mRNA_M-pyrifera_M_contig100103.24.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100103.24.1
Unique NamemRNA_M-pyrifera_M_contig100103.24.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A7S2TRK1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRK1_9EUKA)

HSP 1 Score: 252 bits (643), Expect = 6.560e-81
Identity = 123/186 (66.13%), Postives = 151/186 (81.18%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALATI 558
            KYI GHSDVV+G V  ND ++Y+ LKF+QN IGAVP P DCY+ALRGLKTL +RM+RH  NA+ +A+ LE HPKV  V YPGL+SHPQH+VA+ QMR +GGMVT  +KGG++ +R+FLENLK+F LAESLGAVESLAE PAIMTHA+V P+ R  +GI D LVRLSVG+ED+ DL RD++ ALA I
Sbjct:  127 KYINGHSDVVMGVVATNDAKIYEKLKFLQNSIGAVPAPFDCYMALRGLKTLEVRMQRHTHNAMIVAQFLEAHPKVAKVIYPGLKSHPQHQVARSQMRLWGGMVTFFLKGGIKESRQFLENLKVFALAESLGAVESLAEHPAIMTHAAVPPDQRKKLGISDSLVRLSVGIEDVNDLVRDLKQALAAI 312
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A2D4CA05_PYTIN (Cystathionine gamma-lyase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CA05_PYTIN)

HSP 1 Score: 254 bits (649), Expect = 9.450e-81
Identity = 126/187 (67.38%), Postives = 147/187 (78.61%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALATIP 561
            KYI GHSDVV+G V+ N E++Y  LKF+QNGIGAVP P D Y+ALRGLKTLH+RM  H  NA A+A+ LEKHP V  V YPGL SHPQH +AKKQ RGFGGM+T  +KGGLE AR FLE +++F LAESLGAVESLAESPAIMTHASV  EHR  +GI D+L+RLSVG+E L D+  D+E ALA  P
Sbjct:  214 KYINGHSDVVMGVVITNSEDIYTKLKFVQNGIGAVPSPFDAYMALRGLKTLHVRMATHAKNAQAVAEFLEKHPNVEKVIYPGLPSHPQHAIAKKQARGFGGMITFYIKGGLEKARAFLETVEVFTLAESLGAVESLAESPAIMTHASVPKEHREKLGISDNLIRLSVGIEGLPDIIADLEKALAAEP 400
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A8K1FBU0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBU0_PYTOL)

HSP 1 Score: 254 bits (648), Expect = 1.540e-80
Identity = 126/187 (67.38%), Postives = 147/187 (78.61%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALATIP 561
            KYI GHSDVV+G V+ N EE++  +KF+QNGIGAVP P D Y+ALRGLKTLH+RM  H  NA A+A+ LEKHP V  V YPGL SHPQH +AKKQ RGFGGM+T  VKGGLE AR FLE +++F LAESLGAVESLAESPAIMTHASV  EHR  +GI D+L+RLSVG+E L D+  D+E ALA  P
Sbjct:  217 KYINGHSDVVMGVVITNSEEIHTKIKFVQNGIGAVPSPFDAYMALRGLKTLHVRMATHAKNAQAVAEYLEKHPNVEKVIYPGLPSHPQHAIAKKQARGFGGMITFYVKGGLEKARAFLETVEVFTLAESLGAVESLAESPAIMTHASVPKEHRELVGISDNLIRLSVGIEGLPDIIADLEKALAAEP 403
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A2E7GEM7_9PROT (Cystathionine gamma-synthase n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E7GEM7_9PROT)

