mRNA_L-elsbetiae_contig1722.4795.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1722.4795.1
Unique NamemRNA_L-elsbetiae_contig1722.4795.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: D7FPQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ5_ECTSI)

HSP 1 Score: 825 bits (2131), Expect = 5.230e-295
Identity = 413/469 (88.06%), Postives = 435/469 (92.75%), Query Frame = 3
Query:   42 MVALTGFAMNFLSLSTPRVASRQAPRWARRWATPCLRMSSDQ-KGAAPVTPDFVTPVEVASINLSKPTKNPERPSKWAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQEQDIKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNARASDKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            MVA+  FAMN LSLSTPR ASRQA RW RRWA P +RMSSDQ +G AP+TPDFVTPVEVA I LSKP K P R  KW GL+GLDERTAGSLIPETLQGME+D EF+LTAAKLK+MGQKKLTLEEKKIRRRALKDRNLPSF+Q +QEQ IKINRE STIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELN+HFRYMVE+GRALGLDVIDRCNLTVLQEPGQEDLAEFLAK+KVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLM LNALGYGQ +S LKLDLVYNP+GGFLPPEQ ALE KYKEEL+EAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFN  ACSGLMCKDTINVGWDG +FDCDFNQQL LGMGTAGTNA AS+KL +V+EGYS+FDVDSVDDMQTT+IVLESHCYGCTAGNGSSCQG TA
Sbjct:    1 MVAIA-FAMNLLSLSTPRSASRQAYRWGRRWAAPQVRMSSDQTQGPAPITPDFVTPVEVAGIRLSKPAKAPARSKKWVGLEGLDERTAGSLIPETLQGMEKDEEFQLTAAKLKQMGQKKLTLEEKKIRRRALKDRNLPSFQQHVQEQGIKINRESSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNDHFRYMVEEGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKNKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMMLNALGYGQPNSGLKLDLVYNPIGGFLPPEQVALEVKYKEELNEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNTAACSGLMCKDTINVGWDGRVFDCDFNQQLGLGMGTAGTNAGASEKLLAVKEGYSIFDVDSVDDMQTTDIVLESHCYGCTAGNGSSCQGATA 468          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: A0A836C7A2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A2_9STRA)

HSP 1 Score: 600 bits (1547), Expect = 5.860e-207
Identity = 299/427 (70.02%), Postives = 349/427 (81.73%), Query Frame = 3
Query:  180 PVTPDFVTPVEVASINLSKPTKNPERPS----KWAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQEQDIKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNARASDKLRSVQE-GYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            PVTPDF TPVEV  + LS P   P R +    KWAGL GLDERT GSL+P+TL+ M ED EF+ TAA+L+ +G  ++TLEEKK+RRRAL +  LPSF+Q +    + + R  STI QLNIGL+CNQAC+HCHVESSP+R E +S+EVAERC+ +++ S  V TLDITGGAPELN  FRY+VEQ  ALG+++IDRCNLTVLQEPGQEDLAEFLAKHKV VVASLPCYSPKNVN QRGSGVFDRSI GL +LNALGYG   S L LDLVYNP+G FLPP Q ALE KYKEEL EAFGI FN+LFTITNMPIKRFADFLYRRGEL++YMELLVRNFN  A  GLMCKDT++VGWDG IFDCDFNQQL LGMGTAGTN  A   L+++ + GYS+FDVDS+D++ +T+IVLESHC+GCT+G GSSCQG T+
Sbjct:   11 PVTPDFNTPVEVDKLRLSTPKAPPARAAEPAAKWAGLDGLDERTTGSLVPDTLKQMGEDEEFQATAARLRALGAARMTLEEKKLRRRALDELGLPSFQQYLARAGLAVPRATSTILQLNIGLYCNQACAHCHVESSPRRTESMSREVAERCLVVLRASGGVATLDITGGAPELNPQFRYLVEQASALGVEIIDRCNLTVLQEPGQEDLAEFLAKHKVRVVASLPCYSPKNVNTQRGSGVFDRSILGLRQLNALGYGVEGSGLSLDLVYNPLGAFLPPPQEALEAKYKEELMEAFGITFNSLFTITNMPIKRFADFLYRRGELKDYMELLVRNFNPAATKGLMCKDTVSVGWDGRIFDCDFNQQLGLGMGTAGTNEDAPFDLKTMGDVGYSIFDVDSLDELASTKIVLESHCFGCTSGMGSSCQGATS 437          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: A0A7S4NJP5_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NJP5_9EUKA)

HSP 1 Score: 513 bits (1320), Expect = 1.830e-172
Identity = 260/442 (58.82%), Postives = 324/442 (73.30%), Query Frame = 3
Query:  138 TPCLRMSSDQKGAAPVTPDFVTPVEVASINLSKPTKNPERPSKWAGLKGLDER-----TAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQEQDIKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRAL-GLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNARASDKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            T  L +S ++K   P+TPDF TPV V  I L +P         W   + LD++      A SLIPETL+ ME D EF  TA +L+++G K ++LEE+K RRRAL    +P F + ++++ +++ R+  +I QLNIGL+CNQAC+HCHVESSP R E++S+E+A+ C+ +++ S TVKTLD+TGGAPEL+  FR++VE+     G+++IDRCNLTVL+EP QEDL EFLA H V VVASLPCYS KNVNMQRG GVF RSI GL KLN +GYGQ +SDLKLDLVYNP+G FLPP Q  LE KYKEEL E FGIKFNNL TITNMPIKRFADFLYRRGEL+EYMELLVRNFN     GLMC+DTI+VGWDG I+DCDFNQQL +  GT G     S    S ++  SV D+ S+D+M    I+ ++HC+GCTAG GSSCQG TA
Sbjct:   23 TSSLLLSENKK---PLTPDFTTPVNVGDIRLKRPD--------WEKKERLDQKREEREAATSLIPETLEKMETDEEFIATAEQLRKIGAKAMSLEERKKRRRALDALQIPQFHEFLEKKKLEVTRKSPSILQLNIGLYCNQACNHCHVESSPTRTELMSEEIADHCLRLLRESKTVKTLDLTGGAPELSPVFRHLVEEASTYDGVEIIDRCNLTVLEEPEQEDLHEFLADHNVRVVASLPCYSSKNVNMQRGKGVFGRSISGLQKLNEVGYGQPESDLKLDLVYNPLGAFLPPPQGPLEEKYKEELMEHFGIKFNNLLTITNMPIKRFADFLYRRGELEEYMELLVRNFNPSTTEGLMCRDTISVGWDGKIYDCDFNQQLSMDAGTLGKEKNISPSCPSAKK-LSVLDLKSLDEMVDYHILFDAHCFGCTAGAGSSCQGATA 452          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: UPI0018D6A746 (uncharacterized protein LOC119721737 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6A746)

