mRNA_L-elsbetiae_contig173.4832.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: D7FTI7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI7_ECTSI) HSP 1 Score: 132 bits (332), Expect = 1.710e-38 Identity = 74/111 (66.67%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 1 MARRAVSVEIFAAGDGINYPQK------------------------------------VVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 MARRAVSVEIFAAGDGINYPQK VVPGLD+GVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN Sbjct: 1 MARRAVSVEIFAAGDGINYPQKGQTVTVHYTGYLEDGTQFDSSRNRGKPFKFKLGSEQVVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 111
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: A0A7S2C1G0_9STRA (Peptidylprolyl isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1G0_9STRA) HSP 1 Score: 107 bits (268), Expect = 9.590e-29 Identity = 61/111 (54.95%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 1 MARRAVSVEIFAAGDGINYPQK------------------------------------VVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 M R V+VEIFAAGDGINYP+K V+ GLD+GVSQLSIGERAK++IPAA AYG RGFPGLVPP S LVFDLELITFN Sbjct: 1 MPRHDVAVEIFAAGDGINYPRKGQTVTVHYTGYLPDGDTFDSSRDRGKPFKFKLGAEQVILGLDQGVSQLSIGERAKISIPAALAYGERGFPGLVPPDSELVFDLELITFN 111
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: A0A6U1QP22_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QP22_9STRA) HSP 1 Score: 102 bits (255), Expect = 9.660e-27 Identity = 57/106 (53.77%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 16 VSVEIFAAGDGINYPQ------------------------------------KVVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 V VEIFAAGDGINYPQ +V+ GLDEGVSQLSIGERAK+TIP+ YG RGFPGLVPP+S LVFDLELITF Sbjct: 8 VKVEIFAAGDGINYPQPGKTVTVHYTGFLPDGTQFDSSRDRGKPFKFKLGAEQVISGLDEGVSQLSIGERAKITIPSQKGYGERGFPGLVPPNSQLVFDLELITFT 113
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: F0YHE6_AURAN (Peptidylprolyl isomerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHE6_AURAN) HSP 1 Score: 101 bits (252), Expect = 2.690e-26 Identity = 54/109 (49.54%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 7 RRAVSVEIFAAGDGINYPQK------------------------------------VVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 ++ ++VEIFAAGDG+NYP+K V+PGLD GVSQLSIGERAK+ IP AYG RGFPGL+P +SAL+FDLELITFN Sbjct: 4 KKDIAVEIFAAGDGVNYPRKGQTVTVHYSGYLPSGDMFDSSRDRGKPFKFKLGGEQVIPGLDAGVSQLSIGERAKIVIPPDMAYGDRGFPGLIPRNSALIFDLELITFN 112
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: A0A8J2T2V8_9STRA (Peptidylprolyl isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2V8_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.590e-25 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 16 VSVEIFAAGDGINYP------------------------------------QKVVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 ++VEIFAAGDG+NYP ++V+PGLD GVSQLSIGERAK++IP+ AYG RGFPGL+P +SALVFDLELITF+ Sbjct: 8 IAVEIFAAGDGVNYPRQGQTVTVHYSGYLPNGEIFDSSRDRGKPFKFKLGGEQVIPGLDAGVSQLSIGERAKISIPSDMAYGERGFPGLIPRNSALVFDLELITFS 113
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: A0A836CL56_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL56_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.070e-22 Identity = 41/55 (74.55%), Postives = 51/55 (92.73%), Query Frame = 1 Query: 61 QKVVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 ++VVPGLDEG +QLSIGERAK+T+P + AYGA+GFPGLVPP+S LVFD+ELITF+ Sbjct: 54 EQVVPGLDEGAAQLSIGERAKITMPPSMAYGAKGFPGLVPPNSTLVFDMELITFS 108
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: A0A485LR83_9STRA (Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LR83_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.530e-22 Identity = 48/106 (45.28%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 16 VSVEIFAAGDGINYPQK------------------------------------VVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 V VE+F AGDG+NYP+K V+PGLDEG+ QL + ERAK+ IPA AYG +GFPGLVPP++ LVFD+ELITF Sbjct: 21 VQVEVFVAGDGVNYPKKGQTVVVHYTAYLQDGKKFDSSRDRDKPFKFKLGAEQVIPGLDEGIEQLCMKERAKIYIPADKAYGKKGFPGLVPPNTNLVFDIELITFK 126
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: K3WSB6_GLOUD (Peptidylprolyl isomerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSB6_GLOUD) HSP 1 Score: 90.9 bits (224), Expect = 6.210e-22 Identity = 48/106 (45.28%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 16 VSVEIFAAGDGINYPQK------------------------------------VVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 + VE+F AGDGINYP+K V+PGLDEGV +L + ERAK+ IPA AYG +GFPGLVPP+S L+FDLEL+TF Sbjct: 16 IQVEVFIAGDGINYPKKGQTVVVHYTGYLQDGRKFDSSRDREKPFKFKLGAEQVIPGLDEGVERLCMKERAKIFIPADKAYGRKGFPGLVPPNSNLIFDLELLTFR 121
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: A0A024TRW9_9STRA (Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TRW9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.010e-21 Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 16 VSVEIFAAGDGINYPQK------------------------------------VVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 + VE+F AGDGINYPQK V+PGLDEG+ +L + ERAK+ IP+ AYG +GFPGLVPP++ LVFD+ELITF Sbjct: 21 IQVEVFVAGDGINYPQKGQTVVVHYTAYLQDGKKFDSSRDRDKPFKFKLGAEQVIPGLDEGIERLCMKERAKIYIPSDKAYGKKGFPGLVPPNTNLVFDIELITFK 126
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Match: A0A7S1CR57_9STRA (Peptidylprolyl isomerase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CR57_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.920e-21 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 1 MARRAVSVEIFAAGDGINYP-------------------------------------QKVVPGLDEGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225 M++ V+VEIF AGDG+NYP ++V+ GLDEGV+QLSIGE A++ IP+ AYGA GFPGLVPP+ L FD+ELI+F+ Sbjct: 13 MSKGRVTVEIFKAGDGVNYPKPGNVVTLHYTGYYGRAQTEFDSTRTRGKPFKFKLGAEQVIEGLDEGVAQLSIGEHAQIHIPSEKAYGAHGFPGLVPPNKDLTFDVELISFS 124 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig173.4832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig173.4832.1 >prot_L-elsbetiae_contig173.4832.1 ID=prot_L-elsbetiae_contig173.4832.1|Name=mRNA_L-elsbetiae_contig173.4832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=76bp MARRAVSVEIFAAGDGINYPQKVVPGLDEGVSQLSIGERAKVTIPAASAYback to top mRNA from alignment at L-elsbetiae_contig173:40148..42057+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig173.4832.1 ID=mRNA_L-elsbetiae_contig173.4832.1|Name=mRNA_L-elsbetiae_contig173.4832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1910bp|location=Sequence derived from alignment at L-elsbetiae_contig173:40148..42057+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig173:40148..42057+ >mRNA_L-elsbetiae_contig173.4832.1 ID=mRNA_L-elsbetiae_contig173.4832.1|Name=mRNA_L-elsbetiae_contig173.4832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=456bp|location=Sequence derived from alignment at L-elsbetiae_contig173:40148..42057+ (Laminarionema elsbetiae ELsaHSoW15)back to top |