mRNA_L-elsbetiae_contig1739.4873.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1739.4873.1
Unique NamemRNA_L-elsbetiae_contig1739.4873.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 3.430e-123
Identity = 187/218 (85.78%), Postives = 202/218 (92.66%), Query Frame = 1
Query:  154 STQMFLGTTATLIASSAAFIAPMAVRSAAPASWSS-LEMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 804
            S+ MFLGT ATLIASS AF+APMAVRSAAPAS +S L+MSAGSDYVATLPGAPF DGKIFDPL LSDGAEPGEIKLWREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTITKAYA+PS VTGEGGL+++YSPGDLGFDPL +KPK  A L  MQTKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    4 SSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 1.980e-119
Identity = 185/218 (84.86%), Postives = 197/218 (90.37%), Query Frame = 1
Query:  154 STQMFLGTTATLIASSAAFIAPMAVRSAAPASWSS-LEMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 804
            +TQ+FLG+ ATLIASS AF+APMAVRSAAPAS SS L+MSAGSDYVATLPGAPF DGKIFDPL LSDGA+P +IK WREAEIKHGRVAMLASLGVLVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP+  A L  M+TKELNNGRLAMIGIAGMLVQELINPADILG
Sbjct:    3 ATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 1.280e-110
Identity = 175/220 (79.55%), Postives = 190/220 (86.36%), Query Frame = 1
Query:  154 STQMFLGTTATLIASSAAFIAPMAVRSAAPASWSS-LEMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG*F 810
            ++QMFLGT A LIASS AF+AP+AVRSAAPAS +S L+MSAGSDYVATLPGAPFSDGKIFDPL LSDGA PG+IK WREAEIKHGRVAMLASLG+LVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP   A L  M+TKELNNGRLAMIGIAGML QEL+N  DIL  F
Sbjct:    3 ASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDILPNF 222          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 6.700e-109
Identity = 171/221 (77.38%), Postives = 195/221 (88.24%), Query Frame = 1
Query:  145 LGTSTQMFLGTTATLIASSAAFIAPMAVRSAAPASWSS-LEMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 804
            +  S+ MFLGT ATLIASSAAF+ PMAVRSAAPAS +S L+MSAG+DY+ATLPGA   +GKIFD L L+DGA+PGEIKLWREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI KAYA+PS VTGEGGL+++YSPGDLGFDP  IKPK  A L  MQ KELNNGRLAMIGI GMLVQEL+N  DILG
Sbjct:    1 MAASSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 8.790e-89
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 1
Query:  322 KIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 804
            +IFDPLGLSDGA PG+IK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP   A L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 9.460e-89
Identity = 134/160 (83.75%), Postives = 146/160 (91.25%), Query Frame = 1
Query:  322 KIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 801
            KIFDPLGL+DGAE G+IKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTITKAYA+PS VTGEGGL+++YSPGDLGFDPL +KP     L TMQTKELNNGRLAMIGIAG LVQEL+NP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 2.420e-87
Identity = 152/218 (69.72%), Postives = 163/218 (74.77%), Query Frame = 1
