mRNA_L-elsbetiae_contig17243.4808.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17243.4808.1
Unique NamemRNA_L-elsbetiae_contig17243.4808.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 1.380e-113
Identity = 257/608 (42.27%), Postives = 334/608 (54.93%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            ++E+  TPA TRS+ K     R G      PG FALLA E+E+ R++     P   +P  P  LV D+ TP+T  EA +GP+   +  A   E  G +A  TF E      Q G N+I  +WVYSWKGD  G+ +  KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L     H    QAFVQSELDEVV++R+P  CGA SGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q  G   + +                  R + L T    Q++V         VT  +ET   +   L +        P    P   LV  L  L       +  + R  A     P RL   +           M  R  +G  +      F   ++ G H           ++  +  A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct: 1308 QREFVATPAVTRSRAK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE------QRGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDSCHFYAEQAFVQSELDEVVFIRLPPACGARSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 1875          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE)

HSP 1 Score: 367 bits (943), Expect = 5.840e-112
Identity = 240/583 (41.17%), Postives = 310/583 (53.17%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLLVTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            ++E+  TPA TRS+ K     R G      PG FALLA E+E+ R++     P   +P  P  LV D+ TP+T  EA +GP+   +  A   E  G +A  TF E                      GD  G+ +  KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L   L H D  QAFVQSELDEVV++R+P  CGALSGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q             +E  R M  S L        LR+  G           C  PR              V+  +T+            +  + G+T+     P+       +     P            +     S  G L W     R  +       + +  +  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q  DFLTKPL +      R F +N+
Sbjct:  261 QREFVATPAVTRSRAK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-----------GVELNRYMPISNL------GELRWYAG-----------CHFPR------------DTVLGTVTISQQAVAEK----IVAKFGVTTDKE-TPMVVGLKLEQYDADEP-----------DVDEPFRSLVGYLMWLANQIRPDILNAATDRRSVSWALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRPDFLTKPLPKETFCANRDFVINI 755          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 1.310e-110
Identity = 250/608 (41.12%), Postives = 325/608 (53.45%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            ++E+  TPA TRS+ K     R G      PG FALLA E+E+ R++     P   +P  P  LV D+ TP+T  EA +GP+   +  A   E  G +A  TF E                      GD  G+ +  KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L   L H D  QAFVQSELDEVV++R+P  CGALSGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q  G   + +                  R + L T    Q++V         VT  +ET   +   L +        P    P   LV  L  L       +  + R  A     P RL   +           M  R  +G  +      F   ++ G H           ++  +  A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:  248 QREFVATPAVTRSRAK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 799          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 8.040e-110
Identity = 249/608 (40.95%), Postives = 324/608 (53.29%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            ++E+  TPA  RS+ K     R G    GL G FALLA E+E+ R++     P   +P  P  LV D+ TP+T  EA +GP+   +  A   E  G +A  TF E                      GD  G+ +  KARL ARGF QR G+DFFETFSP P+++SIRLLAAIAC L   L H D  QAFVQSELDEVV++R+P  CGALSGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q  G   + +                  R + L T    Q++V         VT  +ET   +   L +        P    P   LV  L  L       +  + R  A     P RL   +           M  R  +G  +      F   ++ G H           ++  +  A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:   24 QREFVATPAVPRSRAK-----RDG---PGL-GTFALLATEDEINRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPYPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 575          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 1.300e-96
