mRNA_L-elsbetiae_contig1733.4850.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1733.4850.1
Unique NamemRNA_L-elsbetiae_contig1733.4850.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: A0A6H5KUF9_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF9_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 1.910e-105
Identity = 159/201 (79.10%), Postives = 171/201 (85.07%), Query Frame = 2 
Query:    2 FYCGPRRVGNSILLCGTKEGRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLAFSLTACSDPGIVYRPAER-IPVP-------GASGGAAAVADAT-PAPAMEEGGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALALAPSLTQHL 577
            FYCGPRRVGN+ILLCGTKEGRFP HC+VGPNWMCMLATYGL+L PT+ALLI VTG  +W+ASFIVC+TGSALLLAFS+TACSDPGIVYRPAER IP P       G  GG  AVADAT P  AMEEGG+LCGRCDVKRP GAIHCT CNVCVTKFDHHCPWTGKCIGEKNI+FFYLFLG L LHV +V ALAL PS+ Q L
Sbjct:   23 FYCGPRRVGNTILLCGTKEGRFPQHCLVGPNWMCMLATYGLVLTPTLALLILVTGAKYWVASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPPPAAVGGESGGRGGETAVADATLPPMAMEEGGLLCGRCDVKRPAGAIHCTACNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLFLHVFVVGALALMPSVKQAL 223
[Close]
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: D7G1J4_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J4_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 3.310e-60
Identity = 105/148 (70.95%), Postives = 114/148 (77.03%), Query Frame = 2 
Query:  161 TGGDHWIASFIVCVTGSALLLAFSLTACSDPGIVYRPAER-IPVPGASGGAAAVAD--------ATPAPAMEEGGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALALAPSLTQHL 577
            TG ++W+ASFIVC+TGSALLLAFS+TACSDPGIVYRPAER IP                     A P  AMEEGGVLCGRCDVKRP GAIHC +CNVCVTKFDHHCPWTGKCIGEKNI+FFYLFLG LSLHV +V ALAL PS+ Q L
Sbjct:    4 TGAEYWVASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXEDAALPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVKQAL 151
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BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: A0A8J2SI51_9STRA (Palmitoyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SI51_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.460e-43
Identity = 84/179 (46.93%), Postives = 107/179 (59.78%), Query Frame = 2 
Query:   20 RVGNSILLCGTKEGRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLAFSLTACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEEGGV-LCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALAL 553
            RVG + L+CG K GR+P    VGP+W CML TY L+LVPTVA +IF+ G  HW A +   +TG A L+AFS  ACSDPG++YR A +                       EG V  C RCDV RP  A HC +C VC+   DHHCPWTGKCIG++ +  F+ FL  LS+H++ V   A+
Sbjct:   59 RVGATWLICGKKRGRWPLQWFVGPDWCCMLCTYTLVLVPTVAFIIFI-GEHHWAARYGAVLTGGATLVAFSSAACSDPGVIYREASQT--------------------GNEGDVHSCRRCDVIRPHEARHCYECQVCIDDLDHHCPWTGKCIGKRTLFAFHAFLICLSVHILFVVVGAI 216
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BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: I2CS30_NANGC (Palmitoyltransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CS30_NANGC)

HSP 1 Score: 154 bits (388), Expect = 3.880e-39
Identity = 82/215 (38.14%), Postives = 115/215 (53.49%), Query Frame = 2 
