mRNA_L-elsbetiae_contig1742.4889.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1742.4889.1
Unique NamemRNA_L-elsbetiae_contig1742.4889.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A022QQC9_ERYGU (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A022QQC9_ERYGU)

HSP 1 Score: 240 bits (612), Expect = 4.600e-80
Identity = 103/110 (93.64%), Postives = 109/110 (99.09%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVR+CDECNYGSF+GRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A835YSG5_9STRA (U2 snRNP protein Rds3p n=2 Tax=Eukaryota TaxID=2759 RepID=A0A835YSG5_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.870e-79
Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGS+EGRC ICGG GISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFK+R
Sbjct:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSYEGRCVICGGVGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQR 110          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: M4E1W9_BRARP (Uncharacterized protein n=15 Tax=Eukaryota TaxID=2759 RepID=M4E1W9_BRARP)

HSP 1 Score: 239 bits (610), Expect = 2.120e-79
Identity = 105/110 (95.45%), Postives = 109/110 (99.09%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRCTICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:   26 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCTICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 135          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A7S0HIU9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HIU9_9EUKA)

HSP 1 Score: 239 bits (609), Expect = 3.680e-79
Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPGIA+GRLCEKCDGKC +CDSYVRPCTLVRICDECNYGS+EGRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:   32 MAKHHPDLIMCRKQPGIAVGRLCEKCDGKCPICDSYVRPCTLVRICDECNYGSYEGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 141          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: M4DYK5_BRARP (Uncharacterized protein n=11 Tax=Brassicaceae TaxID=3700 RepID=M4DYK5_BRARP)

HSP 1 Score: 237 bits (605), Expect = 5.370e-79
Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: PHF5A_ARATH (PHD finger-like domain-containing protein 5A n=13 Tax=rosids TaxID=71275 RepID=PHF5A_ARATH)

HSP 1 Score: 237 bits (604), Expect = 7.630e-79
Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: B3S8G1_TRIAD (Uncharacterized protein n=44 Tax=Eumetazoa TaxID=6072 RepID=B3S8G1_TRIAD)

HSP 1 Score: 237 bits (604), Expect = 7.630e-79
Identity = 102/110 (92.73%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGS++GRC ICGGPGISDAYYC+ECT QEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGISDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A7SWK0_NEMVE (Predicted protein n=5 Tax=Eumetazoa TaxID=6072 RepID=A7SWK0_NEMVE)

HSP 1 Score: 237 bits (604), Expect = 7.630e-79
Identity = 101/110 (91.82%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGS++GRC ICGGPG+SDAYYC+ECT QEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTVQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A7S2RJG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJG3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 7.630e-79
Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCV+CDSYVRP TLVRICDECNYGS+EGRC ICGGPGISDAYYCREC QQEKDRDGCPKI+NLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPATLVRICDECNYGSYEGRCVICGGPGISDAYYCRECCQQEKDRDGCPKIINLGSSKTDLFYERKKYGFKKR 110          
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A816L1T2_BRANA ((rape) hypothetical protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A816L1T2_BRANA)