HSP 1 Score: 510 bits (1313), Expect = 9.510e-171
Identity = 249/428 (58.18%), Postives = 323/428 (75.47%), Query Frame = 3
Query:  189 PDFVTPVEVASINLSKPTKNPERPSKWAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQ-------EQDIK--INREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNARASDKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            PD+ T V V    L +P K P    KW GL  L  RT GSLIPETL+ ME++ +F++TAA L++MGQ KLT EE+K R+RAL +  +P F + I        ++++K  + + +  I QLNIGL+CNQAC+HCHVESSP+R EM+++E AERC+EI+++SP+V TLD+TGGAPEL++ FR++   GR LG +VIDRCNLT L EPGQED AEFLA++K+ V+ASLPCYS KNVN QRGSGVFD+SI+ L+ LN LGYG+ D  L+LDLVYNP+GGFLPP QA LE KYKEEL + FGI+FNNL+TITNMPIKRFADFLYRR EL++YM+LLVRNFN  +  GLMC++ +NV WDG +FDCDFNQQL++GM    +    ++ +       SV+D++S DD+    IV ++HC+GCT+G GSSCQG TA
Sbjct:   69 PDYNTSVNVHEHRLKRPEKPPPSRRKWEGLDELKARTKGSLIPETLKEMEQNEDFQITAANLRKMGQAKLTREERKKRQRALDNLGIPDFWEFITKWSKQPGQENLKKQLKKIEIEILQLNIGLYCNQACNHCHVESSPKRTEMMNRETAERCLEILRSSPSVHTLDLTGGAPELSKEFRFLARGGRDLGREVIDRCNLTALLEPGQEDTAEFLAENKIIVIASLPCYSAKNVNTQRGSGVFDKSIQALLLLNQLGYGRQDGGLRLDLVYNPLGGFLPPSQAELEAKYKEELWDTFGIEFNNLYTITNMPIKRFADFLYRRNELEDYMQLLVRNFNPASVEGLMCRNHLNVNWDGRLFDCDFNQQLDMGMSRVNSTMDPANDISKPSTAPSVWDIESTDDLIDLRIVTDNHCFGCTSGMGSSCQGVTA 496          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: A0A8B7Y591_ACAPL (uncharacterized protein LOC110978040 isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y591_ACAPL)

HSP 1 Score: 509 bits (1311), Expect = 1.550e-170
Identity = 252/429 (58.74%), Postives = 322/429 (75.06%), Query Frame = 3
Query:  189 PDFVTPVEVASINLSKPTKNPERPSKWAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLI--------QEQDIK-INREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNARAS-DKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            PD+ T V V    L +P K P    KW GL  L +RT GSLIPETL+ ME++ +F++TAA L++MGQ KLT EE+K R+RAL +  +P+FR+ I         EQ +K + + +  + QLNIGL+CNQAC+HCHVESSP+R E ++++ AERC+EI+KNSPTV TLD+TGGAPEL   F+++   GR LG +VIDRCNLT L EPGQED AEFLAK+K+ V+ASLPCYS KNVN QRGSGVFD+SI+ L+ LN LGYG+ D  L+LDLVYNP+GGFLPP Q+ LE KYKEEL + FGI+FN+L+TITNMPIKRFADFLYRR EL++YM+LLVRNFN  +  GLMC++ +NV WDG +FDCDFNQQL++GM    +   A+ D         SV+D++S DD+    IV ++HC+GCT+G GSSCQG TA
Sbjct:   62 PDYNTSVNVHEHRLKRPEKPPPLRKKWVGLDELKQRTKGSLIPETLKEMEQNEDFQITAANLRKMGQAKLTREERKKRQRALDNLGVPNFREFITKWSKQPGHEQLMKQLKKVEIGVLQLNIGLYCNQACNHCHVESSPKRTETMTRQTAERCLEILKNSPTVHTLDLTGGAPELAGEFKFLARGGRDLGREVIDRCNLTALLEPGQEDTAEFLAKNKITVIASLPCYSAKNVNTQRGSGVFDKSIQALLLLNQLGYGKPDRGLRLDLVYNPLGGFLPPSQSELEAKYKEELWDTFGIEFNSLYTITNMPIKRFADFLYRRNELEDYMQLLVRNFNPASVEGLMCRNHLNVNWDGRLFDCDFNQQLDMGMRRVNSKMEAAHDMSERSSSAPSVWDIESTDDLVGLRIVTDNHCFGCTSGMGSSCQGTTA 490          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: A0A7S2WVW2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVW2_9STRA)

HSP 1 Score: 506 bits (1303), Expect = 2.670e-170
Identity = 266/446 (59.64%), Postives = 320/446 (71.75%), Query Frame = 3
Query:  117 RWARRWATPCLRMSSDQKGAAPVTPDFVTPVEVASINLSKPTKNPERPSKWAGLKGLDERTAGSLIPETLQGMEEDV-EFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQEQDIKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQL--ELGMGTAGTNARASDKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            R A RW  P LR  +         PD+ T V+V  I LSKP    +RP  W GL+GL +R   SLIP+TL  MEED  E  +TA  L   G++KL+LEE+K RRR L D  +P FR  I +Q++ I R+ + I QLNIGL+CNQAC+HCHVESSP+RKEM+ ++ AERCIE++K S TVKTLDITGGAPE+N  FR +VE   A G++VIDRCNLTVL EP Q DL +FLA H+V VVASLPCYS KNVNMQRG+ VF+RSI+GL++LN  GYG+  S L LDLVYNP+G FLPP Q ALE KYKEEL +AFGI+FN LFTITNMPIKRFADFLYRRGEL++YMELLVRNFN      +MC  T++VGWDG I+DCDFNQQL  EL + TA T                VF +DS+DDM    + L+SHC+GCTAG GSSCQG+ A
Sbjct:    3 RIALRW--PALRRLTS-------LPDYNTRVDVDKIKLSKP----KRPGSWVGLEGLSDRNKDSLIPDTLAKMEEDEREGVVTATSLMAAGRQKLSLEERKARRRLLSDLGVPGFRDFITQQNLAIQRKPAEILQLNIGLYCNQACNHCHVESSPKRKEMMDEKTAERCIELLKTSSTVKTLDITGGAPEMNSQFRRLVEAATAEGVEVIDRCNLTVLLEPDQADLVDFLADHRVRVVASLPCYSAKNVNMQRGNKVFERSIEGLLRLNDRGYGKEGSGLFLDLVYNPIGAFLPPPQEALEAKYKEELMDAFGIEFNGLFTITNMPIKRFADFLYRRGELKDYMELLVRNFNPSTVDSVMCTSTVSVGWDGKIYDCDFNQQLAMELSVPTATTEPTPV---------CDVFAIDSLDDMSQIPVRLDSHCFGCTAGMGSSCQGEVA 426          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: A0A7S3K3W5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3W5_9STRA)

