mRNA_M-pyrifera_M_contig100206.43.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A3D5DGX6_9GAMM (Aminoacylase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGX6_9GAMM) HSP 1 Score: 394 bits (1012), Expect = 6.400e-133 Identity = 181/225 (80.44%), Postives = 203/225 (90.22%), Query Frame = 1 Query: 1 RRNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 +RN GHMQ TMV+GDPKADQ H++EL+ ISGRP++FNVVQA DT+P IHRKV+ WLE CR NG RVYGQGLTTDAG++FTF DWNLFDECPAWREAT+G+ EERLAKL DP RRPALR+Q+PAFVLGPFE IVVTGP E+QQWLDH +GL+AEKTGKH VDAMLDIVVAD L+TEFFSMPPNTR+DYLKEIVDNPY+LFGVSDGGAHTKFLTAGRYPTET+ K Sbjct: 223 QRNAGHMQTTMVTGDPKADQAHMEELANISGRPLVFNVVQAQDTKPHIHRKVIEWLERCRANGTRVYGQGLTTDAGFSFTFVDWNLFDECPAWREATVGTREERLAKLADPERRPALRKQVPAFVLGPFENIVVTGPVGPESQQWLDHPIGLIAEKTGKHPVDAMLDIVVADGLDTEFFSMPPNTRLDYLKEIVDNPYILFGVSDGGAHTKFLTAGRYPTETIIK 447
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A1Z9UI13_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UI13_9GAMM) HSP 1 Score: 383 bits (984), Expect = 1.660e-128 Identity = 177/225 (78.67%), Postives = 198/225 (88.00%), Query Frame = 1 Query: 1 RRNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 +RN GHMQ TMVSGDPKADQ H+ ELS +SGRP++FNVVQ DT+P+IHRKV+ WLE CR G+RVYGQGLTTDAGY FTFEDWNLFDECPAWREAT+G+ EERLAKL DPARRPAL+EQIP V GPFE IVVTGP + E+QQWLDHT+GL+AEKTGK +VD MLDIVVADNLETEFF+ PP TR+D LKE+VD PY+LFGVSDGGAHTKFLTAGRYPTETL K Sbjct: 238 KRNAGHMQTTMVSGDPKADQEHIMELSRVSGRPIVFNVVQVYDTKPQIHRKVIEWLERCRAQGVRVYGQGLTTDAGYGFTFEDWNLFDECPAWREATVGTREERLAKLADPARRPALKEQIPELVTGPFENIVVTGPVAPESQQWLDHTIGLIAEKTGKDLVDVMLDIVVADNLETEFFAAPPGTRLDLLKEVVDVPYILFGVSDGGAHTKFLTAGRYPTETLIK 462
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A1Z8WWB4_9GAMM (Amidohydro_3 domain-containing protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WWB4_9GAMM) HSP 1 Score: 362 bits (928), Expect = 3.210e-120 Identity = 165/225 (73.33%), Postives = 196/225 (87.11%), Query Frame = 1 Query: 1 RRNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 +RN GH+Q T+++GDP ADQ H++EL+ +SGRP+IFNVVQATDT+P IHR+ LAWL+ CR+ GIRVYGQGLTTDAGYAFT DWNLFDEC AWREAT+G+ +ERL KLGD RR +LR+Q+P FV GPFE IV+T PK EE QW DHT+GL+AEKTGKH+VDAMLDI V+++LETEFFSMPPN +I+YLKEIVD+PYVLFGVSDGGAHTKFLTAG YPTET+ K Sbjct: 237 KRNAGHIQTTIITGDPVADQRHMEELALVSGRPVIFNVVQATDTKPHIHRRTLAWLDSCRKRGIRVYGQGLTTDAGYAFTLADWNLFDECAAWREATVGTKQERLVKLGDMNRRQSLRDQVPGFVTGPFENIVLTDPKKEENLQWKDHTIGLIAEKTGKHLVDAMLDIAVSEDLETEFFSMPPNCKIEYLKEIVDDPYVLFGVSDGGAHTKFLTAGGYPTETINK 461
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A352KBH3_9PROT (Aminoacylase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KBH3_9PROT) HSP 1 Score: 336 bits (861), Expect = 7.090e-110 Identity = 158/225 (70.22%), Postives = 186/225 (82.67%), Query Frame = 1 Query: 1 RRNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 RRN+G MQ + SGD +AD+ HL+EL+EISGRPM++NVVQA D +P+IHR L WLE CR G+RVYGQGLTTDAG+ F+FEDWNLFD+ WREAT+G+ EERLAKL DPARR L+ ++P +GP IV+TGPKS ET+ +LDHT+ VAE TGKH VDAMLDI VADNLETEFF+ PPN +I+YLKEIVDNPY+LFGVSDGGAHTKFLTAGRYPTETL K Sbjct: 244 RRNQGFMQMILASGDVEADRRHLEELAEISGRPMLYNVVQAVDHRPEIHRATLKWLEDCRARGVRVYGQGLTTDAGFTFSFEDWNLFDDVAEWREATVGTKEERLAKLADPARREGLKRRMPMAAVGPLPGIVITGPKSAETKPYLDHTLQHVAELTGKHPVDAMLDIAVADNLETEFFAAPPNGKIEYLKEIVDNPYILFGVSDGGAHTKFLTAGRYPTETLIK 468