Query:   14 PRRVGNSILLCGTKEGRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLAFSLTACSDPGIVYRPA-----ERIPVP--------------GASGGAAAVADATPAPAMEEGG----------VLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALALAPSLTQ 571
            P+ +G  ILLCG K+G FP  C+VGP+W CML TY ++ VP++  LI V      +  ++   +    L  FSLTACSDPGIV+        ER   P              G+      V D + + A    G          + C RC++ RP+GA HC +C VCV   DHHCPWTGKCIG KN++FFYLFL  L++H++ + ++    ++  
Sbjct:   36 PQYIGRMILLCGRKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINN 250
[Close]
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: A0A7S2V8J0_9STRA (Palmitoyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8J0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.660e-38
Identity = 71/181 (39.23%), Postives = 100/181 (55.25%), Query Frame = 2 
Query:    2 FYCGPRRVGNSILLCGTKEGRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLAFSLTACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEEGGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAA 544
            FY  P  +G ++L+CG K  RFP  C+VGP+W CML TY LI VP+   + +     H     +  ++   LLL FSLTACSDPG +Y+            G  +  +       +   + CG C + RP  A HC +C  C  + DHHCPWTGKCIG++N+ FF +F   L +H++L+ A
Sbjct:   23 FYFTPHMIGRTVLICGKKRSRFPFQCLVGPDWHCMLLTYTLIGVPSGLFIHYAAYLLHPAVFIVAILSTMLLLLLFSLTACSDPGTIYQEVGGDSRRSNGEGGVSRDETRRQRGNDANRLECGACGISRPKSASHCYECQTCTDELDHHCPWTGKCIGKRNLFFFQMFTAYLVVHIILILA 203
[Close]
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: W2Q3B8_PHYPN (Palmitoyltransferase n=13 Tax=Phytophthora TaxID=4783 RepID=W2Q3B8_PHYPN)

HSP 1 Score: 144 bits (364), Expect = 1.900e-36
Identity = 76/181 (41.99%), Postives = 104/181 (57.46%), Query Frame = 2 
Query:   20 RVGNSILLCGTKE--GRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLA-FSLTACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEEGGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALAL 553
            RVG + +LC      G FP  C VGP+W CML TY L + P      F    D  +   +  V    L  A F++ ACSDPG+V++  E             VA+A       E G++C +C+V+RP+ A HC+DC VCV + DHHCPWTGKC+GE+ IK+FY+FL  +SLH +L+ A+ L
Sbjct:   34 RVGRTHVLCSLSRRYGYFPSTCHVGPHWGCMLVTYCLAIGPA----FFFFADDMLLGLKVALVVSICLTTASFTMVACSDPGVVFQDLE-------------VANALQGDV--ETGIICAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAVCL 195
[Close]
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: M4BNT3_HYAAE (Palmitoyltransferase n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNT3_HYAAE)

HSP 1 Score: 142 bits (358), Expect = 8.820e-36
Identity = 76/183 (41.53%), Postives = 105/183 (57.38%), Query Frame = 2 
Query:   20 RVGNSILLCGTKE---GRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLAFSLT--ACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEEGGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALAL 553
            R G++ +LC   +   G FP  C VGP+W C+L TY L + P + L++FV   D       V +  S  +   SLT  ACSDPG+V++  E             V D        E G++C +C+V+RP+ A HC+DC VC+ + DHHCPWTGKCIG++ IK FY+FL  +SLH +LV A  L