HSP 1 Score: 501 bits (1289), Expect = 1.050e-167
Identity = 254/427 (59.48%), Postives = 316/427 (74.00%), Query Frame = 3
Query:  189 PDFVTPVEVASINLSKPTKNPE-----RPSKWAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQE---QDIKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALG--LDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNAR----ASDKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSS 1427
            PD  TPVEVA I L KPTK P      +   W+GL GL++RT+GSLI ETL+ ME D EF+LTA +L+E G  +++LEEKK RRRAL    +P F   I+    QD++I RE S I Q+N+GL+CNQAC+HCHVESSP+R EM++ +VA+RCIEI+  SP++ TLDITGGAPELN  FR++V   R+L   L++IDRCNLTVL EPGQEDLAEFLA+H V +VASLPCYS KNV+MQRG GVF+RS+ GL KLN LG+G   S L LDLVYNP+G FLPP Q ALE KYKEEL + FG+ FN LFT+TNMPIKRFADFL+RRGELQ+YM LLVRNFN      +MCKDT++V +DG +FDCDFNQQL++ +  A +N        D+    Q+G S+FD+ S  D+    I  ++HC+GCTAG GSS
Sbjct:   33 PDMNTPVEVAEIRLQKPTKRPRYYQRTKEGTWSGLDGLEQRTSGSLIEETLKEMETDTEFQLTAKRLREQGAARMSLEEKKQRRRALDALGVPDFSTFIKAHNIQDVEIRRETS-ILQINVGLYCNQACNHCHVESSPKRTEMMNNQVADRCIEILDKSPSLHTLDITGGAPELNPSFRHLVLGARSLNKKLEIIDRCNLTVLSEPGQEDLAEFLAEHNVRIVASLPCYSAKNVDMQRGKGVFERSVAGLRKLNDLGFGVQGSGLYLDLVYNPLGAFLPPHQDALEAKYKEELQQHFGVTFNQLFTMTNMPIKRFADFLFRRGELQDYMSLLVRNFNMSTTDNIMCKDTLSVNYDGSLFDCDFNQQLQIPIKDATSNLEMVKDGKDEKILHQKGISIFDIQSTSDLLNMSITHDNHCFGCTAGMGSS 458          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: L1IC20_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IC20_GUITC)

HSP 1 Score: 494 bits (1273), Expect = 2.170e-165
Identity = 253/439 (57.63%), Postives = 323/439 (73.58%), Query Frame = 3
Query:  135 ATPCLRMSSDQKGAAPVTPDFVTPVEVAS--INLSKPTKNPERPSKWAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQEQDIKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNARASDKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            +TP    S        VTPDF T V V    I L K      R  K   ++G   RT+ SLIP++++ +EED + K TA  LKE+GQ++LT+EE+K RRRAL +  +PSF + + ++++ + + +  I QLNIGL+CNQAC+HCHVESSP+RKEM+SKEVA+RCIE++  SP++KT+D+TGGAPELN+ FR++V +  A   ++IDRCNLTVL EPGQEDL +FL KHKV V+ASLPCYS KNV+ QRGSGVF++SI GLMKLN  GYG   S L LDL+YNP+GGFLPPEQ ALE KYK EL   FGI FN+LFT++NMPIKRFADFLYRRGELQEYM+LLVRNFN     GLMC + ++VG+DG ++DCDFNQQL LGM          +KL S     +VFDV S+++++   +V +SHC+GCTAGNGSSCQG TA
Sbjct:   34 STPLSARSPSLSRMFNVTPDFNTDVNVHQHRIELRK-----VREKKIEEIRG---RTSASLIPDSMRHVEEDEDHKTTARNLKELGQQRLTMEERKNRRRALDNLGVPSFDKFLADRNVSLKKSEVEILQLNIGLYCNQACNHCHVESSPKRKEMMSKEVAKRCIELLDKSPSIKTIDLTGGAPELNDQFRFLVSEASARNKEIIDRCNLTVLTEPGQEDLVDFLVKHKVRVIASLPCYSLKNVDTQRGSGVFEKSIHGLMKLNQAGYGAEGSGLVLDLIYNPLGGFLPPEQKALEEKYKTELSTHFGIVFNSLFTLSNMPIKRFADFLYRRGELQEYMDLLVRNFNLATVDGLMCTNLVSVGYDGKMYDCDFNQQLALGMKV--------NKLSSP----TVFDVQSLEELRGLAVVADSHCFGCTAGNGSSCQGATA 452          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: A0A6V1UUT3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UUT3_HETAK)

HSP 1 Score: 492 bits (1267), Expect = 2.820e-164
Identity = 253/417 (60.67%), Postives = 310/417 (74.34%), Query Frame = 3
Query:  201 TPVEVASINLSKPTKNPERPSKWAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQEQD--IKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTAGTNARASDKLRSVQEGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSSCQGQTA 1445
            TPV VA I L KP +  + P     ++GL+ERT GSLIPETL+ ME D EF+LTA  L+E GQ ++T EE   RRRAL    +PSF + +  Q   + + R    + QLN+GL CNQAC+HCHVESSP+R E +S+EVA+R + +++ SP++ TLD+TGGAPEL+  FR +V+     G++VIDRCNLTVL EPGQEDLAEFLA +KV VVASLPCYS KNVN+QRGSGVFDRS+ GL KLN LGYG+  + L LDLVYNP+G FLPP QAALE KY+EEL E FGI+FN LFTI+NMPIKRFADFL+RRGEL+EYM LLVR FN  A  GLMC++ ++V WDG +FDCDFNQQL +GMG+      A D  R    G S+FDV+SVD +    +VL SHC+GCTAG GSSCQG TA
Sbjct:   55 TPVNVADIKLPKPKRKAKVPDF---VQGLEERTKGSLIPETLKAMETDEEFQLTAKALREKGQARMTKEEAVRRRRALDRLGVPSFHEFLAAQSPPLAVPRAAPAVLQLNVGLHCNQACAHCHVESSPKRTEAMSQEVADRALALLRASPSLTTLDLTGGAPELHAVFRPLVKAATEAGVEVIDRCNLTVLTEPGQEDLAEFLAANKVRVVASLPCYSAKNVNLQRGSGVFDRSVAGLRKLNELGYGREGTGLHLDLVYNPLGAFLPPPQAALEEKYREELMEHFGIEFNGLFTISNMPIKRFADFLHRRGELEEYMGLLVRTFNPAAVQGLMCRNHLSVRWDGALFDCDFNQQLGMGMGSQDDGPYAPD--REDFSGISIFDVESVDQLMRHPVVLASHCFGCTAGMGSSCQGTTA 466          
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Match: C3XRT0_BRAFL (DUF3641 domain-containing protein n=2 Tax=Branchiostoma TaxID=7737 RepID=C3XRT0_BRAFL)

HSP 1 Score: 491 bits (1263), Expect = 1.380e-163
Identity = 248/449 (55.23%), Postives = 328/449 (73.05%), Query Frame = 3