HSP 1 Score: 252 bits (643), Expect = 4.640e-80
Identity = 123/186 (66.13%), Postives = 146/186 (78.49%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALATI 558
            KY+ GHSDVV G V+ ND   Y+ +KFIQN  GAVPGP DC+L +RGLKTLH+RM+RH  NA+ IA+ LE HPKV  V YPGLESHPQH +AKKQM GFGGM++  +KGGLE +R FLEN+K+F LAESLG VESL E PAIMTHASV  E+R A+GI D L+R+SVG+EDL DLQ D+ESA   I
Sbjct:  200 KYMNGHSDVVGGIVVTNDTSFYESVKFIQNSAGAVPGPWDCFLVMRGLKTLHIRMQRHEENAMQIAQFLENHPKVEKVIYPGLESHPQHSLAKKQMSGFGGMISFVIKGGLEASRTFLENVKLFTLAESLGGVESLIEHPAIMTHASVPKENREALGISDGLIRISVGIEDLNDLQDDLESAFEFI 385
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: UPI0019B0332C (Cystathionine gamma-synthase n=1 Tax=Cryobacterium sp. TaxID=1926290 RepID=UPI0019B0332C)

HSP 1 Score: 251 bits (640), Expect = 1.570e-79
Identity = 122/183 (66.67%), Postives = 148/183 (80.87%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESAL 549
            KY+ GHSDVV G ++ ++ E+YD LKF+QN IGAVP P+DC+L +RGLKTLH+RMERH  NA  +A+ LEKHPKV  V YPGL+SHPQHE+AKKQM GFGGM+T   KGGL  AR FLE +K+F LAESLG VESL E PAIMTHAS+ PE+R A+GI D+LVR+SVG+EDLADL  D++ AL
Sbjct:  208 KYMNGHSDVVGGALITSNSELYDQLKFLQNAIGAVPAPMDCFLVMRGLKTLHVRMERHAQNAQKVAEYLEKHPKVERVIYPGLKSHPQHELAKKQMSGFGGMITFFTKGGLPEARGFLERVKLFTLAESLGGVESLIEHPAIMTHASIPPENRKALGIHDNLVRVSVGIEDLADLIADLDQAL 390
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A662XWZ1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWZ1_9STRA)

HSP 1 Score: 250 bits (638), Expect = 4.820e-79
Identity = 130/187 (69.52%), Postives = 146/187 (78.07%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALATIP 561
            KYI GHSDVV+G V+ NDE +   L+F+QN IGAVP P DCYLALRGLKTLH+RM  H  NA AIA+ LE HP V  V YPGL+SHPQHE+AKKQ  GFGGMVT  V+GGL+ AR FLENL+IF LAESLGAVESLAESPAIMTHASV  E R  IGI D+L+RLSVG+E L DL  D+E ALA  P
Sbjct:  216 KYINGHSDVVMGVVVTNDESINTKLRFVQNDIGAVPSPFDCYLALRGLKTLHVRMAAHAKNAQAIAEYLEAHPAVEKVYYPGLKSHPQHEIAKKQASGFGGMVTFYVRGGLDKARSFLENLEIFTLAESLGAVESLAESPAIMTHASVPAEIRKEIGISDNLIRLSVGIEGLPDLIVDLERALAAEP 402
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A1F3T184_9PROT (Cystathionine gamma-synthase n=1 Tax=Bdellovibrionales bacterium GWB1_55_8 TaxID=1797386 RepID=A0A1F3T184_9PROT)

HSP 1 Score: 247 bits (630), Expect = 4.130e-78
Identity = 120/183 (65.57%), Postives = 145/183 (79.23%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESAL 549
            KY+ GHSDVV G +  +++E+Y  LKF+QN IGAVPGP DC+L +RGLKTLH+RMERH +NA+AIAK LEKHPK+  V YPGLESHPQH VA+KQM GFGGM+T  +KGGL  AR FLE ++IF LAESLG VESL E PAIMTHASV  E R  +GI D+LVR+S G+ED+ DL  D++ AL
Sbjct:  201 KYMNGHSDVVGGVIATSNDEVYKELKFLQNSIGAVPGPFDCFLVMRGLKTLHVRMERHASNAMAIAKYLEKHPKIERVIYPGLESHPQHAVARKQMSGFGGMITFFIKGGLPEARSFLEKVRIFALAESLGGVESLIEHPAIMTHASVPAETRKTLGIHDNLVRISAGIEDVKDLLADLDQAL 383
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: K3WPJ6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WPJ6_GLOUD)