Sbjct:   20 RFGHTHVLCSLSQQHYGYFPTTCHVGPHWGCLLVTYFLAIGPFIFLMLFV---DELRLGLQVALFASMCVTTVSLTLVACSDPGVVFQDVESD-----------VEDV-------ESGIVCAQCEVRRPLDASHCSDCGVCIRELDHHCPWTGKCIGKRTIKLFYVFLTCISLHCMLVGAACL 181
[Close]
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: A0A5D6XHI2_9STRA (Palmitoyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHI2_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.160e-34
Identity = 78/185 (42.16%), Postives = 106/185 (57.30%), Query Frame = 2 
Query:   20 RVGNSILLCGTKEGR-FPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFI-VCVTGSALLLAFSLTACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEEGGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALALAPSLT 568
            R GN+ +LC       FP    +GPNW+CML TY + L P   L  F    D  +A  + + V+  A   AF++ ACSDPG+V+   E    P A+     V DA       E GV+C +C ++RP  A HC+DC VC+ + DHHCPWTGKCIG + +++FY+FL  +S+HVVLV   A    LT
Sbjct:   30 RYGNTRVLCAASGAHHFPLMWHIGPNWLCMLVTYAISLGP---LAFFFMKDDVVLALRVALLVSVVATTCAFTMVACSDPGVVFESCE----PPAT---LQVGDA-------ELGVICAQCQIRRPYDASHCSDCGVCIAQLDHHCPWTGKCIGGRTLRWFYVFLACVSVHVVLVGVTAATSYLT 197
[Close]
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: A0A6U4K2Y5_9STRA (Palmitoyltransferase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K2Y5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.050e-34
Identity = 80/191 (41.88%), Postives = 105/191 (54.97%), Query Frame = 2 
Query:   14 PRRVGNSILLCGTKEGRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLAFSLTACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEE----------------GGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLV 538
            P R  N +LL G++       C+VGP+W CML TY LILVP+   LI V    H I   I  +  S  + AF++TAC+DPGIVYR   R     AS  + AV+   P  + +                 G  +C  C+V RP GA HC DC+VCV   DHHCPW+GKCIG +N+ +F  FL +L+ H+V V
Sbjct:   32 PHRFANMVLLMGSRRSGA---CIVGPDWFCMLVTYVLILVPSSFFLINVASRMHVIVLVIGLLGASLTVWAFTMTACADPGIVYR---RRAGQRASHRSRAVSPEEPQLSTDYSSRTSMRRDDDELLRLGYTMCSICEVPRPPGAQHCYDCDVCVEDLDHHCPWSGKCIGRRNLVYFRAFLALLTFHIVFV 216
[Close]
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Match: H3H6V6_PHYRM (Palmitoyltransferase n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H6V6_PHYRM)

HSP 1 Score: 137 bits (346), Expect = 7.550e-34
Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 2 
Query:   26 GNSILLCGTKE--GRFPHHCMVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLA-FSLTACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEEGGVLCGRCDVKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHVVLVAALAL 553
            G + +LC   E  G FP  C VGP+W CML TY L + P     +F    D  +   +  +    L  A F++ ACSDPG+V+   +                +       E G++C +C+V+RP+ A HC+DC VCV + DHHCPWTGKC+GE+ IK+FY+FL  +SLH +L+AA+ L
Sbjct:   42 GRTRVLCSLSENYGYFPATCHVGPHWGCMLVTYCLAMGPA----LFFFAHDLLLGLKVALLVSICLTTASFTMVACSDPGVVFHDLQV---------------SNQLQGDIETGIICAQCEVRRPLKASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIAAVCL 201
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1733.4850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUF9_9PHAE1.910e-10579.10Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7G1J4_ECTSI3.310e-6070.95Palmitoyltransferase n=1 Tax=Ectocarpus siliculosu... [more]
