mRNA_L-elsbetiae_contig17243.4808.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE) HSP 1 Score: 390 bits (1002), Expect = 1.380e-113 Identity = 257/608 (42.27%), Postives = 334/608 (54.93%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 ++E+ TPA TRS+ K R G PG FALLA E+E+ R++ P +P P LV D+ TP+T EA +GP+ + A E G +A TF E Q G N+I +WVYSWKGD G+ + KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L H QAFVQSELDEVV++R+P CGA SGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q G + + R + L T Q++V VT +ET + L + P P LV L L + + R A P RL + M R +G + F ++ G H ++ + A + + + G+ + C Y +TQ+SV +++EAEY A++ G+KE IF+RY+W F P R+VGCT V+EDN AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV + Q ADFLTKPL + R F MN+ Sbjct: 1308 QREFVATPAVTRSRAK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE------QRGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDSCHFYAEQAFVQSELDEVVFIRLPPACGARSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 1875
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE) HSP 1 Score: 367 bits (943), Expect = 5.840e-112 Identity = 240/583 (41.17%), Postives = 310/583 (53.17%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLLVTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 ++E+ TPA TRS+ K R G PG FALLA E+E+ R++ P +P P LV D+ TP+T EA +GP+ + A E G +A TF E GD G+ + KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L L H D QAFVQSELDEVV++R+P CGALSGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q +E R M S L LR+ G C PR V+ +T+ + + G+T+ P+ + P + S G L W R + + + + + C Y +TQ+SV +++EAEY A++ G+KE IF+RY+W F P R+VGCT V+EDN AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV + Q DFLTKPL + R F +N+ Sbjct: 261 QREFVATPAVTRSRAK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-----------GVELNRYMPISNL------GELRWYAG-----------CHFPR------------DTVLGTVTISQQAVAEK----IVAKFGVTTDKE-TPMVVGLKLEQYDADEP-----------DVDEPFRSLVGYLMWLANQIRPDILNAATDRRSVSWALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRPDFLTKPLPKETFCANRDFVINI 755
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE) HSP 1 Score: 365 bits (937), Expect = 1.310e-110 Identity = 250/608 (41.12%), Postives = 325/608 (53.45%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 ++E+ TPA TRS+ K R G PG FALLA E+E+ R++ P +P P LV D+ TP+T EA +GP+ + A E G +A TF E GD G+ + KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L L H D QAFVQSELDEVV++R+P CGALSGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q G + + R + L T Q++V VT +ET + L + P P LV L L + + R A P RL + M R +G + F ++ G H ++ + A + + + G+ + C Y +TQ+SV +++EAEY A++ G+KE IF+RY+W F P R+VGCT V+EDN AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV + Q ADFLTKPL + R F MN+ Sbjct: 248 QREFVATPAVTRSRAK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 799
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE) HSP 1 Score: 356 bits (914), Expect = 8.040e-110 Identity = 249/608 (40.95%), Postives = 324/608 (53.29%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 ++E+ TPA RS+ K R G GL G FALLA E+E+ R++ P +P P LV D+ TP+T EA +GP+ + A E G +A TF E GD G+ + KARL ARGF QR G+DFFETFSP P+++SIRLLAAIAC L L H D QAFVQSELDEVV++R+P CGALSGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q G + + R + L T Q++V VT +ET + L + P P LV L L + + R A P RL + M R +G + F ++ G H ++ + A + + + G+ + C Y +TQ+SV +++EAEY A++ G+KE IF+RY+W F P R+VGCT V+EDN AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV + Q ADFLTKPL + R F MN+ Sbjct: 24 QREFVATPAVPRSRAK-----RDG---PGL-GTFALLATEDEINRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPYPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 575
