mRNA_L-elsbetiae_contig1715.4766.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A6H5KAX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX6_9PHAE) HSP 1 Score: 279 bits (714), Expect = 1.690e-78 Identity = 172/356 (48.31%), Postives = 219/356 (61.52%), Query Frame = 2 Query: 2 LQLAEGLHTAEIEELAKRVTTVPGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRS----SFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLIWSTP 1057 L LAEGLHT ++ LAK + + LV LAGRQGA ADV+ASRLCV+L IKG++PAV++T N+ + A +G + S S+Q D ALG + ALL + + G S N G A + + G A + G DIVVVHGC LD +LL + L PA+A+ VF+D+VPQVCVDN+TPVNGADVR+LR+L+AA K A++ A +S+GRS S F FLE W AE+REQ R+F+ V +NTALP+DLN LKP+ EPLLR+V PPT +G GGDGCRSS YALSRS+L +L+LCEALHA +P TSVL LI P Sbjct: 848 LLLAEGLHTDQLGALAKTII-LSNAQLVILAGRQGASADVVASRLCVELTIKGKSPAVVNTQNYRRQEAPEARAEAYMGQSQPHASSSASVSNQQLDLAALGRVVAALLGQDQDGGGFSSGNNSGGLAVSDGNAVAGARATSRGWH---DIVVVHGCSALDADLLSMEDIDLRPAKAIKVFVDVVPQVCVDNVTPVNGADVRMLRALLAARGRLAKTAQAEVL--------AKASNGRSIVKRSNFVAR-FLEKWHVAEQREQGFWRTFQAAADVQINTALPYDLNALKPLVEPLLRSVPPPT----EGSDGGDGCRSSAYALSRSVLHMLQLCEALHA-QLPGTSVLRELIRPRP 1185
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: D7G8F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F4_ECTSI) HSP 1 Score: 269 bits (688), Expect = 7.500e-75 Identity = 166/352 (47.16%), Postives = 209/352 (59.38%), Query Frame = 2 Query: 2 LQLAEGLHTAEIEELAKRVTTVPGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLIWSTP 1057 L LAEGLHT + LV LAGRQGA AD +ASRLCV+L IKG++PAV++T N+ + A +G + S S+Q DS ALG + ALL + + G N A + + G A + G DIVVVHGC LD ELL + GL PA+A+ VF+D+VPQV VDN+TPVNGADVR+LR+L+AA + K ++ + G+ + S FD FLE W EEREQ L SF+ VH+NTALP+DLNVLKP+ EPLLR+V PP +G GGDGCRSS YALSRS+L +L+LCEALHA +P TSVL LI P Sbjct: 893 LLLAEGLHTDQ---------------LVILAGRQGASADAVASRLCVELAIKGKSPAVVNTQNYRCPEAPEARAEAYMGQSQHHASSSASVSNQQLDSRALGRVVAALLGKDKDGGGFPSGNNNSGGAVSDGNAVAGARATSRGWH---DIVVVHGCSALDAELLSMEDIGLRPAKAIKVFVDVVPQVSVDNVTPVNGADVRMLRALLAAGGGFAKAVQAEVLA----NAGSVRNIAERSNFDVASFLEEWHVTEEREQGLWWSFQAAADVHMNTALPYDLNVLKPLVEPLLRSVPPPI----EGSDGGDGCRSSAYALSRSVLHMLQLCEALHA-QLPGTSVLHELIRPRP 1217
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A800BUV2_9BACT (Nucleoside kinase (Fragment) n=1 Tax=Candidatus Bipolaricaulota bacterium TaxID=2306012 RepID=A0A800BUV2_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 4.240e-13 Identity = 93/348 (26.72%), Postives = 134/348 (38.51%), Query Frame = 2 Query: 8 LAEGLHTAEIEELAKRVTTVPG-VLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAV-SVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045 + E LH+ I E+A + P V +V +AG + + RL VQL GR P L ++ R H + P + D L L+ LL R D RG S LG + R++ I+++ G L+ L+P P E++ +++ V Q+ +D LT V D RL+R +V + DAE LE W + E+R ++ N+ALPH+L VLKP+AEPLLR V P S Y +R +LRLL + VP SVL I Sbjct: 3 VGEALHSQRIAEIAAEICARPEPVRVVLIAGPSSSGKTSFSRRLAVQLLANGRRPFPLSLDDYFLPREDSPHD---------MEGRPDFEVLEALDLELLNKQLLDLLAGKRVTLPRYDFLRGQSE----------LGPSIRLRREH--ILLIEGLHGLNPALVPKV-----PEESIFRIYVSAVAQLRLDRLTRVPTTDTRLIRRIVRDARERGSDAEMT--------------------------LEQWPSVRRGEERYIFPYQENADAMFNSALPHELAVLKPLAEPLLRQVEPD---------------SPRYPEARRLLRLLSWVQGAPKELVPEESVLREFI 283