Query:  154 STQMFLGTTATLIASSAAFIAPMAVRSAAPASWS-SLEMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 804
            ++QMF+GT ATLIASS AF+APMAVRS      S  L+MSAGSDYVATLPGAPFSDGKIFDPLGLSDGA PG+IK WREAEIKHGRVAMLASLGV+VAE                            FW FSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP   A L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    3 ASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 2.610e-86
Identity = 181/391 (46.29%), Postives = 195/391 (49.87%), Query Frame = 1
Query:  154 STQMFLGTTATLIASSAAFIAPMAVRSAA---PASWSSLEMSAGSDYVATLPGAPFSDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 804
            ++QMF+GT ATLIASS AF+AP+AVRS A   P+S SSL MSAGSDYVATLPGAPFSDGK                                                                                                                                                                           IFDPLGLSDGA PG+IK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP   A L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    3 ASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSS-SSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 8.260e-81
Identity = 129/218 (59.17%), Postives = 166/218 (76.15%), Query Frame = 1
Query:  151 TSTQMFLGTTATLIASSAAFIAPMAVRSAAPASWSSLEMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 804
            TST   +G  +   AS  AFI P     +A  + ++  MSAGSDYV+TLPGAPF+DGK++DP+GLS  A+P +IK WREAEIKHGRVAMLAS+GVLVAE +HP F+GPDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   +A+   VTGEGG++ DY PGDLGFDPLG+ P+   +L  M+TKELN+GRLAMIGI GM+VQEL+ P  I G
Sbjct:   54 TSTGALVGMASWCFASCEAFIVPTPTTLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 5.420e-72
Identity = 129/222 (58.11%), Postives = 166/222 (74.77%), Query Frame = 1
Query:  154 STQMFLGTTATLIASSAAFIAPMAV-RS--AAPASWSSLEMSAGSDYVATLPGAPF---SDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 801
            ++Q+FLGT ATLIASSAAF+AP+A  RS  A  A+ S+ +M+AGSDY A+LPGAPF   ++GK FDP GL+   +P  IK WREAE+KHGRV+MLA++G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+   S VTG G LK +Y PGDLGFDPLG+ PK   D   +Q++EL+ GR AMIG+ GM+VQE+++   IL
Sbjct:    3 TSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1739.4873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7S1_ECTSI3.430e-12385.78Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q6_ECTSI1.980e-11984.86Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI1.280e-11079.55Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI6.700e-10977.38Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI8.790e-8983.23Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI9.460e-8983.75Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE2.420e-8769.72LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5JWB4_9PHAE2.610e-8646.29LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G5B4_ECTSI8.260e-8159.17Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI5.420e-7258.11Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1739contigL-elsbetiae_contig1739:19523..23009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.7