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 335 bits (858), Expect = 1.300e-96 Identity = 238/619 (38.45%), Postives = 307/619 (49.60%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMG--STHVPDPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLLVT----RCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTG---------RPLCMS*CMFGGR---SISGLHFSGEGTLTWCCMWTRTL---LARRRAGSQCL------------------GGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 R+++ VTPA TRS G TG+PGAFALLAA+E+M R++ + + DP PN LV D+ TP+T +A +GP+ + A E++G AA TF + G+ IRLLAA+AC LGL L H D QAFVQSEL E VY+R+P+ CGALSGK++RL RSLYGLKQASRTWHK LVR MK LGFEQC AD CVMRLI G + M VVVHVDDI S+G ++RCEQ R + E V + R +RF R + T+ S ++ N + R T P +G+ A P P R G RP ++ R + +H+ + TR L R AG L G + C +FS+TQ+SV +++EAEY A+A G+KE IF+RY+WSF PD +VGCT + EDN A++LA NPA TPNSKH+D+RHHF R+RVDRGEFK+V+VP+ QHADFLTKPL + A + R F MNL Sbjct: 598 RQQHEVTPAVTRS----------GSRRTGMPGAFALLAADEQMTRSLSGPTADIDDPALPNGLVADLETPETYKQAHAGPHDVIWRAAERKEIAGLSAAGTFETMAAGD--------------------------------------------------------IRLLAALACELGLDLCHFDAEQAFVQSELVECVYLRLPQGCGALSGKIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFG---------------RDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLS-----------------QQTYATNMVAKFGVTRNKET----PMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEA-IFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 1113
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KG18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG18_9PHAE) HSP 1 Score: 314 bits (805), Expect = 6.920e-96 Identity = 200/447 (44.74%), Postives = 246/447 (55.03%), Query Frame = 1 Query: 475 LCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLL---VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHL-DIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 L ARGF QR GIDFFETFSPCP+V+SIRLLAA+AC LGL L H D QAFVQSEL E VY+R+P+ CGALSG ++RL RSLYGLKQASRTWHK LVR MK LGFEQC AD CVMRLI G + M VVVHVDDI S+G ++ CEQ F R E+++ VTR +ET P + L P L L + LT + + P+ +H+ + +T + G+ +GG ++SV +++EAEY A+A G+KE IF+RY+WSF PD +V CT V EDN A++LA NPA TPNSKH+ DIRHHF R+RVDRGEFK+V VP+ QHADFLTKPLH+ A + R F MNL Sbjct: 40 LVARGFGQREGIDFFETFSPCPSVTSIRLLAALACELGLDLCHFDTEQAFVQSELQECVYIRLPQGCGALSGNIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGIMAMVVVVHVDDIFSIGRKSWCEQ------------FGRLERTYAENMVAKFGVTRNKET------------------------PMAVGVKLEEFDACEPDVDEPFRSLVGHLMWLANQTRPDILTAVRAVARYSYAPK--------------------SVHWKAALHILMYIRFTSAFGITFQRGT--VGGVSL-------------EKSVMLSSTEAEYAAMADGMKEA-IFLRYLWSFIFPDGDVVCTVVKEDNVGALHLANNPATTPNSKHIIDIRHHFIRERVDRGEFKVVFVPSHLQHADFLTKPLHKEAFSVHRNFVMNL 414
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE) HSP 1 Score: 328 bits (840), Expect = 6.730e-95 Identity = 229/586 (39.08%), Postives = 300/586 (51.19%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTFR*SFLET*RCMQESVLL---VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 ++E+ TPA RS+ K R G PG FALLA E+E+ R++ P +P P LV D+ TP+T EA +GP+ + A E G +A TF E R G+DFFETFSPCP+++SIRLLAAIAC L L H D QAFVQSELDEVV++R+P CGALSGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q V E ++ VT +ET + L + P P LLV L L + + R A P RL + M R +G + F ++ G H ++ + A + + + G+ + C Y +TQ+SV +++EAEY A++ G+KE IF+R++W F P R+VGCT V+EDN A +LA A TPNSKH+DIRHHF R+RV RGEFK+VH + Q ADFLTKPL + R F MN+ Sbjct: 500 QREFVATPAVMRSREK-----RDGPG----PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE-------------------------------------------REGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQAVA------------------EKIVAKFGVTTDKETPMVVGLKLEQY---DADEPDVDEPFRLLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMFVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRHLWKFVFPGRDVGCTPVWEDNVGAFHLASKSASTPNSKHIDIRHHFIRERVARGEFKVVHARSDLQRADFLTKPLPKETFCAHRDFVMNI 991
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE) HSP 1 Score: 324 bits (831), Expect = 7.140e-93 Identity = 244/660 (36.97%), Postives = 316/660 (47.88%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNML--------------------------------VTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TST------------------FR*SFLET*RCMQESVLL-------VTRCRET-----LRFLRGLL---------------RRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 ++E+ TPA TRS PG FALLA E+E+ R++ P +P P L V D+ TP+ EA +GP+ + A E G +A TF E GD G+ + KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L L H QAFVQSELDEVV++R+P CGALSGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q G + FR + L T Q++V VT +ET L+ G L P LV L L + + R A P RL + M R +G + F ++ G H ++ + A + + + G+ + C Y +TQ+S +++EAEY A++ G+KE IF+RY+W F P R+VGCT V+EDN AI+LA NPA TPNSK +DIRHHF R+RV RG FK+VHV + Q