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A836X2M2_9PROT (Aminoacylase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836X2M2_9PROT) HSP 1 Score: 330 bits (846), Expect = 6.170e-108 Identity = 152/225 (67.56%), Postives = 186/225 (82.67%), Query Frame = 1 Query: 1 RRNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 RRN G++Q TM +GD KAD+ H++EL+EISGRP+++NVVQ+ D +P + R L WLE CR GIRVYGQG+TTDAG+ FTFEDWNLFDE AWREAT+G+ ERL KL DP+RR +L++ +P VL F+EI+VTGP S ET+QWLDHTVG++AEKTGKH VDA+LDIVV D L+TE F+MPPN I+ L+E++DNPYVLFGVSDGGAHTKFLTAGRYPTE L K Sbjct: 220 RRNMGNVQLTMSTGDNKADRKHMEELAEISGRPLVYNVVQSFDDRPHVLRSTLKWLEECRRKGIRVYGQGVTTDAGFTFTFEDWNLFDESSAWREATVGTQAERLQKLADPSRRQSLKDNMPFIVLAAFDEIIVTGPASPETEQWLDHTVGIIAEKTGKHPVDALLDIVVQDELKTELFTMPPNQSIENLQEMMDNPYVLFGVSDGGAHTKFLTAGRYPTEALIK 444
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A5C7PP19_9BURK (Aminoacylase n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A5C7PP19_9BURK) HSP 1 Score: 330 bits (846), Expect = 1.210e-107 Identity = 157/224 (70.09%), Postives = 184/224 (82.14%), Query Frame = 1 Query: 4 RNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 RNEG MQ M+SG+ + Q +E++EISGRPMI NVVQA D +P IHR+VL WL CRE GIRV GQGLTTDAG++FTFE+WNLFD+ AWREAT+G+ EER AKLGDPARR AL++Q+PA GP IV+TGPK E+ +QWLDHT+ LVAEKTG+H VD MLD+ V +NLETEFF+ PPN I+YLKEIVD+PYVLFGVSDGGAHTKFLTAGRYPTETL K Sbjct: 239 RNEGFMQMLMISGNNRRGQAFYEEMAEISGRPMIMNVVQAFDHRPDIHRRVLEWLRSCRERGIRVVGQGLTTDAGFSFTFENWNLFDDSEAWREATVGTLEERKAKLGDPARRQALKDQMPATATGPLPGIVITGPKLEKNKQWLDHTLALVAEKTGRHPVDVMLDMAVEENLETEFFAAPPNGSIEYLKEIVDDPYVLFGVSDGGAHTKFLTAGRYPTETLCK 462
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A2E5PIG4_9PROT (Amidohydro_3 domain-containing protein (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PIG4_9PROT) HSP 1 Score: 321 bits (823), Expect = 2.910e-107 Identity = 150/225 (66.67%), Postives = 184/225 (81.78%), Query Frame = 1 Query: 1 RRNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 RRNEG MQ T+ SG + D+ H++ LS+ISGRP+++NVVQA D +P++HR L WL+ CR+ G+RVYGQGLTTDAG+ FTFEDWNL+D+ PAWR AT+G+ ERL KL DP RR AL+ Q+P V GP +IV+TGP++EET+++LDHTVG VAE GKH VDAMLDI VAD L+TEFF+ PPN +LKEIVDNP+VLFGVSDGGAHTKFLTAGRYPTETLT+ Sbjct: 10 RRNEGFMQMTISSGSYQNDRAHMERLSQISGRPLLWNVVQAYDHKPEVHRSALRWLDDCRDRGVRVYGQGLTTDAGFTFTFEDWNLWDDRPAWRAATVGTVVERLEKLADPDRREALKAQVPLTVTGPIRDIVITGPRTEETEKYLDHTVGQVAEALGKHAVDAMLDIAVADKLKTEFFAAPPNVSKVHLKEIVDNPWVLFGVSDGGAHTKFLTAGRYPTETLTE 234
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A2P5VJR2_9PROT (Amidohydro_3 domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha1_Bin1 TaxID=2013065 RepID=A0A2P5VJR2_9PROT) HSP 1 Score: 324 bits (830), Expect = 5.670e-106 Identity = 151/225 (67.11%), Postives = 185/225 (82.22%), Query Frame = 1 Query: 1 RRNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 RRNEG MQ +VSGD K D+ ++E++EISGRP+I NV+QA D +PKIHR+ L WL+ CRE GIRV GQGLTTDAG+ FTFE+WNLFD+ AW EAT G+ EER AKL DPARR AL+E++P +GP EIV+ GP+ E+ QQWLDH++GLVAEKTGKH VD MLD+ V ++L+T+FF+ PPN ++YLKEIVD+PYVLFGVSDGGAHTKFLTAGRYPTET+ K Sbjct: 183 RRNEGFMQMLLVSGDNKKDRAFMEEMAEISGRPLIMNVIQAFDHKPKIHRENLKWLKSCRERGIRVVGQGLTTDAGFTFTFENWNLFDDIEAWCEATTGTLEERKAKLADPARRQALQEKMPRTAVGPLHEIVIVGPQLEKNQQWLDHSLGLVAEKTGKHPVDVMLDMAVEEDLKTDFFAAPPNGNLEYLKEIVDDPYVLFGVSDGGAHTKFLTAGRYPTETIVK 407
