDCVSQYY--DIPETVRSDDEINMLRQIAVDCPRTVPDVPFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLQGGIDNWSMSDLSAEKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSNHMELQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDA 384          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A7S0D3Z1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D3Z1_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 2.830e-68
Identity = 107/224 (47.77%), Postives = 156/224 (69.64%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDLTQSVED---GEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAE 663
            +R DVW+L+LGY P ++ERR   + ++R+EY  H R  +  +E     S  E+ ++ QI  D  RT  G+ L++ +++Q+ LER+LYIW+VRHPA+GYVQG+ND+ +PFL  F  +  GV+LT+  E     E L+ VEAD FWC+S ++D +QD YT  QPG+ R V +LQ++I RLD+PL DHL+   VR   F+ RW+NC+LVREL +PL VR+WD+Y+A+
Sbjct:  181 VRSDVWQLILGYQPTNRERRGPTVAKRRKEYQDHCRNIYFEDESRY--SSSERKIMHQIRLDTPRTLPGLTLLQHKSIQKLLERILYIWSVRHPASGYVQGINDLVIPFLMVFLAARNGVELTELEEKHVTAEHLKIVEADCFWCMSNLIDGIQDNYTSSQPGIQRMVFKLQELIHRLDQPLHDHLKSHEVRFFDFSYRWMNCVLVRELSMPLIVRVWDTYIAQ 402          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A7C9DN70_OPUST (Rab-GAP TBC domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DN70_OPUST)

HSP 1 Score: 219 bits (559), Expect = 7.510e-68
Identity = 111/227 (48.90%), Postives = 153/227 (67.40%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVDLTQSVE-DGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672
            +R +VWRLLLGY P + +RR  VL RKR EY   V +Y+   + E  R+D E SMLRQI  D  RT   V   +   VQ++LER+LY WA+RHPA+GYVQG+ND+  PFL  F    L   +D   +++   + +  +EAD +WCLS+MLDS+QD YT  QPG+ R V +L++++ R+D+P++ HLE  G+  +QFA RW NCLL+RE+P  L  RLWD+Y+AEG A
Sbjct:   14 MRPNVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVAQYYDIPDTE--RTDDEISMLRQIAVDCPRTVPDVTFFQQAVVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLQGSIDNWSALDLSKDTIANIEADCYWCLSKMLDSMQDHYTFAQPGIQRLVFKLKELVQRIDEPVSRHLEEQGLDFLQFAFRWFNCLLIREIPFNLVARLWDTYLAEGDA 238          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: S8CEZ3_9LAMI (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CEZ3_9LAMI)

HSP 1 Score: 224 bits (571), Expect = 7.710e-68
Identity = 115/230 (50.00%), Postives = 154/230 (66.96%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVD------LTQSVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEG 666
            +R  VWRLLLGY P + +RR  VL RKRQEY   V  Y+  +  ++ R+D E +MLRQI  D  RT   V   +   VQ++LER+LYIWA+RHPA+GYVQG+ND+A PFL  F    L  G+D      LTQ     E + +VEAD +WCLS++LD +QD YT  QPG+ R V +L++++ R+D PL+ H+E  G+  +QFA RW NCLL+RE+P  L  RLWD+Y+AEG
Sbjct:  166 MRPTVWRLLLGYAPCNSDRREAVLRRKRQEYLDCVAHYY--DIPDIGRTDEEINMLRQIAVDCPRTVPDVSFFQQAQVQKSLERVLYIWAIRHPASGYVQGINDLATPFLVVFLSEHLEGGIDSWRMSDLTQ-----ERISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLRELVRRIDDPLSKHMEEQGLEFLQFAFRWFNCLLIREIPFRLVARLWDTYLAEG 388          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A5N6Q0S6_9ASTR (Rab-GAP TBC domain-containing protein n=6 Tax=Asteraceae TaxID=4210 RepID=A0A5N6Q0S6_9ASTR)