HSP 1 Score: 247 bits (630), Expect = 7.320e-78
Identity = 125/187 (66.84%), Postives = 145/187 (77.54%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALATIP 561
            KYI GHSDVV+G V+ N EE+   L+FIQNGIGAVP P D Y+ALRGLKTLH+RM  H  NA A+A+ LE HP+V  V YPGL SHPQH +AKKQ +GFGGMVT  +KGGLE AR FLE ++IF LAESLGAVESLAESPAIMTHASV  EHR  +GI D+L+RLSVG+E L D+  D+E AL   P
Sbjct:  215 KYINGHSDVVMGVVITNSEEINTKLRFIQNGIGAVPSPFDAYMALRGLKTLHVRMAAHAKNAQAVAEFLEAHPQVEKVYYPGLPSHPQHAIAKKQAKGFGGMVTFYIKGGLEKARAFLETVEIFTLAESLGAVESLAESPAIMTHASVPKEHREKLGISDNLIRLSVGIEGLPDIIADLEKALVAEP 401
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A7J7KKI8_BUGNE (Cystathionine gamma-lyase n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KKI8_BUGNE)

HSP 1 Score: 241 bits (615), Expect = 7.970e-78
Identity = 116/184 (63.04%), Postives = 143/184 (77.72%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALA 552
            KYI GH+DV++G VM ++E + + + F+QN IG VP P DCY+  RG+KTLHLRM  H  NALA+AK LEK+P+V  V +PGLESHPQHE+AK QM+GF GM+T  +KGG++ A KFL+++KIF LAESLG  ESL E PAIMTHASV  EHR A+GI D L+RLSVG+EDL DL  DIE ALA
Sbjct:   48 KYINGHTDVIMGAVMTSNEALAEQIGFLQNSIGTVPSPFDCYMVNRGVKTLHLRMREHQKNALAVAKALEKNPRVTKVLHPGLESHPQHELAKSQMKGFSGMITFYIKGGVKEATKFLQSVKIFCLAESLGGYESLCEHPAIMTHASVPAEHREALGISDSLIRLSVGIEDLDDLLNDIEQALA 231
[Close]
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Match: A0A0P1ABN2_PLAHL (Cystathionine gamma-lyase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABN2_PLAHL)

