mRNA_M-pyrifera_M_contig10002.10.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: D8LKI6_ECTSI (ABC transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI6_ECTSI) HSP 1 Score: 174 bits (442), Expect = 5.940e-51 Identity = 83/103 (80.58%), Postives = 89/103 (86.41%), Query Frame = 1 Query: 1 QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADPSLLAAR 309 QDNVP L W+KDAS+IK AFEALCVNELKGLEFECD KSR PCIRTGEQMLERVAFG STV GAT+ LSK+LGSCWALTYL L LG PR+QTM DPSLLA + Sbjct: 10 QDNVPQCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRAPCIRTGEQMLERVAFGESTVEGATIGLSKILGSCWALTYLALVLGKPRFQTMLDPSLLAGK 112
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: A0A836CL29_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL29_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.100e-22 Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 1 QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKS--RGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADPSLLAA 306 QDNVP LR +K+ASLIK AFE + VNE+ +F C S RGPCI+TGEQML+R+ FG STV + +L+K+L + + LTYL L P+YQ M DP +AA Sbjct: 320 QDNVPRLLRPLKEASLIKWAFEGMSVNEMNDTKFLCHDASFKRGPCIQTGEQMLDRIGFGDSTVRNSVQALAKILLASYTLTYLGLVASRPKYQPMLDPDEVAA 423
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: A0A836CJY0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJY0_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.200e-22 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 1 QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKS--RGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADPSLLAA 306 QDNVP LR +K+ASLIK AFE + VNE+ +F C S RGPCI+TGEQML+R+ FG+STV + +L+K+L + + LTY L P+YQ M DP +AA Sbjct: 508 QDNVPRLLRPLKEASLIKWAFEGMSVNEMNDTKFLCHDASFKRGPCIQTGEQMLDRIGFGKSTVRNSVQALAKILLASYTLTYFGLVASRPKYQPMLDPDEVAA 611
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: A0A4D9D0J8_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0J8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.590e-17 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 1 QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTK--SRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADP 291 + +VP LRW++D SLIK+AFEALC+NE +GLEFE + + P + GEQ+L+R+ F STV A + S + G + LTYL LAL P++Q + P Sbjct: 597 EKSVPVALRWIQDVSLIKYAFEALCINEFQGLEFEQEKRLGPGPPQVAKGEQVLQRLNFHESTVTRAVVRQSALAGVSYLLTYLMLALKKPKFQRVLSP 695
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: A0A2P6VEZ0_9CHLO (ABC transporter G family member 7 isoform B n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VEZ0_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 1.160e-16 Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 7 NVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADPSLLAA 306 NVPGPL+W+ ASLIK AFE CVNE KG EFE D RG RTGE++L+R++F S+V + +++ W TY L P+YQ + P+ A Sbjct: 579 NVPGPLKWLPAASLIKQAFEGACVNEFKGAEFEPD--ERGGGTRTGEEVLQRLSFADSSVRKTVANQGRIMMVYWWTTYCILKAKQPKYQPLEPPAAAPA 676
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: UPI001E1E05A0 (ABC transporter G family member 7-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E05A0) HSP 1 Score: 86.3 bits (212), Expect = 1.780e-16 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADPSLL 300 + NVP L WV AS+IKHAFE LCVNE G++FE R +RTGEQ L+R+++ STV+ +S +VL + TY+ L+ +P++Q +A P ++ Sbjct: 155 ESNVPSWLSWVPRASIIKHAFEGLCVNEFTGIKFEA---KRPWDVRTGEQQLQRLSWSESTVSRTCVSQLRVLAFNYLATYIVLSSKTPKFQPLASPEVI 251
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: A0A6T0FSZ2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6T0FSZ2_EMIHU) HSP 1 Score: 86.7 bits (213), Expect = 3.440e-16 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 1 QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADP 291 +++ P LRW+ S I+ E L VNE GL F C +RGPC TGEQ LERV+FG STV GA ++ +K++G + T L L SP++ + P Sbjct: 196 EESTPRALRWIPKVSFIRWCSEGLAVNEFSGLRFSCKG-ARGPCCETGEQALERVSFGGSTVRGAAVAQAKLVGGLYVATLLVLRRSSPKFLRVEPP 291
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: E1Z6R9_CHLVA (ABC transporter domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z6R9_CHLVA) HSP 1 Score: 87.4 bits (215), Expect = 3.960e-16 Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 1 QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADP 291 + NVPGPL+W+ ASLIK AFE CVNE +G EFE D + G TG+++LER++FG S++ S +++ + + LTY L P+YQ + P Sbjct: 612 ESNVPGPLKWLPSASLIKQAFEGSCVNEFRGAEFELDERGHGTA--TGDEVLERLSFGDSSLRRTLASQGRIMLTYYWLTYCILVRKQPKYQPLMMP 706
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: A0A7S2XW36_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW36_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.220e-16 Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 25 RWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTMADP 291 ++++ S+I+ FE L VNE G F CD + G C+ GEQ+L+R++FG STVAGA + +VL C+A+ L G P++Q + P Sbjct: 1 KFLEKTSIIRWGFEGLAVNEFSGSTFICDEDNIGACVSNGEQVLKRLSFGDSTVAGAIIGQGRVLAGCYAVALWALVKGKPKFQPLESP 89
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Match: R7QTJ3_CHOCR (Uncharacterized protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTJ3_CHOCR) HSP 1 Score: 86.7 bits (213), Expect = 6.610e-16 Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 4 DNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQMLERVAFGRSTVAGATLSLSKVLGSCWALTYLTLALGSPRYQTM 282 +NVP W+ SLIKHA+EALCVNE +G+EFE +RTGEQ+L+R+ +G STV+ A L LSK+L + TY L L P+++ + Sbjct: 437 ENVPAWASWIPRVSLIKHAYEALCVNEFRGIEFEAKESWD---VRTGEQVLQRMTWGESTVSKACLRLSKILAFNYLATYAILTLKKPKFEKL 526 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10002.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10002.10.1 >prot_M-pyrifera_M_contig10002.10.1 ID=prot_M-pyrifera_M_contig10002.10.1|Name=mRNA_M-pyrifera_M_contig10002.10.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp QDNVPGPLRWVKDASLIKHAFEALCVNELKGLEFECDTKSRGPCIRTGEQback to top mRNA from alignment at M-pyrifera_M_contig10002:316..2979+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10002.10.1 ID=mRNA_M-pyrifera_M_contig10002.10.1|Name=mRNA_M-pyrifera_M_contig10002.10.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2664bp|location=Sequence derived from alignment at M-pyrifera_M_contig10002:316..2979+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10002:316..2979+ >mRNA_M-pyrifera_M_contig10002.10.1 ID=mRNA_M-pyrifera_M_contig10002.10.1|Name=mRNA_M-pyrifera_M_contig10002.10.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig10002:316..2979+ (Macrocystis pyrifera P11B4 male)back to top |