HSP 1 Score: 237 bits (605), Expect = 1.190e-78
Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:   25 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 134          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A022QQC9_ERYGU4.600e-8093.64Uncharacterized protein n=5 Tax=Eukaryota TaxID=27... [more]
A0A835YSG5_9STRA1.870e-7996.36U2 snRNP protein Rds3p n=2 Tax=Eukaryota TaxID=275... [more]
M4E1W9_BRARP2.120e-7995.45Uncharacterized protein n=15 Tax=Eukaryota TaxID=2... [more]
A0A7S0HIU9_9EUKA3.680e-7993.64Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
M4DYK5_BRARP5.370e-7994.55Uncharacterized protein n=11 Tax=Brassicaceae TaxI... [more]
PHF5A_ARATH7.630e-7993.64PHD finger-like domain-containing protein 5A n=13 ... [more]
B3S8G1_TRIAD7.630e-7992.73Uncharacterized protein n=44 Tax=Eumetazoa TaxID=6... [more]
A7SWK0_NEMVE7.630e-7991.82Predicted protein n=5 Tax=Eumetazoa TaxID=6072 Rep... [more]
A0A7S2RJG3_9STRA7.630e-7994.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A816L1T2_BRANA1.190e-7894.55(rape) hypothetical protein n=1 Tax=Brassica napus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1742contigL-elsbetiae_contig1742:12144..13703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.0
Seed ortholog evalue1.7e-62
Seed eggNOG ortholog2880.D7G4T7
Preferred namePHF5A
KEGG koko:K12834
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005686,GO:0005689,GO:0005737,GO:0006139,GO:0006355,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009410,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0034399,GO:0034622,GO:0034641,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:0140110,GO:1901360,GO:1901363,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG1705@1,KOG1705@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Ec32 ortholog descriptionU2 snRNP protein Rds3p
Ec32 orthologEc-20_000410.1
Exons4
Model size420
Cds size333
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1742.4889.1prot_L-elsbetiae_contig1742.4889.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1742 12144..13616 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815725.9620135-CDS-L-elsbetiae_contig1742:12143..121951622815725.9620135-CDS-L-elsbetiae_contig1742:12143..12195Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 12144..12195 +
1691683062.4509702-CDS-L-elsbetiae_contig1742:12143..121951691683062.4509702-CDS-L-elsbetiae_contig1742:12143..12195Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 12144..12195 +
1622815725.9730961-CDS-L-elsbetiae_contig1742:12634..126581622815725.9730961-CDS-L-elsbetiae_contig1742:12634..12658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 12635..12658 +
1691683062.4622908-CDS-L-elsbetiae_contig1742:12634..126581691683062.4622908-CDS-L-elsbetiae_contig1742:12634..12658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 12635..12658 +
1622815725.9864416-CDS-L-elsbetiae_contig1742:12982..130711622815725.9864416-CDS-L-elsbetiae_contig1742:12982..13071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 12983..13071 +
1691683062.4771047-CDS-L-elsbetiae_contig1742:12982..130711691683062.4771047-CDS-L-elsbetiae_contig1742:12982..13071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 12983..13071 +
1622815725.9969056-CDS-L-elsbetiae_contig1742:13448..136161622815725.9969056-CDS-L-elsbetiae_contig1742:13448..13616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 13449..13616 +
1691683062.485726-CDS-L-elsbetiae_contig1742:13448..136161691683062.485726-CDS-L-elsbetiae_contig1742:13448..13616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1742 13449..13616 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815726.0088258-UTR-L-elsbetiae_contig1742:13616..137031622815726.0088258-UTR-L-elsbetiae_contig1742:13616..13703Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1742 13617..13703 +
1691683062.4965053-UTR-L-elsbetiae_contig1742:13616..137031691683062.4965053-UTR-L-elsbetiae_contig1742:13616..13703Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1742 13617..13703 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1742.4889.1

>prot_L-elsbetiae_contig1742.4889.1 ID=prot_L-elsbetiae_contig1742.4889.1|Name=mRNA_L-elsbetiae_contig1742.4889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECN
YGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFY
ERKKYGFKKR*
back to top

