mRNA_M-pyrifera_M_contig100132.31.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100132.31.1
Unique NamemRNA_M-pyrifera_M_contig100132.31.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A2E2YIR3_9PROT (Hydroxyacylglutathione hydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2YIR3_9PROT)

HSP 1 Score: 67.8 bits (164), Expect = 9.400e-12
Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 1
Query:   16 EVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVL 234
            E++ IP  SDNY Y  RD+ S T V+VDP + D +L  L    +S        +THIL THHH DH GGNE L
Sbjct:    5 EIIVIPALSDNYVYIARDTESDTTVVVDPGEADPVLKALDNHGWS--------LTHILNTHHHGDHIGGNEKL 69          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A0M9G5A9_9TRYP (Lactamase_B domain-containing protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9G5A9_9TRYP)

HSP 1 Score: 68.2 bits (165), Expect = 1.520e-11
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   19 VVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDG--RPDFEVTHILTTHHHADHSGGNEVL 234
            VVP+PMFSDNYAY I    +    +VDPADP+ +L +L     S  G  R   ++T +LTTH H DH+GGNE+L
Sbjct:  161 VVPVPMFSDNYAYFIISMQTQKVAVVDPADPEMVLRFLR----SLRGLLRVPLQLTDVLTTHKHWDHAGGNELL 230          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: UPI00066258D3 (hydroxyacylglutathione hydrolase n=1 Tax=Acidisphaera rubrifaciens TaxID=50715 RepID=UPI00066258D3)

HSP 1 Score: 66.6 bits (161), Expect = 1.820e-11
Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 1
Query:   19 VVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVLGA 240
            V P+P+ SDNYA+ +RD+AS T  +VDPAD DAIL  L       D R    +  IL THHHADH  G + + A
Sbjct:    5 VEPVPILSDNYAWLLRDAASGTVAIVDPADADAILAAL-------DARTGGRLDLILLTHHHADHVAGTDAVRA 71          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A261Y2L0_9FUNG (Hydroxyacylglutathione hydrolase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y2L0_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 4.480e-11
Identity = 32/77 (41.56%), Postives = 43/77 (55.84%), Query Frame = 1
Query:   13 LEVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVLGAM 243
            +++ P+P+  DNYAY I D  S     VDP +P  +L  L  G           +T ILTTHHHADH+GGN+ L  +
Sbjct:    1 MQITPVPVLQDNYAYVITDERSQIAAAVDPVEPRKVLAALDPGT---------RLTSILTTHHHADHAGGNKELTGL 68          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A5A8DS69_CAFRO (Lactamase_B domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DS69_CAFRO)

HSP 1 Score: 66.2 bits (160), Expect = 4.520e-11
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 1
Query:   28 IPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNE 228
            +P+F DNY+Y + D+ +    LVDPADP  +L   +T   ++     FE+T I TTHHH DHSGGNE
Sbjct:    2 VPIFDDNYSYIVTDTVAQVSALVDPADPGPVLDAWSTLAQAEQA---FELTAIWTTHHHHDHSGGNE 65          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: UPI001C17A512 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C17A512)

HSP 1 Score: 62.4 bits (150), Expect = 5.930e-11
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 1
Query:   13 LEVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVL 234
            ++V+PIP+  DNY+Y + D  +    +VDPA+P+ +L  +     +        + H++TTHHH DHSGGN  L
Sbjct:    1 MKVIPIPVLQDNYSYLVIDEKTNEAAVVDPAEPEKVLEVVKNQGVN--------LKHLITTHHHVDHSGGNTKL 66          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A0V1E158_TRIPS (E3 ubiquitin-protein ligase makorin-1 n=2 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1E158_TRIPS)

