mRNA_M-pyrifera_M_contig100115.27.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A5A8E5A5_CAFRO (Serine--tRNA ligase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E5A5_CAFRO) HSP 1 Score: 290 bits (742), Expect = 1.010e-91 Identity = 141/210 (67.14%), Postives = 163/210 (77.62%), Query Frame = 1 Query: 22 EDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRF-IPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTR 645 E G +KYLIATSEQP+C FH + L ++P +YAGWS+CFRKEAGS GRD GIFRVHQFEKIEQF V P +SW +H+EM TA FYK+LGI Y V+ +VS ELN+AAA+K DLEGWFP EYRELVSCSNCTDYQARA+ETRF K G K Y H LNSTLCATTRTICAILEN+QT +G++VPEALVPY+G F+PF R Sbjct: 248 EKGDSEKYLIATSEQPLCTFHRGDWLNPKDLPVKYAGWSTCFRKEAGSHGRDTWGIFRVHQFEKIEQFVVCAPEDSWRIHEEMIATAEEFYKSLGIAYRVITLVSKELNNAAAKKYDLEGWFPGFSEYRELVSCSNCTDYQARAMETRFGAKTKADNGVKTYAHMLNSTLCATTRTICAILENYQTPDGVKVPEALVPYMGGTTFLPFVR 457
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A152A6B6_9MYCE (Serine--tRNA ligase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6B6_9MYCE) HSP 1 Score: 281 bits (718), Expect = 3.670e-90 Identity = 132/203 (65.02%), Postives = 158/203 (77.83%), Query Frame = 1 Query: 37 DKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGKEFIPFTR 645 +KYLIATSEQP+ FH E L E ++P +Y G+S+CFRKEAGSSG+D GIFRVHQFEKIEQFC+T P +SWDMH+EM A AFY+ LG+PY VV IVS LN+AAA+K DLEGWFP G YRELVSCSNCTDYQ+R +E R K + +K Y H LNSTL ATTR IC ILEN+QT +GI VP+ALVPY+G +F+PF + Sbjct: 236 EKYLIATSEQPISAFHRGEWLEEKQLPLKYLGYSTCFRKEAGSSGKDTWGIFRVHQFEKIEQFCITEPEKSWDMHEEMLANAEAFYQELGLPYRVVSIVSGALNNAAAKKYDLEGWFPGYGTYRELVSCSNCTDYQSRDLEIRCGTKKAGQTQKKYVHMLNSTLAATTRVICCILENYQTDKGINVPKALVPYLGMDFLPFVK 438
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: I3TA49_LOTJA (Serine--tRNA ligase n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3TA49_LOTJA) HSP 1 Score: 272 bits (695), Expect = 1.690e-89 Identity = 132/209 (63.16%), Postives = 156/209 (74.64%), Query Frame = 1 Query: 34 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGE--SWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 651 DDKYLIAT+EQP+C +HL + + +++P RYAG+SSCFRKEAGS GRD GIFRVHQFEK+EQFC+T P + SWDMH+EM + FYK L IPY VV IVS LN AAA+K DLE WFPA+ YRELVSCSNCTDYQAR +E R+ K + K Y H LNSTL AT RTIC ILEN+Q +G+ +PEAL PY+G K FIPF P Sbjct: 22 DDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKELNIPYRVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIRYGQRKSNEQLKQYVHLLNSTLTATERTICCILENNQKDDGVEIPEALRPYMGGKSFIPFKNQP 230
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: L8GI72_ACACA (Serine--tRNA ligase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GI72_ACACA) HSP 1 Score: 278 bits (711), Expect = 6.210e-89 Identity = 135/205 (65.85%), Postives = 162/205 (79.02%), Query Frame = 1 Query: 34 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGK-EFIPFTR 645 D+KYLIATSEQP+ FH +E L ++P RYAG SSCFRKEAG+ G+D GIFRVHQFEKIEQFC+T P +SW+ H+ M TA AFY++L +PYHVV IVS ELN+AAA+KLDLE WFPA GE+RELVS SNCTDYQ+R++E R K+ GEK Y H LN+TLCATTRTIC ILEN+QT EG+ VP+ L PY+G EFIPF + Sbjct: 233 DEKYLIATSEQPISAFHAEEWLEPKDLPIRYAGTSSCFRKEAGAHGKDTWGIFRVHQFEKIEQFCLTEPEKSWEEHENMVKTAEAFYQSLELPYHVVAIVSGELNNAAAKKLDLEAWFPAFGEFRELVSASNCTDYQSRSLEVRCGSRKQ-GGEKKYVHMLNATLCATTRTICCILENYQTPEGVAVPKVLQPYLGGLEFIPFVK 436