Query:  147 LRMSSDQKGAAPVTPDFVTPVEVASINLSKPTKNPERPSK-WAGLKGLDERTAGSLIPETLQGMEEDVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLI------------QEQDIKINREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNSPTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDLAEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQADSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMPIKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDCDFNQQLELGMGTA--GTNAR--ASDKLRSVQ-----EGYSVFDVDSVDDMQTTEIVLESHCYGCTAGNGSS 1427
             R SS QK    + PDF T V+V +  L +P + P  P++ W GL+GL ERT GSLIP+TLQ ME+D +FK+TA  L+++GQ KLT EE+K R+RAL+   +P+FR+ +            +++   + ++   I QLNIGL+CNQAC+HCHVESSP+R EM+S+EVA++C+EI+  SP++ TLDITGGAPELN  FRY+   G ALG  V+DRCNLTVL EPGQEDL +FL +H+V VVASLPCYS KNVNMQRG GVFD+SI+ L+ LN  GYG+  + L+LDLVYNP+GGFLPP Q  LE KY++EL + FGI+FN L+T+TNMPIKRFADFLYRR ELQ+YM LLVRNFN  +  GLMC++ ++V WDG ++DCDFNQQL+L +     G +A+  A ++  +V      +G SV+D+ S DD+  + +  ++HCYGCTAG GSS
Sbjct:   25 FRSSSSQKQPVDL-PDFNTDVDVHTHRLKRPERPPPSPARRWVGLEGLRERTEGSLIPDTLQEMEKDEQFKITAENLRKLGQVKLTREERKKRQRALRKLGIPNFREFLLKNLKENPQEGLEDKHQSLKKQPIEILQLNIGLYCNQACNHCHVESSPKRTEMMSREVADKCLEILATSPSIHTLDITGGAPELNPQFRYLAAGGSALGKKVLDRCNLTVLLEPGQEDLPDFLTQHRVSVVASLPCYSAKNVNMQRGKGVFDKSIQALLLLNERGYGKPGTGLELDLVYNPLGGFLPPPQRELEDKYRQELWDTFGIEFNKLYTVTNMPIKRFADFLYRRNELQDYMNLLVRNFNPMSVKGLMCRNLLSVNWDGRVYDCDFNQQLDLAIPRTRLGLSAKQPAKEEPPTVHPDLKFKGLSVWDIASTDDLLGSRVATDNHCYGCTAGMGSS 472          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1722.4795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPQ5_ECTSI5.230e-29588.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7A2_9STRA5.860e-20770.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4NJP5_9EUKA1.830e-17258.82Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
UPI0018D6A7469.510e-17158.18uncharacterized protein LOC119721737 n=1 Tax=Patir... [more]
A0A8B7Y591_ACAPL1.550e-17058.74uncharacterized protein LOC110978040 isoform X1 n=... [more]
A0A7S2WVW2_9STRA2.670e-17059.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K3W5_9STRA1.050e-16759.48Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
L1IC20_GUITC2.170e-16557.63Uncharacterized protein n=2 Tax=Geminigeraceae Tax... [more]
A0A6V1UUT3_HETAK2.820e-16460.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
C3XRT0_BRAFL1.380e-16355.23DUF3641 domain-containing protein n=2 Tax=Branchio... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1722contigL-elsbetiae_contig1722:13855..22878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score824.7
Seed ortholog evalue2.2e-236
Seed eggNOG ortholog2880.D7FPQ5
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Protein of unknown function (DUF3641)
EggNOG OGs2QWFM@2759,COG0535@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRadical SAM
Ec32 orthologEc-20_000950.1
Exons13
Model size2348
Cds size1407
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815717.9084473-UTR-L-elsbetiae_contig1722:13854..147541622815717.9084473-UTR-L-elsbetiae_contig1722:13854..14754Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1722 13855..14754 -
1691683057.2138453-UTR-L-elsbetiae_contig1722:13854..147541691683057.2138453-UTR-L-elsbetiae_contig1722:13854..14754Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1722 13855..14754 -
1622815718.105134-UTR-L-elsbetiae_contig1722:22837..228781622815718.105134-UTR-L-elsbetiae_contig1722:22837..22878Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1722 22838..22878 -
1691683057.3558173-UTR-L-elsbetiae_contig1722:22837..228781691683057.3558173-UTR-L-elsbetiae_contig1722:22837..22878Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1722 22838..22878 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815717.922456-CDS-L-elsbetiae_contig1722:14754..148801622815717.922456-CDS-L-elsbetiae_contig1722:14754..14880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 14755..14880 -
1691683057.2249677-CDS-L-elsbetiae_contig1722:14754..148801691683057.2249677-CDS-L-elsbetiae_contig1722:14754..14880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 14755..14880 -
1622815717.937897-CDS-L-elsbetiae_contig1722:15233..153571622815717.937897-CDS-L-elsbetiae_contig1722:15233..15357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 15234..15357 -
1691683057.23406-CDS-L-elsbetiae_contig1722:15233..153571691683057.23406-CDS-L-elsbetiae_contig1722:15233..15357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 15234..15357 -