Identity = 238/619 (38.45%), Postives = 307/619 (49.60%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMG--STHVPDPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLLVT----RCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTG---------RPLCMS*CMFGGR---SISGLHFSGEGTLTWCCMWTRTL---LARRRAGSQCL------------------GGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            R+++ VTPA TRS          G   TG+PGAFALLAA+E+M R++   +  + DP  PN LV D+ TP+T  +A +GP+   +  A   E++G  AA TF  +  G+                                                        IRLLAA+AC LGL L H D  QAFVQSEL E VY+R+P+ CGALSGK++RL RSLYGLKQASRTWHK LVR MK LGFEQC AD CVMRLI  G + M VVVHVDDI S+G ++RCEQ                 R + E V +      R    +RF R   + T+  S                 ++    N +      R   T    P  +G+      A  P    P R   G         RP  ++      R   +   +H+     +      TR     L R  AG   L                   G   +    C  +FS+TQ+SV  +++EAEY A+A G+KE  IF+RY+WSF  PD +VGCT + EDN  A++LA NPA TPNSKH+D+RHHF R+RVDRGEFK+V+VP+  QHADFLTKPL + A  + R F MNL
Sbjct:  598 RQQHEVTPAVTRS----------GSRRTGMPGAFALLAADEQMTRSLSGPTADIDDPALPNGLVADLETPETYKQAHAGPHDVIWRAAERKEIAGLSAAGTFETMAAGD--------------------------------------------------------IRLLAALACELGLDLCHFDAEQAFVQSELVECVYLRLPQGCGALSGKIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFG---------------RDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLS-----------------QQTYATNMVAKFGVTRNKET----PMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEA-IFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 1113          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KG18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG18_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 6.920e-96
Identity = 200/447 (44.74%), Postives = 246/447 (55.03%), Query Frame = 1
Query:  475 LCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLL---VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHL-DIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            L ARGF QR GIDFFETFSPCP+V+SIRLLAA+AC LGL L H D  QAFVQSEL E VY+R+P+ CGALSG ++RL RSLYGLKQASRTWHK LVR MK LGFEQC AD CVMRLI  G + M VVVHVDDI S+G ++ CEQ            F    R   E+++    VTR +ET                        P  +   L            P   L      L  +     LT    +   +  P+                     +H+     +     +T       + G+  +GG                ++SV  +++EAEY A+A G+KE  IF+RY+WSF  PD +V CT V EDN  A++LA NPA TPNSKH+ DIRHHF R+RVDRGEFK+V VP+  QHADFLTKPLH+ A  + R F MNL
Sbjct:   40 LVARGFGQREGIDFFETFSPCPSVTSIRLLAALACELGLDLCHFDTEQAFVQSELQECVYIRLPQGCGALSGNIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGIMAMVVVVHVDDIFSIGRKSWCEQ------------FGRLERTYAENMVAKFGVTRNKET------------------------PMAVGVKLEEFDACEPDVDEPFRSLVGHLMWLANQTRPDILTAVRAVARYSYAPK--------------------SVHWKAALHILMYIRFTSAFGITFQRGT--VGGVSL-------------EKSVMLSSTEAEYAAMADGMKEA-IFLRYLWSFIFPDGDVVCTVVKEDNVGALHLANNPATTPNSKHIIDIRHHFIRERVDRGEFKVVFVPSHLQHADFLTKPLHKEAFSVHRNFVMNL 414          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 6.730e-95
Identity = 229/586 (39.08%), Postives = 300/586 (51.19%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLL---VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            ++E+  TPA  RS+ K     R G      PG FALLA E+E+ R++     P   +P  P  LV D+ TP+T  EA +GP+   +  A   E  G +A  TF E                                           R G+DFFETFSPCP+++SIRLLAAIAC L   L H D  QAFVQSELDEVV++R+P  CGALSGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q V                   E ++    VT  +ET   +   L +        P    P  LLV  L  L       +  + R  A     P RL   +           M  R  +G  +      F   ++ G H           ++  +  A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+R++W F  P R+VGCT V+EDN  A +LA   A TPNSKH+DIRHHF R+RV RGEFK+VH  +  Q ADFLTKPL +      R F MN+