Seed ortholog evalue2.4e-100
Seed eggNOG ortholog2880.D7G7S1
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons4
Model size1628
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1739.4873.1prot_L-elsbetiae_contig1739.4873.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1739 20344..22871 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815723.7755184-UTR-L-elsbetiae_contig1739:19522..203431622815723.7755184-UTR-L-elsbetiae_contig1739:19522..20343Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1739 19523..20343 -
1691683060.9262326-UTR-L-elsbetiae_contig1739:19522..203431691683060.9262326-UTR-L-elsbetiae_contig1739:19522..20343Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1739 19523..20343 -
1622815723.8523736-UTR-L-elsbetiae_contig1739:22871..230091622815723.8523736-UTR-L-elsbetiae_contig1739:22871..23009Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1739 22872..23009 -
1691683060.9792693-UTR-L-elsbetiae_contig1739:22871..230091691683060.9792693-UTR-L-elsbetiae_contig1739:22871..23009Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1739 22872..23009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815723.7896438-CDS-L-elsbetiae_contig1739:20343..206191622815723.7896438-CDS-L-elsbetiae_contig1739:20343..20619Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 20344..20619 -
1691683060.9388871-CDS-L-elsbetiae_contig1739:20343..206191691683060.9388871-CDS-L-elsbetiae_contig1739:20343..20619Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 20344..20619 -
1622815723.804395-CDS-L-elsbetiae_contig1739:21465..215491622815723.804395-CDS-L-elsbetiae_contig1739:21465..21549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 21466..21549 -
1691683060.949144-CDS-L-elsbetiae_contig1739:21465..215491691683060.949144-CDS-L-elsbetiae_contig1739:21465..21549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 21466..21549 -
1622815723.8190062-CDS-L-elsbetiae_contig1739:22247..223701622815723.8190062-CDS-L-elsbetiae_contig1739:22247..22370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 22248..22370 -
1691683060.9591277-CDS-L-elsbetiae_contig1739:22247..223701691683060.9591277-CDS-L-elsbetiae_contig1739:22247..22370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 22248..22370 -
1622815723.8323739-CDS-L-elsbetiae_contig1739:22685..228711622815723.8323739-CDS-L-elsbetiae_contig1739:22685..22871Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 22686..22871 -
1691683060.96924-CDS-L-elsbetiae_contig1739:22685..228711691683060.96924-CDS-L-elsbetiae_contig1739:22685..22871Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1739 22686..22871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1739.4873.1

>prot_L-elsbetiae_contig1739.4873.1 ID=prot_L-elsbetiae_contig1739.4873.1|Name=mRNA_L-elsbetiae_contig1739.4873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
MNLGTSTQMFLGTTATLIASSAAFIAPMAVRSAAPASWSSLEMSAGSDYV
