prot_L-elsbetiae_contig171.4745.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig171.4745.1
Unique Nameprot_L-elsbetiae_contig171.4745.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length957
Homology
BLAST of mRNA_L-elsbetiae_contig171.4745.1 vs. uniprot
Match: D7FSK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK6_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 2.840e-109
Identity = 222/387 (57.36%), Postives = 260/387 (67.18%), Query Frame = 0
Query:  535 GTVAVARLGSHAAGVFVTITDAGHRLLIEARDFEAGPLLATSTVTFEAWTAATGMAALRPPSDNTSCKKILEDKLAALLGAGFRSRTSRLEKKRSARQAQQQQQNGEIREWRGTFLQLSEIEKG-LWQVEEDDSGGETRDASTTGAATQHKQQSSLPPV-SPRNLSPLEQKRALRLEMLTRMIDDFHAKHGRRR--GGXGSRKQRKRSICVSAMPDSAASTGAPGTVHRGLTFTGGDNPAPTAAGSASSASGDGESSAPISTQVLPFHICVCCGTEGGLGHGRRCVHTFRRCGFCRVEEVKRVLGIQDTGRRRRRGTGTSGSVRVSQRPLVA----GDADKEEDEFEWVTDSEEEDPEFECDSCGRVIEDTADRFHCETCDDYDLCQ 913
            GTV +ARLGSHA GVFV +TD G RLLIEARDFE GPLLA STV+ E WTA TG+A L PP+DN + KKILE++LAALLGAGFRSRTSRLE+KR+AR+AQQQ   G +R WRGT L+LSE+EKG L Q+EEDD+G E  DA+      +      LP + SPR+ +PLEQKRALRLEMLTRM+DDFHAKHGR R    X      KR +   A  D+   T    T     +  GG +      G     S +G+       +  P HI      +GG GHGR+C HTFRRCGFCRVEEV+RVLGI+  GR R      S  VRV   P +      D D EE++FEWVTDS+EEDPEFECDSCGRVIEDT+DRFHCETC DYDL Q
Sbjct:    2 GTVPIARLGSHAEGVFVVVTDGGRRLLIEARDFERGPLLAKSTVSLEDWTATTGIATLSPPTDNRAFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQ--GGGVR-WRGTLLELSEMEKGRLGQLEEDDNGSENNDANPDRPPPK------LPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRGVGAPAPGDARDPTTVVATGCDDESAVGGHDGERVREGPVHIVSNEGQDG-----ENDP-HITTANQAKGGRGHGRKCEHTFRRCGFCRVEEVRRVLGIRAPGRTREP-VQESMVVRVPSLPQLKFGDDQDDDNEEEDFEWVTDSDEEDPEFECDSCGRVIEDTSDRFHCETCGDYDLMQ 372          
BLAST of mRNA_L-elsbetiae_contig171.4745.1 vs. uniprot
Match: A0A6H5KMB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB6_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 2.110e-92
Identity = 185/361 (51.25%), Postives = 221/361 (61.22%), Query Frame = 0
Query:  248 LVKATGGELALSMLRPSRVGPSNGGQDARVPTPGATGTSEGSGSGGAWRGTHQPKHLLRQPRSLTVTWDDWAHLGYGPLQWMSHAQKAFIARLSLYWISLKPPT---ETAHSPEGRVYGHVTKEAFRLPEDAFLHLRPVLYGLSRVVGTRSETLASAVRGGG------------------SPRMPMSTGSDT--NRERLRATRVFVRDEGSILRVEV-EVDGGNVGQSQHGIQRLEQTFGKEVWQETGLGELLWLDCSGRQYLARRLARQVAIDVDGHVESSSGQHAQDYIDEDAKLKLVIVSDLPLPYWAGTVAVARLGSHAAGVFVTITDAGHRLLIEARDFEAGPLLATSTVTFEAWT 584
            +VKATGGEL LS+ +PSR  PS GG        G  G +  +GSG         +  +R+  +L   W DWA  GYGPLQWMSH QK FIARLSLYW+S + P    E  ++P       V     R  ++AFLH  P+L  ++R VG  S    S+VRG G                  S R     GS+     E  R +RV VRDEG +LRVEV E +  NVG+S+ G+  L+Q FGKE W+ETGLGELLWLDCS RQYLA RLA+QVAI VD   +   GQH QD + +  K +LVI+SDLPLPYW GTV +ARLGSHA GVFV ITDAG RLLIEARDFE GPLLA STV+ E WT
Sbjct:    1 MVKATGGELTLSLFQPSRAAPSTGGTTRPAGVRGR-GAAAANGSGVHSTAGDPGRAAMRRSLTLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNAPNANETP-VRHRRRRTTKEAFLHFHPILSSVTRDVGKSSGAPGSSVRGTGXXXXXXXXXXXXXXXXXTSSRTAPRGGSEIFGGEETSRTSRVLVRDEGGVLRVEVVEAERKNVGRSKSGVSMLDQAFGKESWRETGLGELLWLDCSCRQYLALRLAQQVAIVVDDDRDGRGGQHDQDNVLK-IKPRLVIISDLPLPYWMGTVPIARLGSHAEGVFVMITDAGRRLLIEARDFEGGPLLAKSTVSLEDWT 358          