HSP 1 Score: 223 bits (569), Expect = 1.460e-67
Identity = 112/227 (49.34%), Postives = 154/227 (67.84%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVDLTQSVE-DGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672
            LR +VWRLLLGY P + +RR  VL RKR EY   V +Y+   + E  R+D E +MLRQI  D  RT   V   +  AVQ++LER+LY WA+RHPA+GYVQG+ND+A PFL  F    L   +D     + D E + +VEAD +WCLS++LD +QD YT  QPG+ R V +L++++ R+D+P+A H++  G+  +QFA RW NCLL+RE+P  L  RLWD+Y++EG A
Sbjct:  164 LRPNVWRLLLGYAPPNSDRREGVLRRKRSEYFDCVAQYYDISDNE--RTDEEINMLRQIAVDCPRTVPDVTFFQQAAVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEHLEGSIDNWSIADLDAEKISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVAKHIDEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLSEGDA 388          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A068V4L3_COFCA (Rab-GAP TBC domain-containing protein n=5 Tax=Coffea TaxID=13442 RepID=A0A068V4L3_COFCA)

HSP 1 Score: 223 bits (569), Expect = 1.650e-67
Identity = 115/231 (49.78%), Postives = 156/231 (67.53%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDLTQSVEDG-------EGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672
            LR  VWRLLLGY P + +RR  VL RKR EY   V +Y+  ++ E  R+D E +MLRQI  D  RT   V   +   VQ++LER+LYIWA+RHPA+GYVQG+ND+A PFL  F    L   L  SVE+        + +  VEAD +WCLS++LD +QD YT  QPG+ R V +L++++ R+D+P++ H+E+ G+  +QFA RWVNCLL+RE+P  L  RLWD+Y+AEG A
Sbjct:  169 LRPSVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVAQYYDVQDTE--RTDEEINMLRQIAVDCPRTVPDVSFFQQPEVQKSLERILYIWAIRHPASGYVQGINDLATPFLVVF----LSEHLEGSVENWSMADLSPDQISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSTHMENQGLEFLQFAFRWVNCLLIREIPFHLVTRLWDTYLAEGDA 393          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A6I9QIA0_ELAGV (TBC1 domain family member 22B isoform X2 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QIA0_ELAGV)

HSP 1 Score: 223 bits (567), Expect = 2.830e-67
Identity = 113/227 (49.78%), Postives = 152/227 (66.96%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVDLTQSVE-DGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672
            +R DVWRLLLGY P   +RR  VL RKR EY   V +Y+   + E  RSD E SMLRQI  D  RT   VP  + E +Q++LER+LY WA+RHPA+GYVQG+ND+  PFL  F    L  G++     E   + + EVEAD +WCLS++LD +QD YT  QPG+ R V +L++++ R+D+P++  +E  G+  +QFA RW NCLL+RE+P  L  RLWD+Y+AEG A
Sbjct:  163 MRPDVWRLLLGYAPPSSDRREGVLTRKRLEYVDCVSQYYDIPDTE--RSDDEISMLRQIAVDCPRTVPDVPFFQHEQIQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLDGGMESWSISELSPQKISEVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRRMEEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDA 387          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A4D9BF88_SALSN (Rab-GAP TBC domain-containing protein n=8 Tax=Salvia TaxID=21880 RepID=A0A4D9BF88_SALSN)

HSP 1 Score: 223 bits (567), Expect = 2.980e-67
Identity = 113/227 (49.78%), Postives = 154/227 (67.84%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDL-TQSVED--GEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672
            LR  VWRLLLGY P++ +RR  VL RKR EY  HV +Y+  E  + +R+D E  MLRQI  D  RT   +   +   VQ++LER+LY WA+RHPA+GYVQG+ND+A PFL  F    L   + T S+ D   E +  VEAD +WCLS++LD +QD YT  QPG+ R V +L++++ R+D+P++ H+E  G+  +QFA RW NCLL+RE+P  L  RLWD+Y+AEG A
Sbjct:  165 LRPTVWRLLLGYAPSNSDRREGVLRRKRTEYLDHVEQYY--EIPDTLRTDEEIGMLRQIAVDCPRTVPDLSFFQQAEVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEYLEGSIDTWSMADLSREKILNVEADSYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSKHIEEQGLEFLQFAFRWFNCLLIREIPFGLVSRLWDTYLAEGDA 389          
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A7C8YZN1_OPUST (Rab-GAP TBC domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YZN1_OPUST)