mRNA from alignment at L-elsbetiae_contig1742:12144..13703+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1742.4889.1 ID=mRNA_L-elsbetiae_contig1742.4889.1|Name=mRNA_L-elsbetiae_contig1742.4889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1560bp|location=Sequence derived from alignment at L-elsbetiae_contig1742:12144..13703+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGAAGCATCATCCGGATCTGGTTATGTGCCGGAAACAGCCTGGCAT CGGTGAGTTGATTATATTTGTGTGACTCGCGCGGGATAGGGGGGGGGGGG GGGGGGGGGGAAGGCGGTGGAGTCGCCTCCGGTCATGAGCTATCGATTAG CATTGCACGCCGGCCGTCACTTGGACACTGAAAGGCTTCGTTGTCCATCT TTAATGTGGTTTCATTGCGAGTTGTTCGATCGCATGCGCCCACTCGTCGG GGTCAACTGGGGCTCGCTCCCGTGGCAGCTCAGGTAGGTTGCATCACACA CACACAGACGTGCCCTCTTTGTCTTCCTCCACCCCCCTGGTTATCCCCAT ACCTGCGGGTTTTCTAGGCTTTCATGTCGTGCTTGGTATTACCCTTGTCT AATACCCCCGTTCACCCTCCACCCCCTCCCTGCTTCGCATGTTCCGCCCT CTTGTAAAAATAACTGCGCGGGCTGGTCCGGATATATCAAGCCATCGGCC GGCTGTGCGAGAAATGTAAGCAAAGAGCAGTATTTGTGGCGTTGCACAGC AGTTAGTGATATAAGGGGATCTAGAGATCTAGCGTAAGTCTTTTTTGTGG TATCAGTAGTGGCGTATCGTTGTCGTTACGTTGCGTGATGGAGAGAGATC AGCTGCGATGTAGATTCTAGACTAGCAGCAGCAGCAGCAGCAGCAGCAGC AGTGCAAACAGCAGGCAAGATCTGTCGTGCTGCCTTTGCGGACCTGCTCT GTACAGCAAATACATACATAGGATCCCAAGACTAAAACCCCCCCCTCGCC TCTGCCTCGCCCCGTGCAAACCTTCGTGCGATGCCGCAGGTGACGGCAAG TGCGTCGTGTGCGATTCTTACGTGCGCCCCTGCACTCTAGTCCGCATCTG CGACGAGTGCAACTACGGCTCTTTCGAGGTGAACATTGAATGTTGTCCAC CTGATAGTACTTCGTATACTACTGCTGTATCTGTAGAGTTTTACCAGAGC GAGAGCAGTGTGGTCCATCAGAGGAGCACCGCATCACCCCCTGATGCTGG AGTTATGTCTGTCCCGCCTTCCCAGTTGACCTCAACACACGGCGCAACGC GACACACCACAGTGTTCCTCCTCCCAGCAGTGATGCCTATTCGCGCAAAA CCCTCTGCGCGTTCTTGTTAGTTTTTCACACGCTTCTTCTGTTGTTTTGG TGCATATTGAGCTCTTTATATGTACATGTGTCACCAGTTCATTTACAACC TTTGCTAACTTTGGTGGTTGTCCCTTCGCGACCGGCCCCTTTGCTTGCGT TTCAGGGTCGGTGCACCATCTGCGGAGGCCCGGGCATCTCGGACGCGTAC TACTGCCGCGAGTGCACGCAGCAGGAGAAGGACCGAGACGGCTGTCCCAA GATCGTCAACCTGGGGAGCTCGAAAACCGACCTGTTCTACGAGAGAAAGA AGTACGGCTTCAAGAAGAGATGATGCCGGTGGCCTGCGCCGCAGCGGTGT TGACAGATCCGTCGAAGGATCAGGATTGACATCGTTGGGGGCGCCGGCCA GGGGAGGAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1742:12144..13703+

>mRNA_L-elsbetiae_contig1742.4889.1 ID=mRNA_L-elsbetiae_contig1742.4889.1|Name=mRNA_L-elsbetiae_contig1742.4889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig1742:12144..13703+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGAAGCATCATCCGGATCTGGTTATGTGCCGGAAACAGCCTGGCAT
CGATGGCGAAGCATCATCCGGATCTGGTTATGTGCCGGAAACAGCCTGGC
ATCGCCATCGGCCGGCTGTGCGAGAAATCCATCGGCCGGCTGTGCGAGAA
ATGTGACGGCAAGTGCGTCGTGTGCGATTCTTACGTGCGCCCCTGCACTC
TAGTCCGCATCTGCGACGAGTGCAACTACGGCTCTTTCGAGGTGACGGCA
AGTGCGTCGTGTGCGATTCTTACGTGCGCCCCTGCACTCTAGTCCGCATC
TGCGACGAGTGCAACTACGGCTCTTTCGAGGGTCGGTGCACCATCTGCGG
AGGCCCGGGCATCTCGGACGCGTACTACTGCCGCGAGTGCACGCAGCAGG
AGAAGGACCGAGACGGCTGTCCCAAGATCGTCAACCTGGGGAGCTCGAAA
ACCGACCTGTTCTACGAGAGAAAGAAGTACGGCTTCAAGAAGAGATGAGG
TCGGTGCACCATCTGCGGAGGCCCGGGCATCTCGGACGCGTACTACTGCC
GCGAGTGCACGCAGCAGGAGAAGGACCGAGACGGCTGTCCCAAGATCGTC
AACCTGGGGAGCTCGAAAACCGACCTGTTCTACGAGAGAAAGAAGTACGG
CTTCAAGAAGAGATGA
back to top