HSP 1 Score: 66.2 bits (160), Expect = 7.340e-11
Identity = 31/77 (40.26%), Postives = 42/77 (54.55%), Query Frame = 1
Query:   13 LEVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVLGAM 243
            L V+P+P  SDNY Y + D       +VDP +P  IL  L     +        +TH+L THHH+DH+GGNE L  +
Sbjct:   27 LTVIPVPALSDNYMYVLTDEERTAAAVVDPVEPKKILNVLKQNNLT--------LTHVLVTHHHSDHAGGNEELSNL 95          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A6G0XH72_9STRA (Lactamase_B domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XH72_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 7.710e-11
Identity = 39/78 (50.00%), Postives = 44/78 (56.41%), Query Frame = 1
Query:    7 PWLEVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVLGA 240
            P L V  +PMF DNY Y + D A+   V VDPA P   L  L     S+ GR   E   ILTTH HADH+GGNE L A
Sbjct:   60 PHLRVRLVPMFDDNYGYLVIDEANQHVVAVDPAQPSTFLPALEE-ELSKSGR---EFLGILTTHGHADHTGGNETLAA 133          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A8G2BJT2_9PROT (Hydroxyacylglutathione hydrolase n=1 Tax=Thalassobaculum litoreum DSM 18839 TaxID=1123362 RepID=A0A8G2BJT2_9PROT)

HSP 1 Score: 65.1 bits (157), Expect = 9.490e-11
Identity = 34/79 (43.04%), Postives = 45/79 (56.96%), Query Frame = 1
Query:    4 LPWLEVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVLGA 240
            +P LE+V +P  SDNY Y + D+AS    +VDP +   +   LA           +++THIL THHHADH  GNE L A
Sbjct:    1 MPALEIVLVPALSDNYVYLLHDAASGATAVVDPGEAAPVEAALA--------ERGWKLTHILNTHHHADHIDGNEALKA 71          
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Match: A0A148N8N6_9GAMM (Hydroxyacylglutathione hydrolase n=1 Tax=Methylothermaceae bacteria B42 TaxID=1798802 RepID=A0A148N8N6_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 9.490e-11
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 1
Query:   13 LEVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFSQDGRPDFEVTHILTTHHHADHSGGNEVL 234
            LE++ IP+ SDNY Y + D  S    +VDPA P+ +L+ L T  +         +THI  THHH DH G NEVL
Sbjct:    2 LEIIQIPVLSDNYVYLLHDPDSGMTAVVDPAVPEPVLSVLETRGW--------RLTHIFNTHHHWDHVGANEVL 67          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100132.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2YIR3_9PROT9.400e-1247.95Hydroxyacylglutathione hydrolase n=1 Tax=Rhodospir... [more]
A0A0M9G5A9_9TRYP1.520e-1150.00Lactamase_B domain-containing protein n=1 Tax=Lept... [more]
UPI00066258D31.820e-1148.65hydroxyacylglutathione hydrolase n=1 Tax=Acidispha... [more]
A0A261Y2L0_9FUNG4.480e-1141.56Hydroxyacylglutathione hydrolase n=1 Tax=Bifigurat... [more]
A0A5A8DS69_CAFRO4.520e-1147.76Lactamase_B domain-containing protein n=3 Tax=Cafe... [more]
UPI001C17A5125.930e-1137.84Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A0V1E158_TRIPS7.340e-1140.26E3 ubiquitin-protein ligase makorin-1 n=2 Tax=Tric... [more]
A0A6G0XH72_9STRA7.710e-1150.00Lactamase_B domain-containing protein n=1 Tax=Apha... [more]
A0A8G2BJT2_9PROT9.490e-1143.04Hydroxyacylglutathione hydrolase n=1 Tax=Thalassob... [more]
A0A148N8N6_9GAMM9.490e-1144.59Hydroxyacylglutathione hydrolase n=1 Tax=Methyloth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100132contigM-pyrifera_M_contig100132:89..473 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score71.6
Seed ortholog evalue1.9e-10
Seed eggNOG ortholog5664.LmjF.34.3420
Preferred namePNKD
KEGG rclassRC00004,RC00137
KEGG koko:K01069
KEGG ReactionR01736
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0008150,GO:0010646,GO:0010648,GO:0016020,GO:0019222,GO:0023051,GO:0023057,GO:0031323,GO:0032225,GO:0032501,GO:0032879,GO:0033238,GO:0042053,GO:0042069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0046928,GO:0046929,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050804,GO:0050805,GO:0050877,GO:0050884,GO:0050905,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051171,GO:0051588,GO:0051589,GO:0060341,GO:0065007,GO:0065008,GO:0080090,GO:0099177,GO:1903530,GO:1903531
EggNOG free text desc.Metallo-beta-lactamase superfamily
EggNOG OGs3XT24@5653,COG0491@1,KOG0813@2759
EC3.1.2.6
COG Functional cat.S
Best tax levelKinetoplastida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size243
Cds size243
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815496.1585126-CDS-M-pyrifera_M_contig100132:88..1571622815496.1585126-CDS-M-pyrifera_M_contig100132:88..157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100132 89..157 -
1692277438.1058443-CDS-M-pyrifera_M_contig100132:88..1571692277438.1058443-CDS-M-pyrifera_M_contig100132:88..157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100132 89..157 -
1622815496.1735356-CDS-M-pyrifera_M_contig100132:299..4731622815496.1735356-CDS-M-pyrifera_M_contig100132:299..473Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100132 300..473 -
1692277438.1295183-CDS-M-pyrifera_M_contig100132:299..4731692277438.1295183-CDS-M-pyrifera_M_contig100132:299..473Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100132 300..473 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100132.31.1prot_M-pyrifera_M_contig100132.31.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100132 89..473 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100132.31.1