HSP 1 Score: 223 bits (567), Expect = 2.980e-67
Identity = 111/227 (48.90%), Postives = 151/227 (66.52%), Query Frame = 1
Query:    1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDL---TQSVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672
            +R +VWRLLLGY P + +RR  VL RKR EY  +V +Y+   E E  RSD E +MLRQI  D  RT   V   +  AVQ++LER+LY WA+RHPA+GYVQG+ND+  PFL  F    L   +   + S    E +  VEAD +WCLS++LD +QD YT  QPG+ R V + ++++ R+D+P++ H+E  G+  +QFA RW NCLL+RE+P  L  RLWD+Y+AEG A
Sbjct:  165 MRPNVWRLLLGYAPPNSDRREGVLRRKRLEYLDYVAQYYDVPETE--RSDDEANMLRQIAVDCPRTVPDVTFFQQAAVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLEGSIDSWSASNLSKEKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKFKELVRRIDEPVSTHMEEQGLEYLQFAFRWFNCLLIREIPFNLVTRLWDTYLAEGDA 389          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5GPK3_9STRA4.770e-7452.19TBC1 domain family member 22B n=1 Tax=Hondaea ferm... [more]
A0A444Y8J4_ARAHY2.360e-6849.78Rab-GAP TBC domain-containing protein n=4 Tax=Arac... [more]
A0A7S0D3Z1_9EUKA2.830e-6847.77Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7C9DN70_OPUST7.510e-6848.90Rab-GAP TBC domain-containing protein n=1 Tax=Opun... [more]
S8CEZ3_9LAMI7.710e-6850.00Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A5N6Q0S6_9ASTR1.460e-6749.34Rab-GAP TBC domain-containing protein n=6 Tax=Aste... [more]
A0A068V4L3_COFCA1.650e-6749.78Rab-GAP TBC domain-containing protein n=5 Tax=Coff... [more]
A0A6I9QIA0_ELAGV2.830e-6749.78TBC1 domain family member 22B isoform X2 n=4 Tax=A... [more]
A0A4D9BF88_SALSN2.980e-6749.78Rab-GAP TBC domain-containing protein n=8 Tax=Salv... [more]
A0A7C8YZN1_OPUST2.980e-6748.90Rab-GAP TBC domain-containing protein n=1 Tax=Opun... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100220contigM-pyrifera_M_contig100220:10..681 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score226.1
Seed ortholog evalue1.6e-56
Seed eggNOG ortholog3702.AT2G30710.1
KEGG koko:K20360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006810,GO:0006886,GO:0008047,GO:0008104,GO:0008150,GO:0012505,GO:0015031,GO:0015833,GO:0016192,GO:0017016,GO:0017137,GO:0019899,GO:0030234,GO:0030695,GO:0031267,GO:0031338,GO:0032879,GO:0033036,GO:0033043,GO:0034613,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0050789,GO:0050790,GO:0050794,GO:0051020,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0060589,GO:0060627,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0090630,GO:0098772
EggNOG free text desc.Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs.
EggNOG OGs37PJA@33090,3G7PA@35493,3HVGF@3699,KOG1092@1,KOG1092@2759
COG Functional cat.U
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size672
Cds size672
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815497.5560164-CDS-M-pyrifera_M_contig100220:9..6811622815497.5560164-CDS-M-pyrifera_M_contig100220:9..681Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100220 10..681 -
1692277438.5709448-CDS-M-pyrifera_M_contig100220:9..6811692277438.5709448-CDS-M-pyrifera_M_contig100220:9..681Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100220 10..681 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100220.51.1prot_M-pyrifera_M_contig100220.51.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100220 10..681 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100220.51.1

>prot_M-pyrifera_M_contig100220.51.1 ID=prot_M-pyrifera_M_contig100220.51.1|Name=mRNA_M-pyrifera_M_contig100220.51.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp
LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSD
GEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQ
GLNDVALPFLAAFCFSDLGVDLTQSVEDGEGLREVEADVFWCLSRMLDSV
QDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNC
LLVRELPLPLAVRLWDSYVAEGAA
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mRNA from alignment at M-pyrifera_M_contig100220:10..681-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100220.51.1 ID=mRNA_M-pyrifera_M_contig100220.51.1|Name=mRNA_M-pyrifera_M_contig100220.51.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig100220:10..681- (Macrocystis pyrifera P11B4 male)
CTGCGTGGGGACGTGTGGCGGCTGTTGTTGGGGTACATGCCAGCGCACAA GGAGCGGAGGCGGGTGGTGCTGTGTCGGAAGCGGCAAGAGTACCATGCGC ATGTGCGTCGTTACTTTGGCGGGGAGGAGTTGGAGGTGGTTCGTTCGGAC GGGGAGCAGAGCATGTTGCGTCAGATTCTCAAGGACGTGAATCGGACTGG GGACGGCGTTCCGCTGGTGCGGTGTGAGGCGGTGCAGAGGGCGTTGGAGC GGCTCCTGTACATTTGGGCGGTGCGTCATCCTGCTGCGGGCTACGTGCAG GGTCTGAACGACGTCGCATTGCCGTTTTTGGCAGCGTTTTGCTTCAGCGA TTTGGGGGTTGACTTGACGCAGTCGGTGGAGGACGGGGAAGGGTTGCGGG AAGTGGAGGCTGATGTGTTCTGGTGCCTCAGCAGAATGCTCGATTCCGTG CAAGACTGGTACACTGTGGGGCAGCCGGGATTACATCGGCAAGTGCACCG ACTGCAGGACGTGATCACGCGGCTGGACAAACCTCTGGCCGACCACCTGG AGCACATTGGAGTGCGGCCCATTCAGTTTGCTGCTCGGTGGGTGAACTGT TTATTGGTGCGAGAACTTCCTTTGCCTCTCGCAGTGCGGCTGTGGGATTC GTACGTCGCCGAGGGCGCTGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100220:10..681-