Sbjct:  500 QREFVATPAVMRSREK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE-------------------------------------------REGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQAVA------------------EKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRLLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMFVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRHLWKFVFPGRDVGCTPVWEDNVGAFHLASKSASTPNSKHIDIRHHFIRERVARGEFKVVHARSDLQRADFLTKPLPKETFCAHRDFVMNI 991          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 7.140e-93
Identity = 244/660 (36.97%), Postives = 316/660 (47.88%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNML--------------------------------VTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TST------------------FR*SFLET*RCMQESVLL-------VTRCRET-----LRFLRGLL---------------RRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            ++E+  TPA TRS                 PG FALLA E+E+ R++     P   +P  P  L                                V D+ TP+   EA +GP+   +  A   E  G +A  TF E                      GD  G+ +  KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L   L H    QAFVQSELDEVV++R+P  CGALSGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q  G   +                   FR + L T    Q++V         VT  +ET     L+   G L                              P   LV  L  L       +  + R  A     P RL   +           M  R  +G  +      F   ++ G H           ++  +  A +    + + G+  +    C  Y  +TQ+S   +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSK +DIRHHF R+RV RG FK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:  504 QREFVATPAVTRSG----------------PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDLETPEIYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFHAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFFRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEHGTLDVAGESDSXXXXXXXXXXXXXXXXXXXVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSGTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKQIDIRHHFIRERVARGGFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 1103          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 7.970e-93
Identity = 216/534 (40.45%), Postives = 276/534 (51.69%), Query Frame = 1
Query:  277 AEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803
            A AS G     +  A   E  G +A  TF E                      GD   + +  KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L   L H D  QAFVQS+LDEVV++R+P  CGALSGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q  G   + +                  R + L T    Q++V         VT  +ET   +R  L +        P    P   LV  L  L       +  + R  A     P RL   +      L        CG           F   ++ G H           +   +  A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+ E  IF+RY+W       +VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:   76 AMASDGXXXXIWTNAERKEFFGLNAVGTFEE----------------------GDEFVYAVSAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSDLDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFDVTTEKETPMVVRLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHV--LMYVRFTSGCGI---------TFQRGTVGGDHME---------LLVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMTEA-IFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 562          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 2.640e-77
Identity = 152/284 (53.52%), Postives = 190/284 (66.90%), Query Frame = 1
Query:   64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQ 906
            ++E+  TPA TRS+ +     R G      PG F+LLA E+E+ R++     P   +P  P  LV D+ TP+T  EA +GP+   +  A   E  G +A  TF E        G N+I  +WVYSWKGD  G+ +  KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L   L   D  QAFVQSELDE+V++R+P  CGALSGKV+RL RSLYGLKQASRTWH  L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q