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A7S0BR21_9RHOD (Serine--tRNA ligase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BR21_9RHOD) HSP 1 Score: 270 bits (691), Expect = 7.830e-89 Identity = 131/212 (61.79%), Postives = 162/212 (76.42%), Query Frame = 1 Query: 28 GADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRP--GESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEV-KGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 651 G +KYLIATSEQP+ +H+ + + +PK+Y G+S+CFRKEAGS GRD GIFRVHQFEKIEQFC+T P ESWD H++M + F+++LGIPY VV IVS LN+AAA+KLDLEGW+PA YRELVSCSNCTDYQ+R ++TRF NK +GEK + H LNSTLCATTR ICAILENHQT +G+ +PE L Y+G KE + F+R P Sbjct: 22 GVTEKYLIATSEQPIAAYHVDDWVDPKTLPKKYVGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCLTSPDDNESWDAHEDMIKASEEFHQSLGIPYRVVSIVSGALNNAAAKKLDLEGWYPAGSAYRELVSCSNCTDYQSRRLQTRFGSNKRGDQGEKKFVHMLNSTLCATTRVICAILENHQTDKGVVIPEPLRVYMGGKELMEFSRAP 233
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: F0ZTM5_DICPU (Serine--tRNA ligase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZTM5_DICPU) HSP 1 Score: 277 bits (709), Expect = 7.870e-89 Identity = 138/215 (64.19%), Postives = 160/215 (74.42%), Query Frame = 1 Query: 1 GGKGEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGKEFIPFTR 645 G GEE E KYLIATSEQP+ FH E L E E+PKRY G+S+CFRKEAGSSGRD GIFRVHQFEKIEQFCVT P +SWDM +EM + FY+ LGIPY VV+IVS LN+AA++K DLEGWFP YRELVSCSNCTDYQ+R +E R K+ + +K Y H LNSTL ATTR IC ILEN+QT GI VPE L P++GK+FIPF + Sbjct: 227 GAAGEENE-----KYLIATSEQPISAFHRGEWLDEKELPKRYVGYSTCFRKEAGSSGRDTWGIFRVHQFEKIEQFCVTEPEKSWDMMEEMISNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNTYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTEGGITVPEPLRPFLGKDFIPFVK 436
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: UPI000D62E803 (serine--tRNA ligase-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62E803) HSP 1 Score: 270 bits (689), Expect = 1.930e-88 Identity = 125/209 (59.81%), Postives = 156/209 (74.64%), Query Frame = 1 Query: 34 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPG--ESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 651 DDKYLIAT+EQP+C +H+ + + ++P RYAG+SSCFRKEAGS GRD GIFRVHQFEK+EQFC+T P +SW+MH+EM + FY+ L +PYH+V IVS LN AAA+K DLE WFPA+ YRELVSCSNCTDYQ+R +E RF K + K YCH LNSTL AT RT+C ILEN+Q +G+ +PE L P++G K F+PF P Sbjct: 27 DDKYLIATAEQPLCAYHIDDWIHPTQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWEMHEEMIKNSEEFYQMLKLPYHIVSIVSGALNDAAAKKYDLEAWFPASSTYRELVSCSNCTDYQSRKLEIRFGQKKSNEQMKQYCHLLNSTLTATERTMCCILENYQREDGVEIPEVLQPFMGGKTFMPFQAPP 235