A0A8J2SI51_9STRA1.460e-4346.93Palmitoyltransferase n=1 Tax=Pelagomonas calceolat... [more]
I2CS30_NANGC3.880e-3938.14Palmitoyltransferase n=2 Tax=Nannochloropsis gadit... [more]
A0A7S2V8J0_9STRA1.660e-3839.23Palmitoyltransferase n=1 Tax=Fibrocapsa japonica T... [more]
W2Q3B8_PHYPN1.900e-3641.99Palmitoyltransferase n=13 Tax=Phytophthora TaxID=4... [more]
M4BNT3_HYAAE8.820e-3641.53Palmitoyltransferase n=2 Tax=Hyaloperonospora arab... [more]
A0A5D6XHI2_9STRA2.160e-3442.16Palmitoyltransferase n=1 Tax=Pythium brassicum Tax... [more]
A0A6U4K2Y5_9STRA4.050e-3441.88Palmitoyltransferase n=2 Tax=Phaeomonas parva TaxI... [more]
H3H6V6_PHYRM7.550e-3439.66Palmitoyltransferase n=2 Tax=Phytophthora ramorum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1733contigL-elsbetiae_contig1733:15719..23928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.4
Seed ortholog evalue2.6e-51
Seed eggNOG ortholog2880.D7G1J4
KEGG koko:K16675,ko:K18932,ko:K20032
KEGG TC9.B.37.1,9.B.37.3
KEGG Pathwayko04391,map04391
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.protein-cysteine S-palmitoyltransferase activity
EggNOG OGsCOG5273@1,KOG1311@2759
EC2.3.1.225
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Ec32 ortholog descriptionZinc finger, DHHC-type, palmitoyltransferase
Ec32 orthologEc-07_001260.1
Exons6
Model size1783
Cds size501
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1733.4850.1prot_L-elsbetiae_contig1733.4850.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1733 16922..23849 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815722.23146-UTR-L-elsbetiae_contig1733:15718..169211622815722.23146-UTR-L-elsbetiae_contig1733:15718..16921Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1733 15719..16921 -
1691683059.9088085-UTR-L-elsbetiae_contig1733:15718..169211691683059.9088085-UTR-L-elsbetiae_contig1733:15718..16921Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1733 15719..16921 -
1622815722.3119307-UTR-L-elsbetiae_contig1733:23849..239281622815722.3119307-UTR-L-elsbetiae_contig1733:23849..23928Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1733 23850..23928 -
1691683059.9890304-UTR-L-elsbetiae_contig1733:23849..239281691683059.9890304-UTR-L-elsbetiae_contig1733:23849..23928Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1733 23850..23928 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815722.2434058-CDS-L-elsbetiae_contig1733:16921..170351622815722.2434058-CDS-L-elsbetiae_contig1733:16921..17035Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 16922..17035 -
1691683059.922274-CDS-L-elsbetiae_contig1733:16921..170351691683059.922274-CDS-L-elsbetiae_contig1733:16921..17035Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 16922..17035 -
1622815722.2595565-CDS-L-elsbetiae_contig1733:17928..179581622815722.2595565-CDS-L-elsbetiae_contig1733:17928..17958Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 17929..17958 -