>mRNA_M-pyrifera_M_contig100220.51.1 ID=mRNA_M-pyrifera_M_contig100220.51.1|Name=mRNA_M-pyrifera_M_contig100220.51.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig100220:10..681- (Macrocystis pyrifera P11B4 male)
CTGCGTGGGGACGTGTGGCGGCTGTTGTTGGGGTACATGCCAGCGCACAA
GGAGCGGAGGCGGGTGGTGCTGTGTCGGAAGCGGCAAGAGTACCATGCGC
ATGTGCGTCGTTACTTTGGCGGGGAGGAGTTGGAGGTGGTTCGTTCGGAC
GGGGAGCAGAGCATGTTGCGTCAGATTCTCAAGGACGTGAATCGGACTGG
GGACGGCGTTCCGCTGGTGCGGTGTGAGGCGGTGCAGAGGGCGTTGGAGC
GGCTCCTGTACATTTGGGCGGTGCGTCATCCTGCTGCGGGCTACGTGCAG
GGTCTGAACGACGTCGCATTGCCGTTTTTGGCAGCGTTTTGCTTCAGCGA
TTTGGGGGTTGACTTGACGCAGTCGGTGGAGGACGGGGAAGGGTTGCGGG
AAGTGGAGGCTGATGTGTTCTGGTGCCTCAGCAGAATGCTCGATTCCGTG
CAAGACTGGTACACTGTGGGGCAGCCGGGATTACATCGGCAAGTGCACCG
ACTGCAGGACGTGATCACGCGGCTGGACAAACCTCTGGCCGACCACCTGG
AGCACATTGGAGTGCGGCCCATTCAGTTTGCTGCTCGGTGGGTGAACTGT
TTATTGGTGCGAGAACTTCCTTTGCCTCTCGCAGTGCGGCTGTGGGATTC
GTACGTCGCCGAGGGCGCTGCCCTGCGTGGGGACGTGTGGCGGCTGTTGT
TGGGGTACATGCCAGCGCACAAGGAGCGGAGGCGGGTGGTGCTGTGTCGG
AAGCGGCAAGAGTACCATGCGCATGTGCGTCGTTACTTTGGCGGGGAGGA
GTTGGAGGTGGTTCGTTCGGACGGGGAGCAGAGCATGTTGCGTCAGATTC
TCAAGGACGTGAATCGGACTGGGGACGGCGTTCCGCTGGTGCGGTGTGAG
GCGGTGCAGAGGGCGTTGGAGCGGCTCCTGTACATTTGGGCGGTGCGTCA
TCCTGCTGCGGGCTACGTGCAGGGTCTGAACGACGTCGCATTGCCGTTTT
TGGCAGCGTTTTGCTTCAGCGATTTGGGGGTTGACTTGACGCAGTCGGTG
GAGGACGGGGAAGGGTTGCGGGAAGTGGAGGCTGATGTGTTCTGGTGCCT
CAGCAGAATGCTCGATTCCGTGCAAGACTGGTACACTGTGGGGCAGCCGG
GATTACATCGGCAAGTGCACCGACTGCAGGACGTGATCACGCGGCTGGAC
AAACCTCTGGCCGACCACCTGGAGCACATTGGAGTGCGGCCCATTCAGTT
TGCTGCTCGGTGGGTGAACTGTTTATTGGTGCGAGAACTTCCTTTGCCTC
TCGCAGTGCGGCTGTGGGATTCGTACGTCGCCGAGGGCGCTGCC
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