mRNA_L-elsbetiae_contig17241.4807.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: D8LH84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH84_ECTSI) HSP 1 Score: 139 bits (350), Expect = 2.040e-39 Identity = 77/106 (72.64%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALRTEAESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSYAVS 318 LGSKSFTRKMI+ EE G V ++ + + + EA+IGDRTADPA+LVLQLGLAKAEALLPAL+ EA+ G L+T+ LLTGDQVVVHDG+ILEKPAD DEVR NI SYA S Sbjct: 16 LGSKSFTRKMII-EEMGFVPIVRS-ADINEAAIGDRTADPADLVLQLGLAKAEALLPALKAEADRGELSTSWLLTGDQVVVHDGRILEKPADEDEVRRNIASYARS 119
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A836CPK2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPK2_9STRA) HSP 1 Score: 102 bits (254), Expect = 5.370e-25 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALR-TEAESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSYAVS 318 LGSKS TRK+I+ EE G ++ T + + E +IGDR +DPA LVL++G AKA+ALLP+L A GA LLLTGDQVVVHDG++LEKP D EVR NI +YA+S Sbjct: 11 LGSKSATRKLII-EEMGWEAIIRT-ADIDEKAIGDRASDPAQLVLEIGTAKADALLPSLADAAARHGA---RLLLTGDQVVVHDGRVLEKPHDYAEVRRNIAAYALS 112
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A6V1TL15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TL15_HETAK) HSP 1 Score: 81.3 bits (199), Expect = 1.830e-16 Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTAD----PANLVLQLGLAKAEALLPALRTEAESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSYA 312 LGSKSFTR+MIV +E G ++ + + E +IGDR+AD P LVL LG AKA+A+L + + G LLLTGDQVVVH+G+ILEKP +E R I+ YA Sbjct: 47 LGSKSFTRQMIV-KEMGMEPIIRV-ADIDEKAIGDRSADTGWDPERLVLALGNAKADAILESGLQPGDHG-----LLLTGDQVVVHEGRILEKPTSLEEARQFIEGYA 147
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A7S1UJX9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJX9_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.930e-14 Identity = 52/104 (50.00%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALRTEAESGALNT-TLLLTGDQVVVHDGQILEKPADRDEVRANIKSY 309 LGSKS TR+ IV + V + + E +IGDR D LVL++G AKA ALLP L AE+G T+LLTGDQVVV +LEKP D DE R IK Y Sbjct: 79 LGSKSETRQAIVADMGFDFRVET--ADIDEKAIGDRAGDVRELVLEIGKAKAAALLPRL---AEAGGEPAGTVLLTGDQVVVQGDSVLEKPRDLDEARRFIKRY 177
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A7R9WE49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE49_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.580e-13 Identity = 48/116 (41.38%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALRTE-AESGALNTT---------LLLTGDQVVVHDGQILEKPADRDEVRANIKSYAVS 318 LGS SFTRK I+++E G V + R + E +GDR DP+ LVL L AK + L+ L + E G L ++LT DQVV HDG +LEKP +E R+ + YA S Sbjct: 48 LGSGSFTRK-IILKEMGIVYDIVVRP-IDEKGVGDRDGDPSELVLTLAKAKCDHLVSVLHNDDGEEGILPQKACEGDHGGWVVLTADQVVTHDGSVLEKPESIEEARSFVAGYATS 161
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A7S0PSJ5_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0PSJ5_MICPS) HSP 1 Score: 71.2 bits (173), Expect = 1.500e-12 Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALRTE------AESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSYAVS 318 LGSKSFTR+ I+ E V + + E +IGDRT P +LV+ + +AKA+A++ + E + +L+T DQVVVHDG + EKP +DE R I+ Y VS Sbjct: 53 LGSKSFTRQAILKEMGIPYEV--AVADIDEKAIGDRTDSPKDLVMAIAVAKADAIVRKMGAELGPDMDGQWPIAEDAMLVTCDQVVVHDGVVREKPESKDEAREFIRGYGVS 162
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A0G4GMM6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GMM6_9ALVE) HSP 1 Score: 70.9 bits (172), Expect = 1.790e-12 Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDR-TADPANLVLQLGLAKAEALLPALRTEAESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSYA 312 LGS S TRKMI+ E + + L E +IGDR P +V LG AKA+ ++ L+ E E+ TLL+TGDQVVV +G+ILEKP +E R+ ++ Y+ Sbjct: 25 LGSSSATRKMIIAEMG--LRYRTEIADLDERAIGDRENQSPEEIVTLLGKAKADVIMSQLKPEEEAEG---TLLITGDQVVVCEGKILEKPGSAEEARSFLQKYS 124
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A2V3ID47_9FLOR (Maf-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID47_9FLOR) HSP 1 Score: 69.7 bits (169), Expect = 2.400e-12 Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALRTEAESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSYA 312 LGSKS++R+ ++ E L + + E SI D DP LV Q+ LAKA ALLP + A T+L+TGD VV H GQILEKPA E R + SYA Sbjct: 14 LGSKSWSRRTLLKELGLPTLEIEIPD-IDERSIRDE--DPRILVQQIALAKARALLPRISPTASG----KTILITGDSVVTHKGQILEKPAHEQEARQFLASYA 110
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A7J7ICZ2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICZ2_9RHOD) HSP 1 Score: 65.1 bits (157), Expect = 2.200e-11 Identity = 48/107 (44.86%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPAL----RTEAESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSY 309 LGS S TR+ ++ E +VM R + E +I R D LV LG AKA+ALL L R + + LL+TGDQVVVH+G+ILEKP D E R I SY Sbjct: 12 LGSSSRTRQQLLKELGYEFVVM--RPDIDEEAI--RHPDAERLVRLLGHAKADALLAHLGDRSRLDEQRAEGKPLLLITGDQVVVHEGRILEKPQDATEARRFISSY 114
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Match: A0A833QPI2_9POAL (Maf-like protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QPI2_9POAL) HSP 1 Score: 67.0 bits (162), Expect = 2.270e-11 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 1 LGSKSFTRKMIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALRTEA-ESGALNTTLLLTGDQVVVHDGQILEKPADRDEVRANIKSYA 312 LGS S +RK I+ + VM + + E I R P +LV+ L AKA+A++ L+ E G TLL+T DQVV+H G+I EKP+D DE R IK Y+ Sbjct: 8 LGSSSASRKQILSKMGYQFTVMG--ADIDEKQI--RREKPEDLVMALAEAKADAIIAKLKESGFEEGTSEPTLLITADQVVLHGGEIKEKPSDADEARQFIKGYS 108 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17241.4807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17241.4807.1 >prot_L-elsbetiae_contig17241.4807.1 ID=prot_L-elsbetiae_contig17241.4807.1|Name=mRNA_L-elsbetiae_contig17241.4807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp MIVVEENGAVLVMNTRSGLQEASIGDRTADPANLVLQLGLAKAEALLPALback to top mRNA from alignment at L-elsbetiae_contig17241:2169..3438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17241.4807.1 ID=mRNA_L-elsbetiae_contig17241.4807.1|Name=mRNA_L-elsbetiae_contig17241.4807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1270bp|location=Sequence derived from alignment at L-elsbetiae_contig17241:2169..3438+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17241:2169..3438+ >mRNA_L-elsbetiae_contig17241.4807.1 ID=mRNA_L-elsbetiae_contig17241.4807.1|Name=mRNA_L-elsbetiae_contig17241.4807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=582bp|location=Sequence derived from alignment at L-elsbetiae_contig17241:2169..3438+ (Laminarionema elsbetiae ELsaHSoW15)back to top |