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A537MTU3_9PROT (Amidohydro_3 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MTU3_9PROT) HSP 1 Score: 308 bits (788), Expect = 5.220e-102 Identity = 142/224 (63.39%), Postives = 176/224 (78.57%), Query Frame = 1 Query: 4 RNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 RN+G MQ +VSGD D+ +E++ +SGRP+I NVVQA D +P IHR++L WL CRE GIRV GQGLTTDAG+ FTFEDWNLFD+ W +AT G+ EERLAKL DPARRPALR+++P GP +I + GPK ++ ++WLD+T+ AEK GKH VD MLD+ V ++L+TEFF+ PPN RIDYLKE+VD+PY+LFGVSDGGAHTKFLTAGRYPTETL K Sbjct: 16 RNDGFMQMLLVSGDNARDRAFYEEMATLSGRPIIMNVVQAFDDRPHIHRRLLYWLRSCRERGIRVVGQGLTTDAGFTFTFEDWNLFDDQQVWCDATTGTREERLAKLADPARRPALRDKLPITATGPLPQIAIVGPKLDKNRKWLDYTLAHAAEKMGKHPVDVMLDMAVEEDLKTEFFAAPPNGRIDYLKELVDDPYILFGVSDGGAHTKFLTAGRYPTETLCK 239
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Match: A0A192INH9_9HYPH (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192INH9_9HYPH) HSP 1 Score: 315 bits (806), Expect = 1.050e-101 Identity = 147/224 (65.62%), Postives = 178/224 (79.46%), Query Frame = 1 Query: 4 RNEGHMQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLEHCRENGIRVYGQGLTTDAGYAFTFEDWNLFDECPAWREATLGSHEERLAKLGDPARRPALREQIPAFVLGPFEEIVVTGPKSEETQQWLDHTVGLVAEKTGKHVVDAMLDIVVADNLETEFFSMPPNTRIDYLKEIVDNPYVLFGVSDGGAHTKFLTAGRYPTETLTK 675 RNEG MQ +VSGD K D +E++EISGRPMI NVVQA D +P+IHR+VL WL+ CRE GIRV GQGLTTDAG+ FTFE+WNLFD+ AWREAT G+ EER KL DPARR A+++Q+P GP +IV+ GP+ E+ +QW DHT+ L EK GKH VD MLD+ V ++LETEFF+ PPN +++YLKEIVD+PYVLFGVSDGGAHTKFLTAGRYPTET+ K Sbjct: 239 RNEGFMQMLLVSGDNKRDHAFYEEMAEISGRPMIMNVVQAFDHRPEIHRRVLEWLKSCRERGIRVVGQGLTTDAGFTFTFENWNLFDDSEAWREATTGTLEERKQKLADPARRQAMKDQMPQTATGPLVDIVIVGPQLEKNKQWEDHTLALAGEKMGKHPVDVMLDMAVEEDLETEFFAAPPNGKLEYLKEIVDDPYVLFGVSDGGAHTKFLTAGRYPTETICK 462 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100206.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100206.43.1 >prot_M-pyrifera_M_contig100206.43.1 ID=prot_M-pyrifera_M_contig100206.43.1|Name=mRNA_M-pyrifera_M_contig100206.43.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp MQCTMVSGDPKADQLHLQELSEISGRPMIFNVVQATDTQPKIHRKVLAWLback to top mRNA from alignment at M-pyrifera_M_contig100206:6..680+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100206.43.1 ID=mRNA_M-pyrifera_M_contig100206.43.1|Name=mRNA_M-pyrifera_M_contig100206.43.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig100206:6..680+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100206:6..680+ >mRNA_M-pyrifera_M_contig100206.43.1 ID=mRNA_M-pyrifera_M_contig100206.43.1|Name=mRNA_M-pyrifera_M_contig100206.43.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1314bp|location=Sequence derived from alignment at M-pyrifera_M_contig100206:6..680+ (Macrocystis pyrifera P11B4 male)back to top |