1622815717.9507492-CDS-L-elsbetiae_contig1722:15543..156441622815717.9507492-CDS-L-elsbetiae_contig1722:15543..15644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 15544..15644 -
1691683057.2430165-CDS-L-elsbetiae_contig1722:15543..156441691683057.2430165-CDS-L-elsbetiae_contig1722:15543..15644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 15544..15644 -
1622815717.9639723-CDS-L-elsbetiae_contig1722:15774..158671622815717.9639723-CDS-L-elsbetiae_contig1722:15774..15867Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 15775..15867 -
1691683057.252318-CDS-L-elsbetiae_contig1722:15774..158671691683057.252318-CDS-L-elsbetiae_contig1722:15774..15867Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 15775..15867 -
1622815717.9752913-CDS-L-elsbetiae_contig1722:16072..162611622815717.9752913-CDS-L-elsbetiae_contig1722:16072..16261Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 16073..16261 -
1691683057.266549-CDS-L-elsbetiae_contig1722:16072..162611691683057.266549-CDS-L-elsbetiae_contig1722:16072..16261Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 16073..16261 -
1622815717.9944117-CDS-L-elsbetiae_contig1722:16465..165321622815717.9944117-CDS-L-elsbetiae_contig1722:16465..16532Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 16466..16532 -
1691683057.2788088-CDS-L-elsbetiae_contig1722:16465..165321691683057.2788088-CDS-L-elsbetiae_contig1722:16465..16532Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 16466..16532 -
1622815718.0091555-CDS-L-elsbetiae_contig1722:16687..168091622815718.0091555-CDS-L-elsbetiae_contig1722:16687..16809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 16688..16809 -
1691683057.2880409-CDS-L-elsbetiae_contig1722:16687..168091691683057.2880409-CDS-L-elsbetiae_contig1722:16687..16809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 16688..16809 -
1622815718.02261-CDS-L-elsbetiae_contig1722:17683..177641622815718.02261-CDS-L-elsbetiae_contig1722:17683..17764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 17684..17764 -
1691683057.2969484-CDS-L-elsbetiae_contig1722:17683..177641691683057.2969484-CDS-L-elsbetiae_contig1722:17683..17764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 17684..17764 -
1622815718.0373762-CDS-L-elsbetiae_contig1722:19664..197311622815718.0373762-CDS-L-elsbetiae_contig1722:19664..19731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 19665..19731 -
1691683057.305068-CDS-L-elsbetiae_contig1722:19664..197311691683057.305068-CDS-L-elsbetiae_contig1722:19664..19731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 19665..19731 -
1622815718.0506337-CDS-L-elsbetiae_contig1722:21161..212761622815718.0506337-CDS-L-elsbetiae_contig1722:21161..21276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 21162..21276 -
1691683057.3135214-CDS-L-elsbetiae_contig1722:21161..212761691683057.3135214-CDS-L-elsbetiae_contig1722:21161..21276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 21162..21276 -
1622815718.0660892-CDS-L-elsbetiae_contig1722:21741..218481622815718.0660892-CDS-L-elsbetiae_contig1722:21741..21848Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 21742..21848 -
1691683057.324284-CDS-L-elsbetiae_contig1722:21741..218481691683057.324284-CDS-L-elsbetiae_contig1722:21741..21848Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 21742..21848 -
1622815718.0792377-CDS-L-elsbetiae_contig1722:22432..225181622815718.0792377-CDS-L-elsbetiae_contig1722:22432..22518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 22433..22518 -
1691683057.3336244-CDS-L-elsbetiae_contig1722:22432..225181691683057.3336244-CDS-L-elsbetiae_contig1722:22432..22518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 22433..22518 -
1622815718.0909183-CDS-L-elsbetiae_contig1722:22708..228371622815718.0909183-CDS-L-elsbetiae_contig1722:22708..22837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 22709..22837 -
1691683057.345332-CDS-L-elsbetiae_contig1722:22708..228371691683057.345332-CDS-L-elsbetiae_contig1722:22708..22837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1722 22709..22837 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1722.4795.1prot_L-elsbetiae_contig1722.4795.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1722 14755..22837 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1722.4795.1

>prot_L-elsbetiae_contig1722.4795.1 ID=prot_L-elsbetiae_contig1722.4795.1|Name=mRNA_L-elsbetiae_contig1722.4795.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=469bp