1691683059.9303455-CDS-L-elsbetiae_contig1733:17928..179581691683059.9303455-CDS-L-elsbetiae_contig1733:17928..17958Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 17929..17958 -
1622815722.270475-CDS-L-elsbetiae_contig1733:20745..208131622815722.270475-CDS-L-elsbetiae_contig1733:20745..20813Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 20746..20813 -
1691683059.939808-CDS-L-elsbetiae_contig1733:20745..208131691683059.939808-CDS-L-elsbetiae_contig1733:20745..20813Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 20746..20813 -
1622815722.281241-CDS-L-elsbetiae_contig1733:21957..221661622815722.281241-CDS-L-elsbetiae_contig1733:21957..22166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 21958..22166 -
1691683059.955922-CDS-L-elsbetiae_contig1733:21957..221661691683059.955922-CDS-L-elsbetiae_contig1733:21957..22166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 21958..22166 -
1622815722.2914422-CDS-L-elsbetiae_contig1733:23147..232241622815722.2914422-CDS-L-elsbetiae_contig1733:23147..23224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 23148..23224 -
1691683059.96635-CDS-L-elsbetiae_contig1733:23147..232241691683059.96635-CDS-L-elsbetiae_contig1733:23147..23224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 23148..23224 -
1622815722.3015466-CDS-L-elsbetiae_contig1733:23846..238491622815722.3015466-CDS-L-elsbetiae_contig1733:23846..23849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 23847..23849 -
1691683059.978554-CDS-L-elsbetiae_contig1733:23846..238491691683059.978554-CDS-L-elsbetiae_contig1733:23846..23849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1733 23847..23849 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1733.4850.1

>prot_L-elsbetiae_contig1733.4850.1 ID=prot_L-elsbetiae_contig1733.4850.1|Name=mRNA_L-elsbetiae_contig1733.4850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
MVGPNWMCMLATYGLILVPTVALLIFVTGGDHWIASFIVCVTGSALLLAF
SLTACSDPGIVYRPAERIPVPGASGGAAAVADATPAPAMEEGGVLCGRCD
VKRPIGAIHCTDCNVCVTKFDHHCPWTGKCIGEKNIKFFYLFLGVLSLHV
VLVAALALAPSLTQHL*
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mRNA from alignment at L-elsbetiae_contig1733:15719..23928-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1733.4850.1 ID=mRNA_L-elsbetiae_contig1733.4850.1|Name=mRNA_L-elsbetiae_contig1733.4850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8210bp|location=Sequence derived from alignment at L-elsbetiae_contig1733:15719..23928- (Laminarionema elsbetiae ELsaHSoW15)
ATTCTACTGCGGTCCGAGAAGAGTGGGCAATAGCATACTGCTCTGCGGGA
CAAAAGAGGGCCGATTCCCGCATCACTGCATGGTGAGCGTCGTAAATATG
AAGTACATGCATAGAATGAAATGCCGCCCCAGGTGATTGAAACCCTCGCA
GCCGGAGAGAGCGCAGACCCTCCGCAGGGGCTCGGGGAGCGGGCAGATGT
CTGCAGGTGCTGCTGCTGCTGCTGCTCGGAGGCGTGCCCCTTGGGAAGGT
CGCTATCTAGCTCCTTTGTTGTCGGATTCGGTCTCGTTGCGTTTTTTTCG
TCGAGTTTTTTTGACACTCTGTTGTGTAGGGAGTCAACACGCCTATTTGT
GGGTGTGCGTTGAAAGGTGCTGCTGCCGTTAAACACTCTGTTGTGTAGGG
AGTCAACACGCCCACTTATGGGTGTGCGTCCAAAGGTGCTGCTGCCGTTA
GGCACTCTGTTGTGTAGGGAGTCAACACGCCCATTTACGGGTGTGCGTCC
AAAGGTGCTGCTGCCGATAACACTATGTTGTGTAGGGAGTCAACACGCCC
ATTTGTGGATGTGCTTGCGTCCAAGGTGCCGTTGCCGTGGTTCTCGCACT