>prot_M-pyrifera_M_contig100132.31.1 ID=prot_M-pyrifera_M_contig100132.31.1|Name=mRNA_M-pyrifera_M_contig100132.31.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
VLPWLEVVPIPMFSDNYAYSIRDSASCTQVLVDPADPDAILTYLATGPFS
QDGRPDFEVTHILTTHHHADHSGGNEVLGAM
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mRNA from alignment at M-pyrifera_M_contig100132:89..473-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100132.31.1 ID=mRNA_M-pyrifera_M_contig100132.31.1|Name=mRNA_M-pyrifera_M_contig100132.31.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=385bp|location=Sequence derived from alignment at M-pyrifera_M_contig100132:89..473- (Macrocystis pyrifera P11B4 male)
GTGTTGCCCTGGCTGGAGGTGGTCCCAATCCCGATGTTTTCGGACAATTA TGCCTACTCGATTCGTGACTCTGCCTCATGCACGCAAGTCCTGGTAGACC CCGCAGATCCTGACGCTATTCTCACATATCTGGCGACAGGGCCCTTTTCC CAAGACGGAAGGCCAGATTTTGAAGTACGTATTGCTTATTTTTTTCTTTC TATTTTTCTTTGGAAGAGGTATTGGGAGTTGTTGTTGTTTTCATCAACAA TTTGAGTGAACAATGTGCAACAACAACCACAACAACCTTCCCTTTCCTTT TCTTCCTTCACACCAGGTAACTCATATCTTAACAACACACCATCATGCGG ATCACAGTGGAGGCAATGAGGTGCTTGGTGCGATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100132:89..473-

>mRNA_M-pyrifera_M_contig100132.31.1 ID=mRNA_M-pyrifera_M_contig100132.31.1|Name=mRNA_M-pyrifera_M_contig100132.31.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig100132:89..473- (Macrocystis pyrifera P11B4 male)
GTGTTGCCCTGGCTGGAGGTGGTCCCAATCCCGATGTTTTCGGACAATTA
TGCCTACTCGATTCGTGACTCTGCCTCATGCACGCAAGTCCTGGTAGACC
CCGCAGATCCTGACGCTATTCTCACATATCTGGCGACAGGGCCCTTTTCC
CAAGACGGAAGGCCAGATTTTGAAGTGTTGCCCTGGCTGGAGGTGGTCCC
AATCCCGATGTTTTCGGACAATTATGCCTACTCGATTCGTGACTCTGCCT
CATGCACGCAAGTCCTGGTAGACCCCGCAGATCCTGACGCTATTCTCACA
TATCTGGCGACAGGGCCCTTTTCCCAAGACGGAAGGCCAGATTTTGAAGT
AACTCATATCTTAACAACACACCATCATGCGGATCACAGTGGAGGCAATG
AGGTGCTTGGTGCGATGGTAACTCATATCTTAACAACACACCATCATGCG
GATCACAGTGGAGGCAATGAGGTGCTTGGTGCGATG
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