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: UPI0016459452 (nucleoside kinase n=1 Tax=Megasphaera hominis TaxID=159836 RepID=UPI0016459452) HSP 1 Score: 62.4 bits (150), Expect = 1.580e-6 Identity = 72/349 (20.63%), Postives = 131/349 (37.54%), Query Frame = 2 Query: 2 LQLAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045 + +AE L ++ ++A + PG+ +V +AG A RL QLR+ G P + ++ ++R + P +Q D ++ G + + +G D E Q +VV G L++ L + L E V + + ++ Q+ +++ ++ +D R++R LV H+ + ++ LE W E+ ++ NTALP++L+VLKP AEPLL +V P + YA ++ +L L+ ++ A VP S+L I Sbjct: 261 IDMAEALQEKKLGQIADYIVNQKPGIKVVLIAGPSSAGKTTFCKRLTTQLRVVGLRPVRISLDDYFYNREDTPRNPDGSYDFESLRAIDVPLFNQQIDDLSQGKEVYLSRFDFVTGQRHFDEKP----------------TVLEANQP----IVVEGLHALNDSL----TYMLPRYEKVKISLGVLTQIRINDHNRISTSDTRIIRRLVRDHQFRARGPQAT--------------------------LEIWSDVRRGEETNIYPYQEDADTIFNTALPYELSVLKPFAEPLLASVEPD---------------NPYYAEAQRLLLFLKPFRSVDASVVPNNSLLREFI 544
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: UPI001A0601F3 (Nucleoside kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI001A0601F3) HSP 1 Score: 62.4 bits (150), Expect = 1.630e-6 Identity = 77/304 (25.33%), Postives = 112/304 (36.84%), Query Frame = 2 Query: 8 LAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVV----HGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLV--AAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPT 898 ++E LH I ++A ++ V LV +AG A + RL VQL G P L N+ DR P H H D AL V+L + L + RG + TG E Q D +++ HG P +P ++ A +FI + Q+ +D V D RL R +V A ++ YT + L W + E+R + V N+AL ++L VLKP+AEPLL V PP+ Sbjct: 279 VSEALHEQRIAQIADQIARQWSEVRLVLIAGPSAAGKTTFSKRLSVQLLAHGIRPFPLAMDNYFVDREKT-----------------PRDEHGHYDFEALSALDVSLFNQ-----HLLALMRGEEVQIPRFNFTTGQREKGEAVQLGPDHIIIVEGIHGLNPRLVSSVPRER-------AFRIFISALTQLNIDRHNRVPTTDTRLARRIVRDATYRGYTAEET----------------------------LNRWESVRRGEKRYIFPHQEHADVVFNSALVYELAVLKPLAEPLLLQVEPPS 525
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A7V3A251_9SPIR (Nucleoside kinase n=2 Tax=Spirochaetales bacterium TaxID=2026792 RepID=A0A7V3A251_9SPIR) HSP 1 Score: 60.8 bits (146), Expect = 4.860e-6 Identity = 75/357 (21.01%), Postives = 137/357 (38.38%), Query Frame = 2 Query: 8 LAEGLHTAEIEELAKRVTTVPG-VLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLW--DRT---SQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSG-----ASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045 +AE LH +I ++A R+ V ++ +AG + +L ++LR+ G +P V+ ++ DRT +G+ E + P ++H ++ G + L + ++G L +N G I+++ G L++ L P + PA +++ + Q+ +D T + D RL+R +V ++ A + L W + E R F+ + V N+AL ++L VLKP+AEP+L+AV P +Y+ + +L L + VP TS+L I Sbjct: 266 VAEALHNKKISQIADRIAERRDQVKVILIAGPSSSGKTTFTKKLAIELRVLGFSPVVVSLDDYFVPRDRTPKDEEGNYDFEA-----LEAIDIPLLNEHLLNLFQGKEVEVPLFDFKTGNRKEAGRLLKINPNG-------------------------ILLMEGIHGLNDRLTPE----IDPAWKFKIYVSALTQLNIDEHTRIPTTDNRLIRRIVRDYQFRGHTA--------------------------YRTLTMWPSVRRGEDRNIFPFQESADVAFNSALDYELGVLKPIAEPILKAVKP---------------HHEVYSEAIRLLSFLNDFLPIPVKYVPETSILREFI 547
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A413QV35_9FIRM (Nucleoside kinase n=4 Tax=Megasphaera TaxID=906 RepID=A0A413QV35_9FIRM) HSP 1 Score: 60.1 bits (144), Expect = 8.390e-6 Identity = 71/349 (20.34%), Postives = 131/349 (37.54%), Query Frame = 2 Query: 2 LQLAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045 + +AE L ++ ELA + P + +V +AG A RL QLR+ G P + ++ ++R + P +Q D + G + E G D R + +VV G L++ L + L E V + + ++ Q+ +++ ++ +D R++R +V H+ + E+ +E W E++ ++ NTALP++L VLKP AEPLL ++ G+D S YA ++ +++ L+ + + + VP S+L I Sbjct: 261 VDMAEALQEKKLAELADYIVAQRPKIKVVLIAGPSSAGKTTFCKRLTTQLRVDGLRPVRISLDDYFYNREDTPRNPDGSYDFESLRAIDVPLFNQQIDDLNQGKDVHLARFEFVEGKRYFDEK--------------------PTRLEPGQPIVVEGLHALNDSL----TYMLPRYEKVKISLGVLTQIRINDHNRISTSDTRIIRRMVRDHQFRGRGPEAT--------------------------MEIWGDVRRGEEKNIYPYQEDADTIFNTALPYELAVLKPYAEPLLESI------GQD---------SPYYAEAQRLVKFLKPFKPVDSSVVPMNSLLREFI 544