AACCTGTGTACCTACACGCCTCTGAAATTTGCTCCATGTTTTTTTTACCC
TCTATTCGGCGTGCGAATGTGGCGTTACGTCACTCTTGGTTTGGTCGTTT
GCAGGTGGGGCCGAACTGGATGTGCATGCTTGCCACGTACGGACTCATCC
TTGTTCCAACGGTCGCCCTCCTTATTTTTGTGTGAGTCTCAGCATTTTGT
TTTTAATTGATGTATACAAATGTCAGCAGTCTACGTCCGGTCTGTGAAAA
TATCGTTCCAGAGGGATCTGTTGTAGGCATACTTGTTTTTTTCTTGTTTT
TTCTTCTTCACATTTATTTCCAGTGCTCGATGGGCTGCTTGCTCCCTGTC
ACGAGGACATCTTGCCAGAGTACTCAACCGTGGTCCCATAGAAGGGTTAT
TTTCCCCGAGGCCCCCACCCCCCCCGTCTGCGGTGCTTGCCTACGGTTTT
TGTCGTCGCGAGAAGGGTTCAGCCGTCCCTTTCCCTCGACGACGGTGTGG
TCTCGAAGTTTGGGGCACAGCAGTAAATACCGCAAGCACGGGGGGGGGTT
CTCCCGTTCATTTGCAGTGATGCTCCTATCTTGCAGGCCGGAAGAGACAG
GCATGGAGAGGCATCGGCGTCTCCTGGAGCTGTTGTTGTTGTTGTTGTTG
TTTTCGTCACATTATAAACCGTTCCGATCTCTTCACCCAGTGACTCCTCC
CGATGCGCGTACTATTCCAACACTTGATGAGGTCAATTCCTGTGGTCACA
GGCTGACGTATGTATACCTCAACAGAGATACACGAAAGTGAAATGAACCC
GAAGGTCAGCAAAGCGATAAAAAAAAGGGGGTGATATTTTGAAACCCCCG
TACGGCTGTTGTACGCGCTTGTGAACAGTCCTCTCCACCTCAGGCCTCCC
AATTGTTAGCTACCGCTGGCGTGAACCTCTAGTCGATCGTGGGATTTTTC
GCAGTATTTGTTTTTCCGCCTTGTGCGAGGATCATTCTTGTCCACGGGGC
CCCACCGCTAAACCGTCGGAAAAGAAAATAAACAAATAATGTCCCGACGC
ATGTGCATCGCTCAGCTCTCAATCTGGCACACCTTCTCCCGTCCATGCGC
CTCACGAGCACCCTCCCCGCCCCCCTCCAACGACACACGGTGCATCCAAT
GGCGGGGCGCAGAACTGGGGGGGATCACTGGATAGCTAGTTTCATCGTTT
GCGTTACGGGGAGCGCGCTGCTGCTGGCGTTCTCGCTGACGGCCTGCAGC
GATCCCGGCATCGTGTACCGCCCGGCGGAAAGAATACCGGTGCCGGGTGC
GAGCGGGGGCGCCGCCGCCGTGGCGGACGCGACTCCGGCGCCTGCGATGG
AGGAGGGGGGCGTGCTTTGCGGTAAGTGTGCTCGTGGAACCCCTCTTTTG
CGCTCCTTGGAGTGCGTCTAGAGCTGCCCCTATGCCTGCTTGCTTCGGTT
TTGGAGCTGAGAGGTTGTGCTTTTTATTCGCGTTTGTGGCGTAAGTTTCG
CTATTTTGTGCCCTGTTTTTTTGGATTTTACCCTGGGCGATGGGTAGCCG
CTTTGTACCGGCAGCTTCGGGTGGCGCGTCACGCGGCGCTGGAACATGAC
CGCTGTCCTATCCAGCAGCAGAATTCATGGCGTCTCGCACTCTACACACC
CTGGACCGACTTTTCGGAGCTCGATTGCTCCGCAACAGCAGTGGGGGGGG
GGGGGGGGGGGGGGGCCCCCGGGGGGCCCCGCGGGGTTGGGGGGTTCTTT
TCTAGATATCCGCGAAGGGGGCTACACAGGACGGCTGGTGNNNNNNNNNN
TCTTTCGGCACGCGCCCTCCCCCCCCCCCCTCCCCCCCCGCCGCGGCGGG
GTGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGCGAGGCCCCCGAGGGGCCCCGCGGTGTTTGGGGTTTCTCTTCTAGA
TATCCGCGAAGGTGTCTACACAGGACGGCTGGTGTTGAAACAGCCCTCAC
TCTCTCAGAGCGAGCAACGCCAAGATTTCGACTGACTGGGGAGAGTATTA
TTTGCGACATTCAGCGAGCTATTGGCTGCCGATGTTGTCGTTGTCGTCTT
ATATGTAGCACGAACATGTTGGCTCCCTTCCCCTTCCGGTCCGACTTTGC
CAGCCAGGCAGCTTGGCACTACACCGCTAAATACAATACAGGCAACGGCC
GACGCGTCGTTTTCTGTCTGGCCTCAAATCTCCCTCCCAGTTAGTTCGCC
GGGTGCTCGCTGTTTCAGAACGTGCTTCTGTTTCCACTCACTGCCTACAT
CGTTGGAGCCTGTGGCCCGCGGAATAGCTCCCGATCGGTTTAGGCCAGCA
CGTATGCATGTAGGAGTATGTAAGCACTCGGCCCTGGGCGGTACATTCAA
GGGTTTGGACGTTGTTGAAACAACCAACACAACAACAGCAACATCACCAA
CAACAACAACAGCAGTGGCATCAACAACAGCAACAACGAACCCCCTCGTC
TCATGAATTCTGCAGGTCGGTGTGACGTCAAGCGACCGATCGGGGCAATC
CACTGTACAGACTGCAACGTCTGCGTTACCAAGGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTATATACGCCGAACTTCCATGTGCCGTGTGCTCG
TCACTTTTGCTCGATACATAGGATGGGGGTATGTAGTCGTCGATGTCCGG
GGCCCCCAGAGAGAGTTTTCGGTGGGGTGCCGAGGAATACCTGAAGCGGC
ATTTATTGCCTTGCTCACCAGGTACCATACTTTTGTTCGTTACTTTTTCC
TCACTTGTGTATCGTTCTGCCGCTTGCATCGTTCGGGTTCGCCGAACCCG
AGCAGGGTGCGACTACCACTATTGTACTGCTGGACTGTTGCGGCGGACCA
ATCGAATCCACTCCCTCGCTTTAATATTTTTGGCCGGGGTGTATCCGCTC