MVALTGFAMNFLSLSTPRVASRQAPRWARRWATPCLRMSSDQKGAAPVTP
DFVTPVEVASINLSKPTKNPERPSKWAGLKGLDERTAGSLIPETLQGMEE
DVEFKLTAAKLKEMGQKKLTLEEKKIRRRALKDRNLPSFRQLIQEQDIKI
NREKSTIFQLNIGLFCNQACSHCHVESSPQRKEMVSKEVAERCIEIIKNS
PTVKTLDITGGAPELNEHFRYMVEQGRALGLDVIDRCNLTVLQEPGQEDL
AEFLAKHKVHVVASLPCYSPKNVNMQRGSGVFDRSIKGLMKLNALGYGQA
DSDLKLDLVYNPVGGFLPPEQAALETKYKEELDEAFGIKFNNLFTITNMP
IKRFADFLYRRGELQEYMELLVRNFNAGACSGLMCKDTINVGWDGHIFDC
DFNQQLELGMGTAGTNARASDKLRSVQEGYSVFDVDSVDDMQTTEIVLES
HCYGCTAGNGSSCQGQTA*
back to top

mRNA from alignment at L-elsbetiae_contig1722:13855..22878-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1722.4795.1 ID=mRNA_L-elsbetiae_contig1722.4795.1|Name=mRNA_L-elsbetiae_contig1722.4795.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9024bp|location=Sequence derived from alignment at L-elsbetiae_contig1722:13855..22878- (Laminarionema elsbetiae ELsaHSoW15)
GAGATCCTCACAAAAAAAACGGTCCATCTCTGAGTCTCCCCATGGTTGCA CTAACCGGGTTCGCCATGAATTTCCTTTCCCTTTCAACGCCCCGTGTCGC ATCACGGCAAGCACCCCGGTGGGCGCGGCGATGGGCTACGCCTTGCTTGA GGATGTCGTCGGACCAAAAGGTGCGCTCTTGTTTGGATTGCCTGCTGACA GAGTTACCAGTTGCGCAGGCTCGGAAACGGGGGGGCTGGCTTGTCTACCC CGGAAACGAACTCATCTGATATATGTGCTATCTACTGTGGTTGTGTGATG GGACGATGCACAACTTCGCCGGTAATCTTGGCGAGCGGTGGTTCTTTTCC TTTGTCGCAGGGTGCGGCACCGGTCACTCCTGACTTTGTCACGCCCGTGG AGGTAGCCAGCATCAACCTGTCCAAGCCAACTAAGAACCCCGAAAGGTCA GAGTTGGTGCCAGCCGAGTCGAATAATGGTAGCCTTTCGAAATAGCGCCA TTGGTGCGTCACGATCACGAAAGGAAGGAAATTGAACAGTTGAAAAATTG AACTTCGGGTAGTTAGTCTTTGAAACATCCCGCGTGCCGGATCCCTGGCA TGCTGTACGGCTGCACTACAAGCATGTTCTCCAGCTGTGCCAATTCGTGG TACTTGGTGTTCGACGCAGTGAAATTGGCTCGTCGGTCTCTTCGCTGCCC TGTGTAAAAAAATGTATATTTCTGCGGAGCATTTTTAAGGTGTAGTCTAT GCAGGTAGGTCGTGGCTGCGGGGAACAGAAGGAACGGTAGCCGAGCCATC TTGACGGTAGGTATATACTCGGAGTATGTACATACGTCATGCTGTGTTCG CCATTTATTTGTCGCCTTGTTTCCCTCCTCGCGAATTCAACCCCCATACG GCTTGAAGTGTGAACTGATTTCAGCGTGCAAATAAAACCTTCGCCCGGGT TCTGACCACCAAGAGGCTGCATGTACTTACTCCAACGAAATTATATACGC TTGTCTCGTTTCCGGCCCGCTTTAATTCAGGCCGAGCAAGTGGGCGGGTC TGAAAGGCCTGGATGAACGCACGGCGGGATCGCTCATTCCGGAGACCCTG CAAGGGATGGAAGAAGACGTAGAGTTCAAGCTGACAGGTACAGCCCTGCT GTGTGGAATTTTTAGGATGTACTTCTATGTACACAACATCCACGGGCAAT CCCAATGCACTGGCTGCCTTCCCATGAAGTCCGCGAAACATGTGCCCGGG AGAGCAGAGCAAGCACCTGCCTTCCAATAATTCACACCAACAAGCTACAA AAAGTTGTGACGCATGTGGTAACTTTTTGTATGCGGTTGGTTGACTTAGT CTTGAGAAGGTGGCGGCCGAAGATGCCGTGTCGTTGTCTATCTATTTCGA CGCCACAGCACCAGCATCGAAGACCATTGAAATAGTATTATCAACAATAG GACTGCTGTTGTTGGATCCTCATCGATTTCGTTGCGGGTATAGCAGTTTG CCACGGCAGCCGTTTCTTTAGTAGTAGTTCGTTTTTTCCAGGAGTGCACC ACCGAATTGTGTAGCGCCCGCACAACCGCCCGCACAACTTCGGAACTTGC AGCGGCCAAGTTAAAGGAAATGGGGCAAAAGAAACTGACACTGGAAGAAA AGAAGATACGGCGGCGCGCTCTCAAGGATCGCAACCTGCCCAGCTTCCGG CAGCTCATCCAGGAGCAGTGAGTGACTGGTGTATGTGTGTGTTTTCCCAA TTTTCAATTGGTTGTTCTTTCAGGCCTTTCTCGTGAGCTATATCTTTTTT TGTGACAGAAATCCTGTGACAGAAAACATGACTCATTTTTTCCTTTAGTT AAATCCCTATCGATTGCAGGAGTGCCTCAGCACAGAGCAGTAGCTGCTCT CTGCCAAGCGTCAACCTCAGTCTCGAAGGTTCTGATCAGATACGGCCGTC GACTTTGTGGACCGAATCCATACTGTAACCCCTATTGATCTCGTAGATCT TCGTTTTTTAGGGATATATTTCTCAAAGACGAAGCAATCGCCTATTACTT CCGCGGGCGCCTCGACACACAACCGTAGCTGACACATGCGATGCACACAA CACAGCAATGCACATCACACTACACGACAAGAGATTATGTGAACACACAG CAGCAGCGCACGTCGGTGCTGTTTCCCGTTGTGTCAGCAGCAGAAAGAGG TTGGCAGCAACCAGCAACCGACGCTGTGCTGCTCGCGTCTCGTTTCGAAA GGTCTCGTCTTGTGTGTTCCCCGCCACGCCCTACAACTCCGCAGACGTTC CCACTGCTTCCTAGACATCATCAGTGTGGTATGATCGGTGTCGGCTGTCA TCTGTGGAGGTGTAGCGTTACTTTGTCTATAATAGTCTACTGCTCTGTCT TTCCGCTGTCCGAGAGTCACCGACGTAAAAAATCATTTTTTTGTTGGCAG TGTCCAGCTGGGTTTGTACGTTATTTCGCACAAAAACAACATAACATGAC AAAGAGGCGTTTTGCTTCGAATAGCGATTGGCGTTCCCCCGGATGCATCA GCGACTCTCACGCTAGGCGTAGAGTACTCTCTGGTGTCGGTAGTGTATCT CATCGGCACACAGTTTGTTCCGTTTGCAAGGGAAATGGTTCAAGTATAAT TGCTTCCAAGGGGGTGGCACTAACGCGTCTCCTCCTTCGATGGTGGTTGG AAATCCGGAAAACAGGTCCTGTACGTGTACGTGAGGACGGACCTAGTAGT CGTGGCTGGGGATAGTACGGGAAAACCTAGCGGGAACTTGCCGGGCAACG GCTCAGGTCTCAGCGCTGCCTACTTGTGGGCCATTGCGAACGTAGAACAA GAACGTCTTTTGGACTAGACTAGAACGATTGTGTGTGACGCTACCGTTCG TTGTCGTGTGTGTGTTTATCGTTGTGTTCCGGTCGAAAGAAAGGAAAATA AAATTGGAAGTGCGATGCCACGCAGAGCAATTTATGTATATACTAAACGA ACGAGGATTGGGGAGCGAAGCTTTTTGATCGGCATACATAGGTAGCAGTA CATAGCGGTGGCAACACGATCTTGCCATTAAAGCAAACCATATGTATTTA CGTCGAAAAATCGGATTCGCAAACAATCGCCGTTTTACCGTCTCTAGGGA TATCAAGATCAATCGCGAGAAGTCAACCATTTTCCAGCTCAACATTGGGC TCTTCTGCAACCAGGTGAGAATCGCGGTACCTCTAGTGTTGTTCTGAAGG GGGTGCTGACAACGGTGGTTTAGCAGTTTCACTCTAAAACCAAGATAATA AGGCCGTGTAAAACGAAACCCAACCTCCCGTCGAAAGTTAGGCAGTTTCG GGCATGGAATCACTAGAGTTAACCATGGAGAAGTCACATGTGTGTTGGCG CGATCAGATCTGCTGCTGGAGCGGAGATATCAAAGGGCGCAGCAGTCACT GGACTGTCCGCAAATTTGACCGACAACAAACGTTTGTCACGGCTGTGCTT