BLAST of mRNA_L-elsbetiae_contig171.4745.1 vs. uniprot
Match: D7FSK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK7_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 2.850e-44
Identity = 97/205 (47.32%), Postives = 124/205 (60.49%), Query Frame = 0
Query:  305 LRQPRSLTVTWDDWAHLGYGPLQWMSHAQKAFIARLSLYWISLKPPTETAHSPEGRVYGHVTKEAFRLPEDAFLHLRPVLYGLSRVVGTRSETLASAVRGGGSPRMPMSTGSDTNR-------------ERLRATRVFVRDEGSILRVEV-EVDGGNVGQSQHGIQRLEQTFGKEVWQETGLGELLWLDCSGRQYLARRLARQVA 495
            +R+  SL   W DWA  GYGPLQWMSH QK FIARLSLYW+S +   E  ++P       V     R  ++AFLH RP+L  ++RVVG  +    SAV G G     +  G  ++R             E  R +RVFVRDEG +LRVEV E +  N G+ + G+  L++ FGKE W+ETGL ELLWLDCS RQYLA RLA+Q++
Sbjct:    1 MRRSLSLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRRGFEEKNAPTANETP-VQHHRRRTTKEAFLHFRPILSSVTRVVGKSNGDPGSAVPGTGGSGALVVVGGASSRTVPREGSEIFGGGETSRTSRVFVRDEGGVLRVEVVEAERKNGGRPKSGVSILDEAFGKEAWRETGLEELLWLDCSCRQYLALRLAQQLS 204          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig171.4745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSK6_ECTSI2.840e-10957.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMB6_9PHAE2.110e-9251.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSK7_ECTSI2.850e-4447.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 881..926
e-value: 8.6E-5
score: 31.9
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 884..923
e-value: 3.2E-8
score: 33.2
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 881..926
score: 10.722
NoneNo IPR availableGENE3D3.30.60.90coord: 881..939
e-value: 4.4E-9
score: 38.1
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 884..943

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig171contigL-elsbetiae_contig171:11565..20263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig171.4745.1mRNA_L-elsbetiae_contig171.4745.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig171 11565..20612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig171.4745.1 ID=prot_L-elsbetiae_contig171.4745.1|Name=mRNA_L-elsbetiae_contig171.4745.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=957bp
MDDTGLNVLSDSERWHLLNRVRDRIRVSHGLLEMDMGAKLSLQSVRSTSI
HEEIYRETLALEGVSVEIVAEREEGGGLRVCSTTLPPGPERSYHIIARPE
DWAPLGHPSLLWLDCGRTASLARELTRCVRARDGSLVLQIGHHRTLRSEE
FFPMPPSLQRNSPKRTSSRFCAADTKNKQPYKHGDMSSCGASRVPSGLCS
CRIVLRTGVSLPLSIAEPPKGNDHNESSGNNDSNNMAPASSRSRWLVLVK
ATGGELALSMLRPSRVGPSNGGQDARVPTPGATGTSEGSGSGGAWRGTHQ
PKHLLRQPRSLTVTWDDWAHLGYGPLQWMSHAQKAFIARLSLYWISLKPP
TETAHSPEGRVYGHVTKEAFRLPEDAFLHLRPVLYGLSRVVGTRSETLAS
AVRGGGSPRMPMSTGSDTNRERLRATRVFVRDEGSILRVEVEVDGGNVGQ
SQHGIQRLEQTFGKEVWQETGLGELLWLDCSGRQYLARRLARQVAIDVDG
HVESSSGQHAQDYIDEDAKLKLVIVSDLPLPYWAGTVAVARLGSHAAGVF
VTITDAGHRLLIEARDFEAGPLLATSTVTFEAWTAATGMAALRPPSDNTS
CKKILEDKLAALLGAGFRSRTSRLEKKRSARQAQQQQQNGEIREWRGTFL
QLSEIEKGLWQVEEDDSGGETRDASTTGAATQHKQQSSLPPVSPRNLSPL
EQKRALRLEMLTRMIDDFHAKHGRRRGGGGSRKQRKRSICVSAMPDSAAS
TGAPGTVHRGLTFTGGDNPAPTAAGSASSASGDGESSAPISTQVLPFHIC
VCCGTEGGLGHGRRCVHTFRRCGFCRVEEVKRVLGIQDTGRRRRRGTGTS
GSVRVSQRPLVAGDADKEEDEFEWVTDSEEEDPEFECDSCGRVIEDTADR
FHCETCDDYDLCQVCFLSHKVASEQEDGTGEIRHNASHDVTRIMGKPAVS
DRALRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