TCCTCCGACGAAGGATTTCGGTTTATGATGTTTTGATGAGTTTGACTGGA
GAAGAAAAATCGCATACCGAGGCGCTCAGCGGGTATGTTGACACGAGCGG
GCAGGACGGCCGAACTCTGTGTCGGTGTTGAGTTGAGGACGTCACCCGAA
TATAGAAGAGGATATCGGTGGAATGGGCGTTGTACTGCAAACAAACGCTG
CTTCCGCAAGCGGGTGTCTATTTTTTAAACTCTGAAGTTCAGGTGCCGTA
CACCCATGGTCGTGTCGTTTGAAGATTGTTGGAAGATTGCAGCATTTGCC
CGAAGCCTGCATGCTGACGTCGGCAATATTGCATTTGCCCAAAGCCTGCA
TGCTGATGTCGGCAATATTGCATTTGCCCGAAGCCTGCATGCTGACGTCG
GCATCGAGACTCGAAAAAATCCCGCGCTTCTCATCAATTTCAATATACGT
CAACCATCATGTCAACCCCATCATGACCGCCTAGGACGTTTGAGTGGTAA
TATCTCGGGTCTCAGGTGGAATCTCGAGATGAGAGTTGTTGCGTTGGATT
GCATACATTCCAGGGATCAATAAGCACGTGTAAAAAATATTAGACTCATT
TGTGTGTGAGAGCGCCAAAAATAACATGGGAAAGCTCCGGTATCATGGCG
TCAGGCATTGGCTTCACTTGATAAATGAATGGGTGACGTCCCCGGAGATG
GGAAAAAACGACTTTGCACAGCCGTAGCTCAGCCCAAACATCGAGCCTGA
AGATGGGAGTTGCAGCGTTGGGATGGATAAATTCCGGAGAGCAGGATGCA
GCTTAAAAAAACAAAAGAAGTATTTGTGTGCGAGAACACGTTAAAGATTG
CGGGGAGTTCCACGTATCAGGAAGAGCAGAAAAGCTTCACTTGATAAATG
AAGGGGTGACGTCTCCGGAAATAGGGAAAAACGATTTTGCACAGCCGTAA
CTCCGCCCAAACGTCGAGCCCGGAGGTGGGAATTGCAGCGTTGGGATGGA
TACATTCTGGAGAGCAGGATGCAACTTTATAAAAAAAAAAAATATTTGTG
TGCGAGAACATGGTTAACGATCGCAGGAATTTCCGCGTAGTAAGGAAGAA
TCAAAATACATGTTTACGAGGAAAGCACGGCATCGCATTCGTGTGGCAGC
ATTTAGTGCCGGACGAGATGTCCCCGATCCTGGCTGGCTGTGTTTTTAGC
GCCAACGACAACCAAATCCGCAGAATGAGCTTTGTTGTTTTGTCCCGCCT
GGCCCGGTCCCCCGGTGGAAGTGGCGTGCAGCAGGGCACAGGACGTCGCG
GGCAAAATACCTGTTGCGGGTCGCTTTTGGTGGGCGACAGGCGGGACCGG
ACCGCCTACGCCGAAAATTAAGTTTATCTAGGAAAATAACCCTAACCCCA
AGAAGAAAAAGCCCCAGTGTTCACCCCCTCCTGTGTGACCCCGGTTGGTT
CTAGTTATACAGACGAATGCGCTGCGAAGTGTAGCACCTCTCTAAGTACA
CCGCAAGGTGTAGTACACGTCTCCACTTGGGGGGACTGTCGCCAAAATAA
ATGGGAAGGACACACACACAACCACTGACCCCCCTTTCCCGGTTTCCAAG
GGGTCACCCAGGCGACAATACTGGAAGCACACCCCCCTGCCTCCCTGTTT
TTTGGCCCTACCGAGGCTTGGGAAACATATAGAATTTAAAGTAAGGGGGG
GCCGTTCGGGGGCATATACCCCCGGCTAAAATCGCCCCCTTAATAATACC
AGCTGAGGGCCCCCTTTCTTTTGTATAGGTTTTAGTATACCCCTCCTCCC
CGGATCCGGCCATATGAAAGTTTGGGGGTGTGCTTCCAGCCCTGCAATCC
TGGTGACCCCCTTTTCCCGGTTTCCATACTTTTATCTCATATGTGCTGAA
GACGAAAACCCTGCGTAGACTACTGCGACAGGTAGCAGCAACCAGTAGTA
CAAGAGCAACAGAAAGATATCCCCCGTGCGTACAGCAAGCAGAATGGTGC
CCCTGGAATGCAGACGGCCTCACACTGCAGCCTCGCTTCAGATACCCGTC
ATCTGGGGATGTTATTCACGGTTACCCCCCGTTATGCGGCTCATCGAGAC
TCGTCCCGGCGGTTCCCATCTGGGTGCCCCCCTCGTGGTCGGCTTTGCGA
GCGTCCCCCCCCCCCCCGTGTTGCAAGAACTGGAGGTTTCCGTGGGTAGA
TAGCCTGCGTCGGTGATGTATTTATCGCATAAAACCAACACGCGCACATG
CCTGTACGCCCCGCCGCCCTCCCCCCCCTGCCTGCTGCCGTTTGTTTATC
CGGGCGCGGGGGCGTGTCCTGCTTCGCGATGGAACCTTGTGGGCCAACCA
ACACTTGCTTGGCTGGGTTTCGGTTGCCGCCCTGCACCCGGGGTTTCCAA
TCGTTCGCCTCGGAACGCAGTTCGACCACCACTGTCCTTGGACGGGGAAG
GTAAGAGACTGAACGTTGACCAGGCAGTGCCTGTGGAGGGGTCCCCGCTA
CTGTGTTCCCCTCGCCGATGCGACGTGCCGGGCAGTTGTCTGTTGTGTGT
GTGTGTGTGTGTCTTTTCGTCCCATTTGTTCGGGCCGCCTGCCACACGTT
TCGGTGTGTGTACAACGTGCACGCGCTTTCAACTGCATGTTTGCGAATTT
TTCACCCCAGAGGGATTCGAACTCACGGCCTTTGCTACTAGCGGGTTTCG
AGGTTACCTACTAGACCACCGGGGCGATCGCCTACGCAGGGTTTTTGTCC
TCAGCTAACATATGAGATATGAAGTATGGAAACCGGTAAAGGGGGGTCGG
TGGTTGGGGTTATTTTCCTAGATAAAACTAAATTTACGGCGTACAATAGG
CGGTCTGTGCCGGGAGGTGTGTCCAAATATGGACTGAGCACGGCAACGGA
GTGGGGAAGGGGAGCAGCAGTGGCGATGAAGGGGAGCACCGGCGTTTTTT
CGTGTAGGGGCGCGAAGACTGGATGCTTGCAGAGTGTCGGGAAAAGTTTG