GCTGCCACGGGCCGTAACCGCCTGAACTGGGGGTCCTCAGCAGTAGCTGG TGGTATCAGCTACTGCTGTAGACCCCCAGTCGAGGAGATTGTGGTCCGTG GCAGCGAGCACAGCAGTGGGAGACAGAATGTGACGATCAATTTGCGGAGA TTCTCGGTCACTGCGACGACTCTCGATCTCCCGCTCCAGCAGCAGATCTA AGCGCCCCAATACACACGTGACCTCTCCGTGGTTAGCTCTAGTGATTCCA TTCCCGAAACTGCTTAAATTACCAAGGCAGACCTTATTTGAGCGCCCGCC GTTTTGGCTCTATTGACTTGATTTTAGGCTGCTGCAATATGTATCTTGAT TTCAGACTGTGGGGGGGTGATAAACTACGTGATACGTATGTAAAGAGCAG CCCCGCTCGCCGCTGGGTAAGCGAACCAGCACTTATCTTCTTGCGCAACC CTTCCTTACTGGTCTGGTGTATCTGCTGTGTGATTGTGGGTGCTCGTTCG GTCTTTTTCAAACCCAGCCAACCCCAAGATCGGTTGTCATCACCCCCTTA ACCCCTCTGGGACTAGCAGCAAAACATGCACCGCGGCCGTGTCGCCGCCC GGTAACTCACTGGGGACGTCTGTTGGCACACTAGAAAGCTTAATCGGCCC TCAAAACGTCACTGCTAGTGTTCGCTCGAAGCTTTATTCTCCATTGTAGC GCTGTCCCGGCTCTGAACTCTTCTGAAAGTACTCTGAATTCAGTATAATA CCATATAATCACAAAAAATGATCACTAAATTGGCCCCGAAGTGCCCTGCG GCAATATCGTACTTGTGTACTTCTCGGGGGGGCGCCGGATAGAGTCCCGC CTCTGGCGCTCGGTTACTTTGCAATAATACCCAACGGCAACAGCAAGCAG ATCGATCTACACCGGTTGTTGGTGTATGTAGACGGAAATTGAAGAGGTGT TGCGATGTGCTGTTGTAGATAATATGTACTTGTGCTGGTGGTGTGGGTGT GTATGTGTGTCTTGGCATGCAGCGTCATATGACGTGTGGGATGAGAGCGA GAGAGAGCAACAACCGATTTTTCGTAAATAACCAATAAACCCCAACTCCC AAATGTAACAGCCAAGCAGCAGCGACGGCGTCAGCTGTAGCGTTAAAACC CTGCCGCTGCTGTGCCACCCCATCTGGGTGGCCATGTGACCAATCGGTTG TTGATGTTATCGTCCCGATGTGCCGACCAGCCCAGGGTCGCACAAAACCG GGCGTCTCACTGATCATTTTTTTGTATTCACCAAAACCCGCTTGAAGTCC CAGAAGGGTTATAACAAGAAACCAATGAGTCAGTACTCCCGCGACCCGAT TTGTTTCTACGTTTGTATCACGGTGATGGATGCCGATATTGTCGGCTGCC ACCCCCCCCGTGCCAGCTGCGGGCGCGTCAATCATGGTGCTGCGCGGCGC CACTCGCGGCACACGTTAACTGCCGTAGCAGCCCACTTTCCGAGCACGAC TATGGCAGAGACGCCTGCCTGGATGATTTTGCCCTGATCCCTTGAGAAAC CGCCTACTTTCGCAGTTGCTTTGGAACCAAACTCAAACATTCACCCACGC TGCGAACGCAACAGGCCTGCAGCCATTGCCACGTAGAGTCTTCCCCCCAG CGAAAGGAGATGGTGAGCAAGGAGGTGGCGGAGCGATGCATCGAGGTGAG ATTTTTTTTGTGTTCATATTTTAAACAAGGTCTGCGACCCCGTTCCAGTG GAAGCGCTTCCAAGTCAGTGATAAATGCCCTACTCCCATGAGGTGCTGCT GTTGTCGAAAAGTTGAACAGAATGTAGGTGTGACTGATGAAAACACAAAA ACGGCGGTTGGGCTTTGTGAACATATGCTTGAAAACACCCCCGTCAGCTA CCACATCAGAGTGCACGCCAAGGATGTGCAAGTAGAACTCACCTTGTGTT GGCGCTGCCGAGTGTACCCGTGTGCACAACAATATACCATGAAAACCAGA GACAGAGAGAACAGACAGCGAGAGAGAGAGAACGGAATATTACAGGAAGG GGCGGTGACTACCAGCCGAGAGAGAGTAACAGAGGGAGCCAGACGAAAAA TAGCGGCAACATCTCCTGAGTACAGGAAATAAATACTAGACACAGAAAGA GAGTTCCTTGAGAAAAAAAGAGCGAGGGTAAGAAGGCTTGACATGTACGG TGGGATTGTTGTATAGTCACCGAGGTGCTGATTGGAGTAGAACGAGAGAG ACCTCGAAAGGCGTGAGACCGCAGGAGTATTCACAATTCCGGGCGGAATG GAGCGCCCTCTCGTGCGTGACAGCCCGGGCTCCTTTGAAAACCGCCAATC GAAAAATAACTAACGCGAGGTTGGCGGTAGCGTGTGAGAGGGGATGTTAC AATGGCATAAACGATTGTATTTTGCTGCTGCTGCTGCTGCTGTGTACCAA CCTCGAACAGTTATGTTTGTCTTCAGCAAAAGGAACCACATTTCGGCTTG CACCCCGCGCCTTAGTTGTGAGGCACATTCGCCCTGACGTCAGGTACATA CGTGTCCGTTGCGCGACAGATAATTAAAAACAGCCCAACGGTCAAGACCT TAGACATCACTGGAGGAGCTCCTGAGCTCAATGAACATTTTCGATACATG GTGGAGCAAGGACGAGCTCTCGGCCTTGACGTCATCGACCGGTGAGCAAG AAACTACGCGAAGGATTCCAAGCGATGGATTCACCTCACCAGGTCTTAGT TTACTTGTTAACTTTTGTACGATGGCTTAAGGGTATTAATTTTCCTCTCG TGTGTGCTTTGCCCCGGGGGATTGTCTTCGGGCGTCATCTCTGCAGTTGC AACCTGACCGTCCTTCAAGAGCCAGGGCAAGAAGACCTCGCAGAGTTCTT GGCGAAGCACAAGGTGCGTCTCAATCAAATACCGTGAACAACGGAGGATA ACACATTGCCGGTGACAACTGTTTCTCAAATCTCAAATATATTTTTTTAA CCTTGCATGCGTCTTTTCAAGCAAGATTAGATTGAAGGGGTGCAGAGATG CCCCCACCGCAGACCAGAGCGCTCCATAAATATCTCTCAAAATTCGTTTT TACGTGTTCTTTCTCAGGTCCACGTGGTGGCATCCCTTCCGTGCTATTCA CCAAAGAACGTCAACATGCAGCGTGGCAGTGGGGTGTTTGATCGTAGCAT CAAGGGTCTCATGAAGCTGAACGCGCTCGGATACGGTCAAGCCGACTCAG ACCTGAAGCTTGACCTCGTGTATAACCCTGTAGGAGGGTTCCTCCCCCCT GAACAGGTGAGTAAGTTGCGCAACCGCCCCCATCAACACAGCCTCGGAGC TTGATGGTTGCTAAAGTCGATGGCCTGGGACCACTTATCACCCTCCCCGG GTTAGTGGTGCTTGACTTTTATTCGGGCGTTCATGCAATTAACGTCTGTG TAGGCCAACGTTTCTTGAGACACAGAGTTTTGTTCTGGCAACGCTTTTCT CTTGTTGAAAGGCGGCATTGGAGACCAAGTACAAGGAAGAGCTGGACGAA GCATTTGGCATCAAGTTTAATAATCTCTTCACCATCACCAACATGCCCAT CAAGGTGAGCGCCAAATCCCAGGCAGGAACGCCTACTGTATTCTACTACT ACGAATACTGCCATGCTACGAGTAGTCATAAACATGGGTGTGTCCTTCAT GATGAACCAACCCGGCGGCTTGATTTGAGTACAGCGCTTTGCGGACTTCC TGTACCGGAGGGGAGAACTACAGGAGTACATGGAGCTGCTGGTCCGCAAC TTCAACGCGGGAGCATGCAGTGGGCTCATGTGCAAGTGAGATGTGCATTT TTTTTTTTTTATGGCAGCTCCTACTTGCGAGGTGTCGTTTGAAGTAAAGA GGGAATTACATGTTTAGCGGTCGAAGGTCGTCTCTTCGTGACAGCCGCTC GTTCGTGTTTTAGCAGAATTGCCACGCCTATGTAGATCTCTGAAGTTTAA CACTTGTACTCGCCCGAACAGAGACACGATTAACGTCGGGTGGGATGGAC ATATCTTCGACTGCGACTTCAACCAACAGCTAGAATTGGGCATGGGCACT GCTGGAACCAATGCTAGGGCCTCGGACAAGCTCCGTTCCGTGCAGGTACT AGTGGCCATATTCGATGTTATTGCACGGCCAAGGTCTCTTGAGAGTGCAG TCATGCGGTACTGCTGAGTCAGGTGTTTGCTTCGCATTTCATCTTCCGCT CACGGTGGGGTTTATTTGAGGTGCTAACTCCAGTTCAATAACATCGAATA TTTTCTCCCCGAAAAAATTGGTGTATCTTGCGGCCGAGCGTCCACTGTAA