ATLPGAPFSDGKIFDPLGLSDGAEPGEIKLWREAEIKHGRVAMLASLGVL
VAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITK
AYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTAADLVTMQTKELNNGR
LAMIGIAGMLVQELINPADILG*
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mRNA from alignment at L-elsbetiae_contig1739:19523..23009-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1739.4873.1 ID=mRNA_L-elsbetiae_contig1739.4873.1|Name=mRNA_L-elsbetiae_contig1739.4873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3487bp|location=Sequence derived from alignment at L-elsbetiae_contig1739:19523..23009- (Laminarionema elsbetiae ELsaHSoW15)
GTGACGTCAACGGCGAGGTTGGCGTTTGGTGTGTGTAGATCATTGTTCTG CGCTAATCTCGCCGCATCTTCCTCACAAACCCACCCCCCTCTCCAACACA ACCACTTTCTGCTCTCTCCACACCTCCACTCAACCACGATGAACCTCGGC ACCTCCACACAGATGTTCCTCGGCACCACCGCCACCCTCATCGCCTCGTC TGCGGCTTTCATCGCCCCGATGGCCGTGCGATCCGCGGCACCCGCATCCT GGTCGAGCCTGGAGATGAGCGCTGGATCGGACTACGTTGCAACCCTGCCC GGTGCTCCGTTCTCCGACGGAAAGGTGAGCGGGATAGATTCACCACCCCC TGTGCCTTTATATGGTATGGTCTAGTCTACAGTTGGGCTGGCGGCGTCTC TCTCTCGTTGTTAGTTCGGTGGAGAGCAGCGGCGCTTGGTTGTTGTGCAC ACACGTCGACATGTTTTTGCTGACGTCCCATTTACGAGTGCGTGTGCCGA GTACTCATCAACGGTCGTGCACCCAACGGCTAGCACTTGTGCGTGGTAGC TGGTCGTTTGCACTTGATTTTGCCCTGCCCAGCCGGCTCTTTGCTGACCC GTTTCCCCTACTCATGATCCTGACTTACTTGCGCTGCAGATCTTCGACCC CCTGGGCTTGTCCGACGGCGCTGAACCTGGAGAGATCAAGCTCTGGCGCG AGGCCGAGATCAAGCATGGACGTGTGGCCATGCTCGCGTCGCTCGGGGTC CTTGTCGCCGAGGTGAGGTGCAACGTCTCACGGATATCGAGCTACCTGCG ATCTGCGGTCTGAGAGAGGGGGGTTGTTTCCTGGCAGTTTCCATGTGTTC TTGTCGCGATTGGGTTGAATCTATTGCGATGACGTCCTGCACGAGTGCCG GGAAACACAGCTGCAGCCGCGCGCTGCTTGGCCGGTGCCACTCGTCTGCG TGGCTTGTTGCTGTTGTTGTCGATGTGCGAAATCTTCCGTGAAGTAGGCA GGCTCCATCGTCTCTTTTACGGTGGCGGCTCAAAAACCAGCGGCGGAGTA TTTTTTCACCTTAGACCTAGACATCACTTCTCACAACACACCCGCTCTAT TTTTTTTATTTCGCGCGGAGGGTATGCCAACACCATACAACCCATGATAG CCCATCACCTGGATGAAACAAGCAACGCAGTATTTATCCCTAGCTCTTGC AGTTTCTGGCTCCCTTCCCCTTCCTGTGTACAGGCAGCAGTCCGCATTTG TTCCGAACCAGAGAGGGCGGGGTGTTGCTGGGAGTTGAGAGTTGCCTTTG AGCTAACTGTTGTACACTCAACATGTCTGTTGTAGACTTCGTACTTATAG GAACTTGGTAACACCGCCTTGAGCTGTCACAGAACCTGCTGTGCATCTAT GCCCGGTACCACTGCTGCTGCACCTCAATCCGCCTCTCTTTTTCGTTTTT CTCTGCGCAGGAGTACCACCCGTTCTTTATGGGCCCTGACTACATCGGCC CCGCTGTGGACCACTTCCAGGAGATCTCCGCTCAGTACCCCGAGGTAAAT GAGACTGCTGTCGGCCTCGCCACTTCCCGGCGGTCCCGCGCAGTGTTGGT TTAGTTCTGTGTAGTACCTCGACGCCGTTTCATACCGAAATACTCATCAT CACATTGTACGTTCGGGTACATTTACACGGAGTATATTTGTGTTTTTGAG ACGAAAGTGTAAGTGTTTTTCTCGTCCTGGAAAATACAAAAAATACAACA GATTGGGCGAGTCGCTTCAAAAGTAAATCTGCTGCCCCGGCCATCACTCA GCTCGACAACTCGTCAACTCCTGCAGAACAACCAGGTTTTTGCAAGAGAT ACCTGCGTTTCGCCCAGAGGTGCAAGTGCCATTCAATTTGCCGCGAACCA ATAATTAGCACGAATTCCGAGCCTCATAATAACCCTCATCTTCGAAGGGG CTGCAAAGTCGGTTTGCGAAACCCCAGGAGGTTTGCTTGAGCGACTAACT CATCGAGGTCAAAACAATCAAAACTGCATCACTGGAAGCGTAGGAAACGA AGAGGTGTTTCGGTTCTGCGCGCAACGGACAGAATGTAACGCGCTTTTTC GTAGACGTGTCCGCGACGTACCCAACGGATGAGATGATGTGTGTCACAAA ATCCAAAACTTACGTCATTTACAACTGGCTGTTTGATAATTGGCTTACTG TGAAAAATACACGTACGTGGAAATGGAGATCGCTGTGGCGGTTCTGCTCT CGTTAAACACTACCCTATCTGCGAAACATCGACTTTCTCCCGCATCCAAT