TCGGCACTCTGTTGCTGGCGCTGATGTTTGTTTGTTTTCGCAGTATTTGT
GTGTTCGAAGGCGTCAAAGGGGTTGGCCGGCCTGTTGGTGTCGTGCAAAG
AGAGAACTTGATGTTTGATATACTTGATGCTTTTGCTGTCGGCTCGGCCA
GTGAGACAGGTCGAGGGTACGGGTCGAGCAACCATTTTTTCTGAGTACGA
TCCCTCTCCTCTTACCCCCGCGCACCCCGCATGTTTTCGGTTCTTCTTCT
CCCTTGTTGTTGCTTCTTTTTTTCTTCTTTCTTCCCCGTTTTTTGGCCCC
GTGTATCGTATCGTACTACCAACCCGTGCATCCATCCACCCAGTGCATCG
GCGAGAAAAACATCAAGTTCTTCTACTTGTTCCTGGGCGTCCTTAGCTTG
CACGTGGTCCTCGTCGCTGCGCTTGCGCTGGCGCCGTCGCTGACGCAACA
CCTCTGAGGCCACGGTAAATCAGCCCACTCCGGTTGTGGTGGCGTCACGT
CATCGTCCTGGGGGGATGTCGCGGCTCGCGTATGAGCGTGAAACGCTATC
GTCAGAGCTTGTTGTTGCTTCACACAAAAAAATGCCCACGGCCCTTTTCT
CCGAATTGGCCCAACAGACTGCGGGCGGCGTCGAGAAGTCCTGAGTTTTT
GCGACTCCAGCCCGGATAGTGGCGGATTAGGGGCTCGCCATCGGGCCTGT
TTCGCTGGTCTGCGCAGCCGTGCGATGCACAAGTTTTGGTACACAACCGC
TTGATTAAAGGCAGTAGTGATAGAGAGACGAGACAGCCTTCTCTGCAGCG
TTGTGACAAAAATAAAATAAAATAAATGGGTGTCTAAGCACCAGGCAGAA
AGCGTGTGCTCCCGCAAGCAGCTGTACGTACCAGCGGCCCGTCGCTCTAC
ATATGTAGACGCACACGCGCGCGCAGCCACCGGGAAGTACCCACATGTTG
AAAGTTCCAGTCGGTAGGATCACGCCGCGACACTGCCGCGGCGCGTGTGC
AGCGCACTTGCTTGCCAATCGGAGCGACCTAGTTATGTACGTATGTATGT
ACATCCATTTTTCCCAGCGACATCTATACCTACATTAATGCATTGTACAT
ACCTGCATGGTGCTTTGTACCTATGTTTGGACATGTCGCAACCGGAAGGA
TTGATGAAGATTTGAGGGGTTGCGATTTCTGCAGGCGAACCTGGAGATCA
AGTGCCAACCCAAAGGGTTTCCTCAGCGGGGGGGGAGGCGTTTTTTGAAT
CGCTTTTTTAGTGTGCTGGAGCCTCCCCTCCGAAAAAAAGTTTGTCCTGC
CGGCCCCCTCGAGATGCAGGCCCAGGTGGGGCCCCCTCGAATGGTGGTGT
TGATGCGTAGGGAGGGGGGAGGGGTAGTGCTCTGTTCCTGCTTTTCGCTG
GCAGAGCTCGTTCAGGTTTCGGTAATGTTTTTGCGGGGCAGATCGTGATT
GCGGTGACGTAGGTACGGGGATATGTATGGGAAAGAACGGACCGGTGTTT
GTTCCCGGCCGCGATCACGTATGTAGTGCATTGCTTGGTCACTTACCGTA
GGTGACACAAGATACCACACCCCCTCGACAGATTTTCAAAGCTCGATTCC
TCCCCCGCCAGAAGAGTGCCAGTGCCAAAAAGGGCGGCGTTGGAAATACC
TAGTCAAGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1733:15719..23928-

>mRNA_L-elsbetiae_contig1733.4850.1 ID=mRNA_L-elsbetiae_contig1733.4850.1|Name=mRNA_L-elsbetiae_contig1733.4850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig1733:15719..23928- (Laminarionema elsbetiae ELsaHSoW15)
ATGATGGTGGGGCCGAACTGGATGTGCATGCTTGCCACGTACGGACTCAT
CCTTGTTCCAACGGTCGCCCTCCTTATTTTTGTGTGGGGCCGAACTGGAT
GTGCATGCTTGCCACGTACGGACTCATCCTTGTTCCAACGGTCGCCCTCC
TTATTTTTGTAACTGGGGGGGATCACTGGATAGCTAGTTTCATCGTTTGC
GTTACGGGGAGCGCGCTGCTGCTGGCGTTCTCGCTGACGGCCTGCAGCGA
TCCCGGCATCGTGTACCGCCCGGCGGAAAGAATACCGGTGCCGGGTGCGA
GCGGGGGCGCCGCCGCCGTGGCGGACGCGACTCCGGCGCCTGCGATGGAG
GAGGGGGGCGTGCTTTGCGAACTGGGGGGGATCACTGGATAGCTAGTTTC
ATCGTTTGCGTTACGGGGAGCGCGCTGCTGCTGGCGTTCTCGCTGACGGC
CTGCAGCGATCCCGGCATCGTGTACCGCCCGGCGGAAAGAATACCGGTGC
CGGGTGCGAGCGGGGGCGCCGCCGCCGTGGCGGACGCGACTCCGGCGCCT
GCGATGGAGGAGGGGGGCGTGCTTTGCGGTCGGTGTGACGTCAAGCGACC
GATCGGGGCAATCCACTGTACAGACTGCAACGTCTGCGTTACCAAGGTCG
GTGTGACGTCAAGCGACCGATCGGGGCAATCCACTGTACAGACTGCAACG
TCTGCGTTACCAAGTTCGACCACCACTGTCCTTGGACGGGGAAGTTCGAC
CACCACTGTCCTTGGACGGGGAAGTGCATCGGCGAGAAAAACATCAAGTT
CTTCTACTTGTTCCTGGGCGTCCTTAGCTTGCACGTGGTCCTCGTCGCTG
CGCTTGCGCTGGCGCCGTCGCTGACGCAACACCTCTGATGCATCGGCGAG
AAAAACATCAAGTTCTTCTACTTGTTCCTGGGCGTCCTTAGCTTGCACGT
GGTCCTCGTCGCTGCGCTTGCGCTGGCGCCGTCGCTGACGCAACACCTCT
GA
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