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A8K0MQK5_9ROSA (Uncharacterized protein n=2 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MQK5_9ROSA) HSP 1 Score: 275 bits (704), Expect = 5.000e-88 Identity = 132/209 (63.16%), Postives = 160/209 (76.56%), Query Frame = 1 Query: 34 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPG--ESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 651 DDKYLIAT+EQP+C +HL + + +++P RYAG+SSCFRKEAGS GRD GIFRVHQFEK+EQFC+T P +SWDMH+EM + FYK L IPY VV IVS LN AAA+K DLEGWFPA+ YRELVSCSNCTDYQ+R +E R+ NK+ + KLY H LNSTL AT RTIC ILEN+Q +G+ +PEAL P++G K F+PF P Sbjct: 228 DDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRLEIRYGQNKKNEQTKLYVHLLNSTLTATERTICCILENNQKEDGVEIPEALRPFMGGKTFLPFKSKP 436
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A0G4ERX4_VITBC (Serine--tRNA ligase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERX4_VITBC) HSP 1 Score: 275 bits (703), Expect = 1.790e-87 Identity = 132/211 (62.56%), Postives = 158/211 (74.88%), Query Frame = 1 Query: 10 GEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPF 639 GE+E DG D +LIATSEQP+ FH + LR E PKRYAG S+CFRKEAGSSG+D+ GIFRVHQFEK+EQFC+T P ESW MH+EM A FY++L +PY V+ IVS LN AAA+K DLE WFP YRELVSCSNCTDYQAR +E R K + EK YCH LN+TL A+ RT+C ILEN+QT G+RVP L+PY+G +EF+PF Sbjct: 238 GEKESDGTPDMFLIATSEQPISAFHRGDWLRPDECPKRYAGVSTCFRKEAGSSGKDMWGIFRVHQFEKVEQFCITSPEESWAMHEEMIGIAEEFYQSLELPYQVIAIVSGALNDAAAKKYDLEAWFPGYETYRELVSCSNCTDYQARQLEVRHGQKKSGEREKKYCHMLNATLVASQRTMCCILENYQTPTGVRVPRVLIPYMGGEEFLPF 448
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A8J4Q5C8_9MYCE (Serine--tRNA ligase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q5C8_9MYCE) HSP 1 Score: 273 bits (699), Expect = 2.680e-87 Identity = 135/214 (63.08%), Postives = 161/214 (75.23%), Query Frame = 1 Query: 4 GKGEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGKEFIPFTR 645 G+GE+ E KYLIATSEQP+ +H +E + E E+PK+YAG+S+ FRKEAGSSG+D GIFRVHQFEKIEQFC+T P +SWDM EM A AFY+ LG+PY VV+IVS LN+AAARK DLE WFP EYRELVSCSNCTDYQ+R +E R K+ + +K Y H LNSTL ATTR IC ILEN+QT GI VP L PY+G +FIPFT+ Sbjct: 226 GEGEDNE-----KYLIATSEQPISAYHRREWIEEKELPKKYAGYSTNFRKEAGSSGKDNWGIFRVHQFEKIEQFCITEPEKSWDMQDEMLGNAEAFYQELGLPYRVVNIVSGALNNAAARKYDLECWFPGYNEYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTEGGINVPTPLRPYLGMDFIPFTK 434 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100115.27.1 >prot_M-pyrifera_M_contig100115.27.1 ID=prot_M-pyrifera_M_contig100115.27.1|Name=mRNA_M-pyrifera_M_contig100115.27.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp GGKGEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRback to top mRNA from alignment at M-pyrifera_M_contig100115:8..661- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100115.27.1 ID=mRNA_M-pyrifera_M_contig100115.27.1|Name=mRNA_M-pyrifera_M_contig100115.27.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig100115:8..661- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100115:8..661- >mRNA_M-pyrifera_M_contig100115.27.1 ID=mRNA_M-pyrifera_M_contig100115.27.1|Name=mRNA_M-pyrifera_M_contig100115.27.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig100115:8..661- (Macrocystis pyrifera P11B4 male)back to top |