Homology
BLAST of mRNA_L-elsbetiae_contig1757.4948.1 vs. uniprot
Match:
A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)
HSP 1 Score: 129 bits (323), Expect = 6.140e-31
Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 0
Query: 1 RVKRVQGPTATPSGVAALPE-VGSGDTEGAGIANTDARGLCVGDPFAMMVA---MGRGQYTLGLFCCTVAPSEGTRVGSGAVVKGKLMKLKQT-----TRALEAVEGASTSGAVSAAHSAPVGDSWDHWGDLGMHKGELSCKVRLVLPLDPD 143
R+KR++G TA SG A VG E AGI NTD+RG+ VGDPFAM+VA M QY LGLF CT AP + V KG+LMKL+++ A+ EG TS + AP DSW HWGDLG+HKGELSCK RLVL LDPD
Sbjct: 246 RLKRLRGYTAGQSGSATGSRGVGGRGEEAAGIGNTDSRGIVVGDPFAMLVATPGMRPAQYALGLFSCTKAPMDEQAQDGSPVFKGRLMKLQRSKVAPAVGAVRLGEGDGTSSSDFGEDGAPAKDSWQHWGDLGLHKGELSCKCRLVLALDPD 397
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1757.4948.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
R V K R V Q G P T A T P S G V A A L P E V G S G D T E G A G I A N T D A R G L C V G D P F A M M V A M G R G Q Y T L G L F C C T V A P S E G T R V G S G A V V K G K L M K L K Q T T R A L E A V E G A S T S G A V S A A H S A P V G D S W D H W G D L G M H K G E L S C K V R L V L P L D P D I V V E P A V V E E T V T R T A P G E G P A T E G S A H V V E R T L F R F T R A D L V A V K A T L V E E F G A L K A W S R R K P A S A Y C G R R R K P A S D S R R P R P C * 20 40 60 80 100 120 140 160 180 200 220 Expect = 6.14e-31 / Id = 51.97 Sequence A0A6H5L2E6_9PHAE
Match Name E-value Identity Description
A0A6H5L2E6_9PHAE 6.140e-31 51.97 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig1757.4948.1 ID=prot_L-elsbetiae_contig1757.4948.1|Name=mRNA_L-elsbetiae_contig1757.4948.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp RVKRVQGPTATPSGVAALPEVGSGDTEGAGIANTDARGLCVGDPFAMMVA MGRGQYTLGLFCCTVAPSEGTRVGSGAVVKGKLMKLKQTTRALEAVEGAS TSGAVSAAHSAPVGDSWDHWGDLGMHKGELSCKVRLVLPLDPDIVVEPAV VEETVTRTAPGEGPATEGSAHVVERTLFRFTRADLVAVKATLVEEFGALK AWSRRKPASAYCGRRRKPASDSRRPRPC* back to top