Sbjct: 1190 QREFVATPAVTRSRAR-----RDGPG----PGIFSLLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEER-------GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCPFDAQQAFVQSELDEIVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQ 1457          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAC2_9PHAE1.380e-11342.27Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K0K7_9PHAE5.840e-11241.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGK7_9PHAE1.310e-11041.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWG1_9PHAE8.040e-11040.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE1.300e-9638.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KG18_9PHAE6.920e-9644.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAQ1_9PHAE6.730e-9539.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JMP2_9PHAE7.140e-9336.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5L3_9PHAE7.970e-9340.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KBJ6_9PHAE2.640e-7753.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17243contigL-elsbetiae_contig17243:1059..3475 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score84.3
Seed ortholog evalue6e-14
Seed eggNOG ortholog7070.TC002223-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,3SH01@50557,41WYJ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons1
Model size2417
Cds size528
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17243.4808.1prot_L-elsbetiae_contig17243.4808.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17243 2337..2864 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815718.9456782-UTR-L-elsbetiae_contig17243:1058..23361622815718.9456782-UTR-L-elsbetiae_contig17243:1058..2336Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17243 1059..2336 +
1691683057.8692687-UTR-L-elsbetiae_contig17243:1058..23361691683057.8692687-UTR-L-elsbetiae_contig17243:1058..2336Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17243 1059..2336 +
1622815718.9681737-UTR-L-elsbetiae_contig17243:2864..34751622815718.9681737-UTR-L-elsbetiae_contig17243:2864..3475Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17243 2865..3475 +
1691683057.8947208-UTR-L-elsbetiae_contig17243:2864..34751691683057.8947208-UTR-L-elsbetiae_contig17243:2864..3475Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17243 2865..3475 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815718.9569995-CDS-L-elsbetiae_contig17243:2336..28641622815718.9569995-CDS-L-elsbetiae_contig17243:2336..2864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17243 2337..2864 +
1691683057.8841665-CDS-L-elsbetiae_contig17243:2336..28641691683057.8841665-CDS-L-elsbetiae_contig17243:2336..2864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17243 2337..2864 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17243.4808.1

>prot_L-elsbetiae_contig17243.4808.1 ID=prot_L-elsbetiae_contig17243.4808.1|Name=mRNA_L-elsbetiae_contig17243.4808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
MFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVC
AGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCT
TVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKW
QHADFLTKPLHQGALFLRRQFAMNL*
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mRNA from alignment at L-elsbetiae_contig17243:1059..3475+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17243.4808.1 ID=mRNA_L-elsbetiae_contig17243.4808.1|Name=mRNA_L-elsbetiae_contig17243.4808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2417bp|location=Sequence derived from alignment at L-elsbetiae_contig17243:1059..3475+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCCCCCTGTACTGGTCTCAACCTTCGCACGACCCTGAACCCCCCGA GACTCCGGCGCCGCGGAAGGAGTACCGAGTGACACCGGCGACGACGCGGT CCAAGACGAAAGCAGCGGAGGTCCTTCGGTCTGGGGTGGCGAACACTGGC