HSP 1 Score: 246 bits (627), Expect = 1.100e-77
Identity = 124/184 (67.39%), Postives = 144/184 (78.26%), Query Frame = 1 
Query:    1 KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKTLHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFGGMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAPEHRAAIGIFDDLVRLSVGVEDLADLQRDIESALA 552
            KYI GHSDVV G V+ N E++   L+FIQNGIGAVP P DCY+ALRGLKTLHLRM  H  NA A+A+ LEKHP V  V YPGL+SHPQHE+AKKQ  GF GMVT  ++GG+E AR FLENL++F LAESLGAVESLAESPAIMTHASV  E R  IGI D L+RLSVG+E L D+  D++ AL+
Sbjct:  198 KYINGHSDVVGGVVITNSEDINTKLRFIQNGIGAVPSPFDCYMALRGLKTLHLRMATHAKNAQAVAEYLEKHPAVEKVCYPGLKSHPQHEIAKKQASGFSGMVTFYIRGGIEKARSFLENLQVFTLAESLGAVESLAESPAIMTHASVPEEVRKEIGISDSLIRLSVGIEGLPDIIADLDRALS 381
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100103.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2TRK1_9EUKA6.560e-8166.13Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A2D4CA05_PYTIN9.450e-8167.38Cystathionine gamma-lyase n=1 Tax=Pythium insidios... [more]
A0A8K1FBU0_PYTOL1.540e-8067.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2E7GEM7_9PROT4.640e-8066.13Cystathionine gamma-synthase n=1 Tax=Bdellovibrion... [more]
UPI0019B0332C1.570e-7966.67Cystathionine gamma-synthase n=1 Tax=Cryobacterium... [more]
A0A662XWZ1_9STRA4.820e-7969.52Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A1F3T184_9PROT4.130e-7865.57Cystathionine gamma-synthase n=1 Tax=Bdellovibrion... [more]
K3WPJ6_GLOUD7.320e-7866.84Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A7J7KKI8_BUGNE7.970e-7863.04Cystathionine gamma-lyase n=1 Tax=Bugula neritina ... [more]
A0A0P1ABN2_PLAHL1.100e-7767.39Cystathionine gamma-lyase n=1 Tax=Plasmopara halst... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100103contigM-pyrifera_M_contig100103:2..574 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.1
Seed ortholog evalue1.3e-65
Seed eggNOG ortholog67593.Physo109222
Preferred nameCTH
KEGG rclassRC00056,RC00069,RC00348,RC00382,RC00710,RC01209,RC01210,RC01245,RC02303
KEGG koko:K01758
KEGG ReactionR00782,R01001,R02408,R04770,R04930,R09366
KEGG Pathwayko00260,ko00270,ko00450,ko01100,ko01130,ko01230,map00260,map00270,map00450,map01100,map01130,map01230
KEGG ModuleM00338
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0000098,GO:0001558,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006464,GO:0006518,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0008285,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009403,GO:0009404,GO:0009889,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0018065,GO:0018193,GO:0018205,GO:0018272,GO:0018352,GO:0019184,GO:0019219,GO:0019222,GO:0019343,GO:0019344,GO:0019346,GO:0019538,GO:0019748,GO:0019752,GO:0019842,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030170,GO:0030308,GO:0030968,GO:0031323,GO:0031326,GO:0033554,GO:0034097,GO:0034620,GO:0034641,GO:0034976,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0040008,GO:0042127,GO:0042221,GO:0042398,GO:0042802,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044524,GO:0044540,GO:0044550,GO:0045595,GO:0045597,GO:0045926,GO:0046394,GO:0046395,GO:0047982,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050662,GO:0050667,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051128,GO:0051147,GO:0051149,GO:0051150,GO:0051152,GO:0051171,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051252,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0060255,GO:0060548,GO:0065003,GO:0065007,GO:0065009,GO:0070279,GO:0070813,GO:0070814,GO:0070887,GO:0071265,GO:0071266,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0080090,GO:0080146,GO:0097159,GO:0098600,GO:0098606,GO:0098607,GO:1901342,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1902531,GO:1902533,GO:1903506,GO:1904018,GO:1904829,GO:1904831,GO:1905063,GO:1905065,GO:1990823,GO:1990830,GO:2000026,GO:2000112,GO:2001141,GO:2001233,GO:2001234
EggNOG free text desc.Cys/Met metabolism PLP-dependent enzyme
EggNOG OGs3QB35@4776,COG0626@1,KOG0053@2759
EC4.4.1.1
COG Functional cat.E
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons1
Model size573
Cds size573
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815495.715622-CDS-M-pyrifera_M_contig100103:1..5741622815495.715622-CDS-M-pyrifera_M_contig100103:1..574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100103 2..574 +
1692277437.9314115-CDS-M-pyrifera_M_contig100103:1..5741692277437.9314115-CDS-M-pyrifera_M_contig100103:1..574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100103 2..574 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100103.24.1prot_M-pyrifera_M_contig100103.24.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100103 2..574 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100103.24.1

>prot_M-pyrifera_M_contig100103.24.1 ID=prot_M-pyrifera_M_contig100103.24.1|Name=mRNA_M-pyrifera_M_contig100103.24.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp
KYIGGHSDVVIGCVMVNDEEMYDGLKFIQNGIGAVPGPLDCYLALRGLKT
LHLRMERHNANALAIAKELEKHPKVISVAYPGLESHPQHEVAKKQMRGFG
GMVTLRVKGGLEGARKFLENLKIFVLAESLGAVESLAESPAIMTHASVAP
EHRAAIGIFDDLVRLSVGVEDLADLQRDIESALATIPAEE*
back to top