ADFLTKPL + R F MN+ Sbjct: 504 QREFVATPAVTRSG----------------PGIFALLATEDEIKRSIAELPAPGVAEPALPTGLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDLETPEIYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEE----------------------GDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFHAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFFRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEHGTLDVAGESDSXXXXXXXXXXXXXXXXXXXVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAAL------HVLMYVRFTSGYGI-----TFQRGTVGGDHME---------LFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSGTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKQIDIRHHFIRERVARGGFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 1103
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE) HSP 1 Score: 311 bits (797), Expect = 7.970e-93 Identity = 216/534 (40.45%), Postives = 276/534 (51.69%), Query Frame = 1 Query: 277 AEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQLVGT*TSTF------------------R*SFLET*RCMQESVLL-------VTRCRETLRFLRGLLRRTL*RSLVCPVPRLPPWLLV*CLRRLMVMN*LTLPPSGRLSAT*CGLPTRLGLTSLTLCAPLPATAMPPRCGTGRPLCMS*CMFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 1803 A AS G + A E G +A TF E GD + + KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L L H D QAFVQS+LDEVV++R+P CGALSGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q G + + R + L T Q++V VT +ET +R L + P P LV L L + + R A P RL + L CG F ++ G H + + A + + + G+ + C Y +TQ+SV +++EAEY A++ G+ E IF+RY+W +VGCT V+EDN AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV + Q ADFLTKPL + R F MN+ Sbjct: 76 AMASDGXXXXIWTNAERKEFFGLNAVGTFEE----------------------GDEFVYAVSAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSDLDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQF-GVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFDVTTEKETPMVVRLKLEQY---DADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHV--LMYVRFTSGCGI---------TFQRGTVGGDHME---------LLVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMTEA-IFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 562
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE) HSP 1 Score: 284 bits (726), Expect = 2.640e-77 Identity = 152/284 (53.52%), Postives = 190/284 (66.90%), Query Frame = 1 Query: 64 RKEYRVTPATTRSKTKAAEVLRSGVANTGLPGAFALLAAEEEMVRAMGSTHVP---DPLPPNMLVTDMPTPKTDAEASSGPYREHFAMAREGEMSGHDAARTFVELQPGE*QPGMNIIDGRWVYSWKGDSDGFVLGPKARLCARGFKQRHGIDFFETFSPCPNVSSIRLLAAIACSLGLSLYHLDVSQAFVQSELDEVVYVRMPRFCGALSGKVMRLGRSLYGLKQASRTWHKKLVRVMKLLGFEQCLADNCVMRLITNGKLEMAVVVHVDDILSVGDQARCEQ 906 ++E+ TPA TRS+ + R G PG F+LLA E+E+ R++ P +P P LV D+ TP+T EA +GP+ + A E G +A TF E G N+I +WVYSWKGD G+ + KARL ARGF QR G+DFFETFSPCP+++SIRLLAAIAC L L D QAFVQSELDE+V++R+P CGALSGKV+RL RSLYGLKQASRTWH L+R MK LGFE C AD CVMRLI +G + M VV+HVDDI S+G ++RC+Q Sbjct: 1190 QREFVATPAVTRSRAR-----RDGPG----PGIFSLLATEDEIKRSIAELPAPGVAEPALPTGLVCDLETPETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEER-------GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCPFDAQQAFVQSELDEIVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQ 1457 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17243.4808.1 >prot_L-elsbetiae_contig17243.4808.1 ID=prot_L-elsbetiae_contig17243.4808.1|Name=mRNA_L-elsbetiae_contig17243.4808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp MFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVCback to top mRNA from alignment at L-elsbetiae_contig17243:1059..3475+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17243.4808.1 ID=mRNA_L-elsbetiae_contig17243.4808.1|Name=mRNA_L-elsbetiae_contig17243.4808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2417bp|location=Sequence derived from alignment at L-elsbetiae_contig17243:1059..3475+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17243:1059..3475+ >mRNA_L-elsbetiae_contig17243.4808.1 ID=mRNA_L-elsbetiae_contig17243.4808.1|Name=mRNA_L-elsbetiae_contig17243.4808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1056bp|location=Sequence derived from alignment at L-elsbetiae_contig17243:1059..3475+ (Laminarionema elsbetiae ELsaHSoW15)back to top |