CTCCCGGGGGCTTTTGCGCTTCTGGCGGCAGAGGAGGAGATGGTGCGCGC CATGGGTTCCACGCACGTCCCCGACCCTCTGCCGCCGAATATGCTTGTCA CCGACATGCCGACGCCGAAGACGGACGCCGAGGCGAGCTCTGGGCCGTAC AGGGAGCACTTTGCAATGGCGCGGGAGGGAGAGATGTCGGGGCACGACGC AGCGAGGACGTTCGTGGAGCTTCAGCCGGGAGAGTAGCAACCAGGGATGA ACATCATCGACGGCAGATGGGTATATTCGTGGAAGGGGGATTCCGATGGT TTTGTGTTGGGTCCGAAGGCGAGGTTATGTGCCCGTGGTTTTAAGCAACG TCATGGCATCGATTTCTTTGAGACTTTTTCCCCCTGCCCTAATGTTTCCA GTATTCGCCTGCTTGCTGCCATCGCTTGTTCCCTGGGTTTGTCGCTTTAT CACCTCGATGTTTCCCAAGCTTTTGTGCAGTCTGAACTGGATGAAGTCGT TTACGTGCGCATGCCCCGATTCTGCGGTGCTCTTTCGGGGAAGGTGATGC GACTTGGTCGCAGCCTGTACGGGTTGAAGCAAGCTTCGCGGACTTGGCAT AAGAAGTTGGTCCGTGTGATGAAGCTTCTTGGTTTTGAGCAATGCCTGGC CGACAACTGTGTCATGCGTCTGATCACGAACGGCAAGCTTGAGATGGCTG TTGTTGTCCACGTTGACGACATCCTGTCCGTCGGTGACCAGGCACGGTGT GAGCAATTGGTCGGGACTTGAACGAGCACTTTCCGGTGAAGTTTCTTGGA GACCTAGAGATGTATGCAGGAATCCGTTTTACTCGTGACCCGGTGTCGGG AAACCTTACGCTTTCTCAGAGGACTTTTGCGGAGAACCTTGTGAAGAAGT TTGGTGTGTCCCGTACCAAGGCTACCCCCATGGCTGTTGGTCTGATGCTT GCGGCGCTTGATGGTGATGAACTGATTGACGCTACCCCCTTCCGGTCGCT TATCGGCCACTTGATGTGGCTTGCCAACCAGACTAGGCCTGACATCCTTA ACGCTGTGCGCGCCCTTGCCCGCTACTGCAATGCCCCCACGATGCGGCAC TGGAAGGCCGCTTTGCATGTCTTGATGTATGTTCGGGGGACGGTCGATTT CGGGATTACATTTCAGCGGGGAGGGGACCTTGACTTGGTGTTGTATGTGG ACGCGGACTTTGCTAGCAAGGAGACGGGCAGGAAGTCAGTGTCTGGGGGG CTCTCAATGTGTGCGGGTGCATGTATGTGCTGGTTACTTTTCGAAGACCC AGCAGAGCGTCGCTACGGCGACTAGTGAGGCGGAGTACGGGGCGATCGCG CAGGGTGTGAAGGAGGAGATGATTTTCATGCGCTATGTCTGGAGTTTTGC GCTTCCGGACCGTGAGGTGGGATGCACAACCGTGTATGAGGACAACGAAG AGGCGATTTACTTGGCGATTAACCCCGCCCTCACGCCTAACAGCAAGCAC CTCGACATCCGCCACCACTTTTTCCGCAAACGTGTCGACCGCGGGGAGTT TAAGATTGTCCACGTACCAACCAAGTGGCAGCATGCTGACTTCCTCACGA AGCCGCTGCACCAGGGGGCACTCTTTCTGCGCAGGCAATTTGCGATGAAC CTGTGATTGCTTGCGCGTTTTGTGTTTGTGTTTTGTGTTTTGCGTTTTGC GCTTTGCGTTTTGCGGTACTGCGCACAAGGATCATGGTGGGGGGAGATGG ACTGATGGACCATGCTCCTTGTAGCAGTATAGCTTTCATGTTTCGCATTA TTTGTTTTGGTTTTGGTTTTGGCGTTGGCTTTGCTCTGATTGTGGACCTT TGGTGGAGGCAGGGGGGCCGACGTATGCTTTATATGTTTTGATATTTCGA TTGTTTCTTCGCGTCTTGTATCGGCTTCGCATATGGCCCAAAGGAGCAGG GGGGCCGTCCTGCATTTTGAATTTTCCGTTTTCTTGTGATTGGTACTCGA GTAATTGGAAGGATTTGGGAACCGGTTGCGTGCATATTTCGCTCGATCGA TTGACAGCAGTAGCGTAATTAATGGTGGAAGTCCCTCTGGCATTTTCTTG TGTTGGGTTTATGGACGTTCCCCTATTGTTGCTACTATGGATGTCTCTGG ATATTGTATCGGAGGAAGGATTTGATATACACCTATTGGTAATGGTTGGG GGCCTTTGTGCTTTCCGAATGCTGATTTGTGTTGACCAAGAAGTTGGAAT TTCGGTTGTGTTTGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig17243:1059..3475+

>mRNA_L-elsbetiae_contig17243.4808.1 ID=mRNA_L-elsbetiae_contig17243.4808.1|Name=mRNA_L-elsbetiae_contig17243.4808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1056bp|location=Sequence derived from alignment at L-elsbetiae_contig17243:1059..3475+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCGGGGGACGGTCGATTTCGGGATTACATTTCAGCGGGGAGGGGAC
CTTGACTTGGTGTTGTATGTGGACGCGGACTTTGCTAGCAAGGAGACGGG
CAGGAAGTCAGTGTCTGGGGGGCTCTCAATGTGTGCGGGTGCATGTATGT
GCTGGTTACTTTTCGAAGACCCAGCAGAGCGTCGCTACGGCGACTAGTGA
GGCGGAGTACGGGGCGATCGCGCAGGGTGTGAAGGAGGAGATGATTTTCA
TGCGCTATGTCTGGAGTTTTGCGCTTCCGGACCGTGAGGTGGGATGCACA
ACCGTGTATGAGGACAACGAAGAGGCGATTTACTTGGCGATTAACCCCGC
CCTCACGCCTAACAGCAAGCACCTCGACATCCGCCACCACTTTTTCCGCA
AACGTGTCGACCGCGGGGAGTTTAAGATTGTCCACGTACCAACCAAGTGG
CAGCATGCTGACTTCCTCACGAAGCCGCTGCACCAGGGGGCACTCTTTCT
GCGCAGGCAATTTGCGATGAACCTGTGAATGTTCGGGGGACGGTCGATTT
CGGGATTACATTTCAGCGGGGAGGGGACCTTGACTTGGTGTTGTATGTGG
ACGCGGACTTTGCTAGCAAGGAGACGGGCAGGAAGTCAGTGTCTGGGGGG
CTCTCAATGTGTGCGGGTGCATGTATGTGCTGGTTACTTTTCGAAGACCC
AGCAGAGCGTCGCTACGGCGACTAGTGAGGCGGAGTACGGGGCGATCGCG
CAGGGTGTGAAGGAGGAGATGATTTTCATGCGCTATGTCTGGAGTTTTGC
GCTTCCGGACCGTGAGGTGGGATGCACAACCGTGTATGAGGACAACGAAG
AGGCGATTTACTTGGCGATTAACCCCGCCCTCACGCCTAACAGCAAGCAC
CTCGACATCCGCCACCACTTTTTCCGCAAACGTGTCGACCGCGGGGAGTT
TAAGATTGTCCACGTACCAACCAAGTGGCAGCATGCTGACTTCCTCACGA
AGCCGCTGCACCAGGGGGCACTCTTTCTGCGCAGGCAATTTGCGATGAAC
CTGTGA
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