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A7V8A4H8_9BACT (Uridine kinase n=1 Tax=Fusobacteria bacterium TaxID=2060921 RepID=A0A7V8A4H8_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 1.940e-5 Identity = 34/106 (32.08%), Postives = 50/106 (47.17%), Query Frame = 2 Query: 728 DTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045 DT W + + E+ ++ +H N++LPH+LNVLK AEPLL+ V S Y ++ +L +LR CE L A VP+ S+L I Sbjct: 449 DTEKTFSIWPSVRKGEENNIFKYQELADIHFNSSLPHELNVLKVYAEPLLKTVT---------------ADSIYYIEAQHLLNILRFCEPLDAMWVPSNSILREFI 539
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A1I0QCL7_9FIRM (Uridine kinase n=1 Tax=[Clostridium] fimetarium TaxID=99656 RepID=A0A1I0QCL7_9FIRM) HSP 1 Score: 58.2 bits (139), Expect = 3.320e-5 Identity = 69/291 (23.71%), Postives = 110/291 (37.80%), Query Frame = 2 Query: 14 EGLHTAEIEELAKRVTTVPGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAV 886 E L +I E+A+ +T++P V +AG + + RL +QLR G P + N+ +R + G+ + H +AL + L E R+ + G + GD+ G DI+V+ G L++E+ L ++I + Q+ VD V D RL+R LV ++ AE L W + E+ F+ V N+AL H+L VLKP AEPLL ++ Sbjct: 251 EALQEQKIAEIARTITSMPEKKFVMIAGPSSSGKTTFSHRLSIQLRACGLKPHPIAVDNYFVEREQ-----TPIDENGISNFED-----LHAIDIALFNMHMKELLEGRTVEIPTFNFITGKKEYRGDYRKLGKE----------DILVIEGIHSLNDEM----SNALPRESKFKIYISALTQLNVDEHNRVATTDGRLIRRLVRDARTRGASAEKT--------------------------LSMWESVRRGEELNIFPFQEEADVMFNSALVHELAVLKPYAEPLLFSI 491
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A0J6ZLM1_9FIRM (Uridine kinase n=1 Tax=Megasphaera cerevisiae DSM 20462 TaxID=1122219 RepID=A0A0J6ZLM1_9FIRM) HSP 1 Score: 57.8 bits (138), Expect = 4.450e-5 Identity = 72/354 (20.34%), Postives = 132/354 (37.29%), Query Frame = 2 Query: 2 LQLAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDI-----VVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045 + +AE L ++ ELA V T P + +V +AG A RL QLR+ G P + ++ ++R + P ++ D++ G + + +G D +K + +VV G L+N L + L E V + + ++ Q+ +++ ++ +D R++R +V + + + +E W E+ ++ NTALP++L+VLKP AEPLL+++ +D S YA ++ +L+ L AL + VP S+L I Sbjct: 261 IDMAEALQEKKMAELADYVVTQRPKIKVVLIAGPSSAGKTTFCRRLTTQLRVVGLRPVKISLDDYFYNREDTPRNPDGSYDFESLRAVDVPLFNEQIDALQQGKDVCLARFDFVTGHRYFD-------------------------EKPVHLEVDQPIVVEGLHALNNSL----TYMLPRYEKVKISLGVLTQIRINDHNRISTSDTRIIRRMVRDQQFRDRGPTAT--------------------------MEIWSDVRRGEETNIYPYQEDADTIFNTALPYELSVLKPYAEPLLKSIT------KD---------SPHYAEAQRLLKFLMPFRALKSSVVPPNSLLREFI 544 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1715.4766.1 >prot_L-elsbetiae_contig1715.4766.1 ID=prot_L-elsbetiae_contig1715.4766.1|Name=mRNA_L-elsbetiae_contig1715.4766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp MADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCback to top mRNA from alignment at L-elsbetiae_contig1715:5858..8748- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1715.4766.1 ID=mRNA_L-elsbetiae_contig1715.4766.1|Name=mRNA_L-elsbetiae_contig1715.4766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2891bp|location=Sequence derived from alignment at L-elsbetiae_contig1715:5858..8748- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1715:5858..8748- >mRNA_L-elsbetiae_contig1715.4766.1 ID=mRNA_L-elsbetiae_contig1715.4766.1|Name=mRNA_L-elsbetiae_contig1715.4766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1902bp|location=Sequence derived from alignment at L-elsbetiae_contig1715:5858..8748- (Laminarionema elsbetiae ELsaHSoW15)back to top |