ATCTGAGTTTCATTAACTCTCAACCTCTCAGTTGAATTGATTCGGTTATG GGAGCTTGGGATGTGAAGAGCGCTCCTCGGTACAGGAGGCTTCTGTTGCT TTGCTAACTGTTTATTTCTCTGCTTGGCTGTCGACTGTACACTTTCAGGA GGGCTACTCCGTCTTTGACGTCGACTCTGTAGATGACATGCAGACGACCG AAATTGTGCTCGAAAGCCACTGCTACGGGTGCACCGCGGGCAATGGATCA AGCTGCCAAGGCCAAACCGCTTGAGAGATAGTCCGGCGTATTGTTGTCTG TGCGCTTCCACGTCTAGCGGTGTTTTACAATTTTGCCATTTGCTGGGCTT CGTTGGCGTATTGTGTACTGCTGTCCGCCCCGATCCCCTAATCACCAACG GACGAGCTTCATCATACATATGGAGCCGGCAATTTTTCACGCTTGTAAGG ATCATTTACAGGGAAAACACGTTATCTAGCGTTGCCGACGGTCCCCTACC GTTTTGAGGTACATCGCGAAAGAAACAGCCACAGTATCGTAGAAGGGAAC CAACTCTGATGAAGAGCATCGTAGAAGGGAACCCGATCATTGCAACTGTG TTCCATGTATTGACAGGGTTGCATCCAAACCCTAGAACAGGAACCCTTCT TGTCCTTTGATGTAGTAGTAACAGAGTTACCTCTCTACCAATCGGAATTA CAATTTTTCAGAGGTATTTAAAGGTCAAATCACGACCCGTGGGTCGTGTC AAGCGAATTTGGAATCTGATGGGTCGTGTTATGTGTCAAGACGCTTGACA CGTTTGACGGGTCGTGTCAGTGAAACGGGATGGAATAACAGGTATATTTG TCGGGGACCGTGTTTTTGGGCGGGAACAAGTTTCGCGGTACCGCAGGGTG GCGAGAACACACCGGCGGTACGTGTTAGTTCGGTAGTACAGCCTTTGCGG TTGTCGGTTCCGCGAATAATGGCGGGACTTTCGTCGGCGGTTCGGTTTGC AAGATGGCGGTAAACCGCTGCCGGGAATACAATTCAGTGGTGTGATGTTT CAGCGATTTTTTGTTTTTCGGTTTCCTTTCGTTTTCCGAAAAAAAACAAT AGAAAAATAAGCGGAAATGCAAAAAAAAATGATGCAAGTTACATCGAGTT GATGCACAACGCCCAATAACACTC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1722:13855..22878-

>mRNA_L-elsbetiae_contig1722.4795.1 ID=mRNA_L-elsbetiae_contig1722.4795.1|Name=mRNA_L-elsbetiae_contig1722.4795.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2814bp|location=Sequence derived from alignment at L-elsbetiae_contig1722:13855..22878- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTTGCACTAACCGGGTTCGCCATGAATTTCCTTTCCCTTTCAACGCC
CCGTGTCGCATCACGGCAAGCACCCCGGTGGGCGCGGCGATGGGCTACGC
CTTGCTTGAGGATGTCGTCGGACCAAAAGATGGTTGCACTAACCGGGTTC
GCCATGAATTTCCTTTCCCTTTCAACGCCCCGTGTCGCATCACGGCAAGC
ACCCCGGTGGGCGCGGCGATGGGCTACGCCTTGCTTGAGGATGTCGTCGG
ACCAAAAGGGTGCGGCACCGGTCACTCCTGACTTTGTCACGCCCGTGGAG
GTAGCCAGCATCAACCTGTCCAAGCCAACTAAGAACCCCGAAAGGGTGCG
GCACCGGTCACTCCTGACTTTGTCACGCCCGTGGAGGTAGCCAGCATCAA
CCTGTCCAAGCCAACTAAGAACCCCGAAAGGCCGAGCAAGTGGGCGGGTC
TGAAAGGCCTGGATGAACGCACGGCGGGATCGCTCATTCCGGAGACCCTG
CAAGGGATGGAAGAAGACGTAGAGTTCAAGCTGACAGGCCGAGCAAGTGG
GCGGGTCTGAAAGGCCTGGATGAACGCACGGCGGGATCGCTCATTCCGGA
GACCCTGCAAGGGATGGAAGAAGACGTAGAGTTCAAGCTGACAGCGGCCA
AGTTAAAGGAAATGGGGCAAAAGAAACTGACACTGGAAGAAAAGAAGATA
CGGCGGCGCGCTCTCAAGGATCGCAACCTGCCCAGCTTCCGGCAGCTCAT
CCAGGAGCACGGCCAAGTTAAAGGAAATGGGGCAAAAGAAACTGACACTG
GAAGAAAAGAAGATACGGCGGCGCGCTCTCAAGGATCGCAACCTGCCCAG
CTTCCGGCAGCTCATCCAGGAGCAGGATATCAAGATCAATCGCGAGAAGT
CAACCATTTTCCAGCTCAACATTGGGCTCTTCTGCAACCAGGGATATCAA
GATCAATCGCGAGAAGTCAACCATTTTCCAGCTCAACATTGGGCTCTTCT
GCAACCAGGCCTGCAGCCATTGCCACGTAGAGTCTTCCCCCCAGCGAAAG
GAGATGGTGAGCAAGGAGGTGGCGGAGCGATGCATCGAGGCCTGCAGCCA
TTGCCACGTAGAGTCTTCCCCCCAGCGAAAGGAGATGGTGAGCAAGGAGG
TGGCGGAGCGATGCATCGAGATAATTAAAAACAGCCCAACGGTCAAGACC
TTAGACATCACTGGAGGAGCTCCTGAGCTCAATGAACATTTTCGATACAT
GGTGGAGCAAGGACGAGCTCTCGGCCTTGACGTCATCGACCGATAATTAA
AAACAGCCCAACGGTCAAGACCTTAGACATCACTGGAGGAGCTCCTGAGC
TCAATGAACATTTTCGATACATGGTGGAGCAAGGACGAGCTCTCGGCCTT
GACGTCATCGACCGTTGCAACCTGACCGTCCTTCAAGAGCCAGGGCAAGA
AGACCTCGCAGAGTTCTTGGCGAAGCACAAGTTGCAACCTGACCGTCCTT
CAAGAGCCAGGGCAAGAAGACCTCGCAGAGTTCTTGGCGAAGCACAAGGT
CCACGTGGTGGCATCCCTTCCGTGCTATTCACCAAAGAACGTCAACATGC
AGCGTGGCAGTGGGGTGTTTGATCGTAGCATCAAGGGTCTCATGAAGCTG
AACGCGCTCGGATACGGTCAAGCCGACTCAGACCTGAAGCTTGACCTCGT
GTATAACCCTGTAGGAGGGTTCCTCCCCCCTGAACAGGTCCACGTGGTGG
CATCCCTTCCGTGCTATTCACCAAAGAACGTCAACATGCAGCGTGGCAGT
GGGGTGTTTGATCGTAGCATCAAGGGTCTCATGAAGCTGAACGCGCTCGG
ATACGGTCAAGCCGACTCAGACCTGAAGCTTGACCTCGTGTATAACCCTG
TAGGAGGGTTCCTCCCCCCTGAACAGGCGGCATTGGAGACCAAGTACAAG
GAAGAGCTGGACGAAGCATTTGGCATCAAGTTTAATAATCTCTTCACCAT
CACCAACATGCCCATCAAGGCGGCATTGGAGACCAAGTACAAGGAAGAGC
TGGACGAAGCATTTGGCATCAAGTTTAATAATCTCTTCACCATCACCAAC
ATGCCCATCAAGCGCTTTGCGGACTTCCTGTACCGGAGGGGAGAACTACA
GGAGTACATGGAGCTGCTGGTCCGCAACTTCAACGCGGGAGCATGCAGTG
GGCTCATGTGCAACGCTTTGCGGACTTCCTGTACCGGAGGGGAGAACTAC
AGGAGTACATGGAGCTGCTGGTCCGCAACTTCAACGCGGGAGCATGCAGT
GGGCTCATGTGCAAAGACACGATTAACGTCGGGTGGGATGGACATATCTT
CGACTGCGACTTCAACCAACAGCTAGAATTGGGCATGGGCACTGCTGGAA
CCAATGCTAGGGCCTCGGACAAGCTCCGTTCCGTGCAGAGACACGATTAA
CGTCGGGTGGGATGGACATATCTTCGACTGCGACTTCAACCAACAGCTAG
AATTGGGCATGGGCACTGCTGGAACCAATGCTAGGGCCTCGGACAAGCTC
CGTTCCGTGCAGGAGGGCTACTCCGTCTTTGACGTCGACTCTGTAGATGA
CATGCAGACGACCGAAATTGTGCTCGAAAGCCACTGCTACGGGTGCACCG
CGGGCAATGGATCAAGCTGCCAAGGCCAAACCGCTTGAGAGGGCTACTCC
GTCTTTGACGTCGACTCTGTAGATGACATGCAGACGACCGAAATTGTGCT
CGAAAGCCACTGCTACGGGTGCACCGCGGGCAATGGATCAAGCTGCCAAG
GCCAAACCGCTTGA
back to top