mRNA from alignment at M-pyrifera_M_contig100103:2..574+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100103.24.1 ID=mRNA_M-pyrifera_M_contig100103.24.1|Name=mRNA_M-pyrifera_M_contig100103.24.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig100103:2..574+ (Macrocystis pyrifera P11B4 male)
AAGTATATTGGTGGCCACTCTGATGTCGTCATTGGATGTGTGATGGTGAA
TGATGAAGAGATGTATGATGGATTGAAGTTCATCCAGAACGGAATTGGTG
CTGTGCCTGGACCCCTGGATTGCTACCTTGCATTGCGTGGACTCAAAACT
CTTCATCTTCGCATGGAGAGGCACAACGCAAACGCCTTGGCAATTGCAAA
AGAACTCGAAAAGCATCCCAAGGTGATCTCTGTGGCTTATCCAGGATTGG
AATCTCATCCACAACATGAAGTTGCAAAGAAGCAAATGAGAGGATTTGGA
GGAATGGTGACATTGCGCGTCAAGGGTGGCCTTGAAGGTGCACGGAAATT
CCTCGAAAACCTTAAGATCTTTGTACTTGCTGAATCTCTCGGTGCTGTAG
AATCTCTTGCAGAATCACCAGCCATTATGACACATGCTTCTGTCGCACCT
GAACACCGTGCCGCTATTGGTATTTTTGATGACCTTGTTCGTCTCTCTGT
TGGTGTCGAAGACCTTGCAGACCTCCAACGTGATATCGAATCTGCTCTGG
CTACCATTCCAGCAGAAGAATAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig100103:2..574+

>mRNA_M-pyrifera_M_contig100103.24.1 ID=mRNA_M-pyrifera_M_contig100103.24.1|Name=mRNA_M-pyrifera_M_contig100103.24.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig100103:2..574+ (Macrocystis pyrifera P11B4 male)
AAGTATATTGGTGGCCACTCTGATGTCGTCATTGGATGTGTGATGGTGAA
TGATGAAGAGATGTATGATGGATTGAAGTTCATCCAGAACGGAATTGGTG
CTGTGCCTGGACCCCTGGATTGCTACCTTGCATTGCGTGGACTCAAAACT
CTTCATCTTCGCATGGAGAGGCACAACGCAAACGCCTTGGCAATTGCAAA
AGAACTCGAAAAGCATCCCAAGGTGATCTCTGTGGCTTATCCAGGATTGG
AATCTCATCCACAACATGAAGTTGCAAAGAAGCAAATGAGAGGATTTGGA
GGAATGGTGACATTGCGCGTCAAGGGTGGCCTTGAAGGTGCACGGAAATT
CCTCGAAAACCTTAAGATCTTTGTACTTGCTGAATCTCTCGGTGCTGTAG
AATCTCTTGCAGAATCACCAGCCATTATGACACATGCTTCTGTCGCACCT
GAACACCGTGCCGCTATTGGTATTTTTGATGACCTTGTTCGTCTCTCTGT
TGGTGTCGAAGACCTTGCAGACCTCCAACGTGATATCGAATCTGCTCTGG
CTACCATTCCAGCAGAAGAATAAAAGTATATTGGTGGCCACTCTGATGTC
GTCATTGGATGTGTGATGGTGAATGATGAAGAGATGTATGATGGATTGAA
GTTCATCCAGAACGGAATTGGTGCTGTGCCTGGACCCCTGGATTGCTACC
TTGCATTGCGTGGACTCAAAACTCTTCATCTTCGCATGGAGAGGCACAAC
GCAAACGCCTTGGCAATTGCAAAAGAACTCGAAAAGCATCCCAAGGTGAT
CTCTGTGGCTTATCCAGGATTGGAATCTCATCCACAACATGAAGTTGCAA
AGAAGCAAATGAGAGGATTTGGAGGAATGGTGACATTGCGCGTCAAGGGT
GGCCTTGAAGGTGCACGGAAATTCCTCGAAAACCTTAAGATCTTTGTACT
TGCTGAATCTCTCGGTGCTGTAGAATCTCTTGCAGAATCACCAGCCATTA
TGACACATGCTTCTGTCGCACCTGAACACCGTGCCGCTATTGGTATTTTT
GATGACCTTGTTCGTCTCTCTGTTGGTGTCGAAGACCTTGCAGACCTCCA
ACGTGATATCGAATCTGCTCTGGCTACCATTCCAGCAGAAGAATAA
back to top