ATGTACATACGTGATTTGGAGACACTCCCTTCCATCGCCAATCTCCCCCC ATCTCACCCTTGATGCCCCCTTCTACTCATGAAACACCAGTTCTGGGTAT TCTCCCTGCTGGGCATGGCCTTCATCGAGTACAACACCATCACCAAGGCG TACGCCAAGCCCAGTGAAGTGACCGGCGAGGGCGGCCTCAAGGAGGACTA CAGCCCGGGAGACCTCGGGTTCGACCCGCTCGGCATCAAGCCCAAGACCG CGGCGGACCTCGTGACGATGCAGACCAAGGAGCTCAACAACGGCCGCCTG GCCATGATCGGCATCGCCGGCATGTTGGTGCAGGAGCTCATCAACCCGGC CGACATCCTCGGCTAATTCGATGATTTGGTGGTCTGCAATTCCGCGACGA GCTCTACTAGAAGGATGTAAAGATTGTAGGGGGGTTTCACTTGAGTTGGG TTGTGCAAAGTAGGGATGCTCCGATCGAGGGGTAAACGGTTGGTGAAGAT TCGGATTCTGGGACGGCAGCGTAAGCTTGCTCGGGTTTTGTGGTGCAGTT TGTTTGCCACCGGGGTCTTGAGGCAGGGCAAACGTTGTGGGTGGCGTTGT TGATGTATTCGTGTGTGGCTTGGTGGCGTGTGAGTTGTCTCGTGTGCGTT TTTGTGTCGGCTTTTTGTCGACGTCATGGACACTTTTCCAAGACATGTTT AGGGAGGTTCCATTCGTTAGTGCTCTTTATTTTAGGAGGTTATGTACATA GCGTGGCTTCGATGATCGGCGGTGATTTTTCAGATTTGGGGGGTTCAGTG GACGTATTTCGTTGATTATCGTCCATCGCTGGACCCGTGCTTTTGATCGG CAGCATACCTGGCGAGCGGGGTCTTGGTCTTTACCAATGCGGTAGCGTGG TAGCGTGCCAGCAGCAGCGTGTTGTGCCGCACCCGATGTTTTTGTCTGGT CTGGTGTTATTATAGGGTTGCGTGTACGGAAATAGTCTGCATCGCATTCA GCGGTATATTGAGATGTGTTCCATTTGAGTTGAATGGTGACGGGGGGGCA TCAAGCCTCACCCACGCAGGTGGATGCGAAACAAAGCGATGCTGAGACCC ATTTGTCTTGATTTTCTTGCTGCCGTGTGAGCCTCGTGTCGGCCCGGTCT TACGCCCTTTGGTTTTATGGCACGGCGCAATTTTCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1739:19523..23009-

>mRNA_L-elsbetiae_contig1739.4873.1 ID=mRNA_L-elsbetiae_contig1739.4873.1|Name=mRNA_L-elsbetiae_contig1739.4873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1338bp|location=Sequence derived from alignment at L-elsbetiae_contig1739:19523..23009- (Laminarionema elsbetiae ELsaHSoW15)
ATGAACCTCGGCACCTCCACACAGATGTTCCTCGGCACCACCGCCACCCT
CATCGCCTCGTCTGCGGCTTTCATCGCCCCGATGGCCGTGCGATCCGCGG
CACCCGCATCCTGGTCGAGCCTGGAGATGAGCGCTGGATCGGACTACGTT
GCAACCCTGCCCGGTGCTCCGTTCTCCGACGGAAAGATGAACCTCGGCAC
CTCCACACAGATGTTCCTCGGCACCACCGCCACCCTCATCGCCTCGTCTG
CGGCTTTCATCGCCCCGATGGCCGTGCGATCCGCGGCACCCGCATCCTGG
TCGAGCCTGGAGATGAGCGCTGGATCGGACTACGTTGCAACCCTGCCCGG
TGCTCCGTTCTCCGACGGAAAGATCTTCGACCCCCTGGGCTTGTCCGACG
GCGCTGAACCTGGAGAGATCAAGCTCTGGCGCGAGGCCGAGATCAAGCAT
GGACGTGTGGCCATGCTCGCGTCGCTCGGGGTCCTTGTCGCCGAGATCTT
CGACCCCCTGGGCTTGTCCGACGGCGCTGAACCTGGAGAGATCAAGCTCT
GGCGCGAGGCCGAGATCAAGCATGGACGTGTGGCCATGCTCGCGTCGCTC
GGGGTCCTTGTCGCCGAGGAGTACCACCCGTTCTTTATGGGCCCTGACTA
CATCGGCCCCGCTGTGGACCACTTCCAGGAGATCTCCGCTCAGTACCCCG
AGGAGTACCACCCGTTCTTTATGGGCCCTGACTACATCGGCCCCGCTGTG
GACCACTTCCAGGAGATCTCCGCTCAGTACCCCGAGTTCTGGGTATTCTC
CCTGCTGGGCATGGCCTTCATCGAGTACAACACCATCACCAAGGCGTACG
CCAAGCCCAGTGAAGTGACCGGCGAGGGCGGCCTCAAGGAGGACTACAGC
CCGGGAGACCTCGGGTTCGACCCGCTCGGCATCAAGCCCAAGACCGCGGC
GGACCTCGTGACGATGCAGACCAAGGAGCTCAACAACGGCCGCCTGGCCA
TGATCGGCATCGCCGGCATGTTGGTGCAGGAGCTCATCAACCCGGCCGAC
ATCCTCGGCTAATTCTGGGTATTCTCCCTGCTGGGCATGGCCTTCATCGA
GTACAACACCATCACCAAGGCGTACGCCAAGCCCAGTGAAGTGACCGGCG
AGGGCGGCCTCAAGGAGGACTACAGCCCGGGAGACCTCGGGTTCGACCCG
CTCGGCATCAAGCCCAAGACCGCGGCGGACCTCGTGACGATGCAGACCAA
GGAGCTCAACAACGGCCGCCTGGCCATGATCGGCATCGCCGGCATGTTGG
TGCAGGAGCTCATCAACCCGGCCGACATCCTCGGCTAA
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