mRNA_L-elsbetiae_contig171.4741.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A6H5J7G1_9PHAE (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G1_9PHAE) HSP 1 Score: 244 bits (623), Expect = 3.210e-69 Identity = 120/153 (78.43%), Postives = 133/153 (86.93%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLLSAAYLYRR 745 P +R+NAL CLNELVTDALALVP+CLAYMRQIKDPEVFRFCAIPQVMAIATLAE+YNNP+VFRGVVKIRKGLACRMILESG+LEGIF WFNKLA IA RVP DPCASRT +VC IA +MT P+ +A S T + ++VPVLLSAAYLYRR Sbjct: 539 PQFRENALACLNELVTDALALVPDCLAYMRQIKDPEVFRFCAIPQVMAIATLAEIYNNPDVFRGVVKIRKGLACRMILESGNLEGIFCWFNKLAEGIAARVPALDPCASRTTQVCKIAVDMTTPTGKALRTSRTKVVLYSVPVLLSAAYLYRR 691
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S2FW13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW13_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.590e-39 Identity = 74/159 (46.54%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLLSAAYLYRR*HALAG 763 P R A+ CLN +VTDAL L+PEC+ Y+ ++ + +VFRFCAIPQVMAIATL + +NN +VF GVVK+RKGLA +MI+ESG ++GI +WFN+ A +I ++ P+DP A+RT C++ ++ +R M G +L F L A+L + L G Sbjct: 46 PDGRPQAMACLNHMVTDALELIPECIKYLERLNNDQVFRFCAIPQVMAIATLDKCFNNGDVFTGVVKVRKGLAVKMIMESGTMKGIETWFNRFAMSIKAKIDPNDPSAARTAAACDVVCKLCADNRPIV-MRGPGFLPFAALTALPFAFLGKMNTKLVG 203
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S1TT08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TT08_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.190e-38 Identity = 82/164 (50.00%), Postives = 108/164 (65.85%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTA-WLAFTVPV--LLSAAYLYRR*HALAGRK 769 P + +AL CLN LVTDAL L+PECL Y+ +++PEVFRFCAIPQVMAIATL + YNNP+VF GVVKIRKG +C++IL+SG LEG+ WF +A + R+P SDP RT C E+T K A L VP+ ++ AAYL++R + G++ Sbjct: 557 PENQSSALACLNHLVTDALELIPECLDYLALLRNPEVFRFCAIPQVMAIATLTKCYNNPDVFTGVVKIRKGQSCQLILDSGSLEGVHFWFYTMASDVLRRLPGSDPSFQRTEVACRTVLELTSERYSRKKFLNLAKTLNVIVPIGAVICAAYLFQRKDSWLGQR 720
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S3UWZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWZ9_HETAK) HSP 1 Score: 155 bits (392), Expect = 1.390e-36 Identity = 73/123 (59.35%), Postives = 93/123 (75.61%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQ 655 P YR NALGCLNELVTDAL +CLAYM ++++PEVFRFCAIPQVMAIATL +VYNNP+VF GV KIRKGLA +MI+++ G+ +F+ A I RVP DP A++T EVC++ +T+ Sbjct: 829 PEYRGNALGCLNELVTDALGHAADCLAYMEKLRNPEVFRFCAIPQVMAIATLDKVYNNPDVFTGVAKIRKGLAVKMIVDTTSKSGLHHYFHSFAQRIKSRVPVEDPSATKTHEVCDLIITLTE 951
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A0M0JED5_9EUKA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JED5_9EUKA) HSP 1 Score: 152 bits (385), Expect = 7.400e-36 Identity = 72/127 (56.69%), Postives = 91/127 (71.65%), Query Frame = 2 Query: 275 QIL*PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQ 655 QI+ R L CLN LV DAL LVP+CL Y+ +K PEVFRFCAIPQVMAIATL EV++NP+VF GVVKIRKGL R++L+SG L+G++ WFN+LA IA R P +DP + L+ + +TQ Sbjct: 618 QIVGMGTRTTGLDCLNFLVADALELVPDCLTYLEMLKTPEVFRFCAIPQVMAIATLEEVFDNPKVFTGVVKIRKGLTARLLLDSGSLDGVYVWFNRLARRIASRCPKNDPSREKILKATTVIVNLTQ 744
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S2UWS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS2_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.520e-34 Identity = 72/150 (48.00%), Postives = 98/150 (65.33%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLLSAAYL 736 P +R NAL CLN LV DAL V +CL Y+ +++PEVFRFCAIPQ+MAIAT+AEVYNN +VF GVVKIRKGLA ++IL+S +EG+ WF A I +V D A +T+E C ++T + G++G + + VL + Y+ Sbjct: 607 PHFRQNALNCLNHLVLDALDHVEDCLKYLSLLRNPEVFRFCAIPQIMAIATMAEVYNNEKVFTGVVKIRKGLAAQLILDSSSIEGVHKWFYAFAQVIKAKVSEQDANAKKTVESCERIMDLTADKAKTHGVTGNKMMLVGLLVLPALGYV 756
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S2ECB1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECB1_9STRA) HSP 1 Score: 147 bits (370), Expect = 6.150e-34 Identity = 72/131 (54.96%), Postives = 96/131 (73.28%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMT--QPSREAK 673 P + +L CLNELVTDAL+LVP+CLAY+ +++ EVFRFCAIPQVMAIATL + +NNP VF GVVKIRKGL+C++IL + D +G+ + F A +IA ++ P+DP A TL+ C+ E+T Q SR K Sbjct: 541 PLAQTKSLHCLNELVTDALSLVPDCLAYLAKLRCTEVFRFCAIPQVMAIATLDKCFNNPNVFTGVVKIRKGLSCQLILHTNDAQGVHAAFRHFANSIASKINPNDPNADATLKACDAILEITAEQHSRATK 671
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S0CKG1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CKG1_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.540e-33 Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLL 721 P+ AL CLNELVTD+L LVP+CLAY+ ++ EVFRFCAIPQVM+IATL + YNNP+VF GVVKIRKGL+C++IL + D+ + F A +IA R +DP +TL+ C E R+ T + F PV++ Sbjct: 45 PANNSAALACLNELVTDSLELVPDCLAYLSALRCSEVFRFCAIPQVMSIATLDKCYNNPDVFTGVVKIRKGLSCKLILNTNDMREVQDTFITFAESIASRASKNDPSYEKTLKACETILEHCSKDRKIPPQL-TKMMNFASPVIV 188
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S4LLK3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLK3_9EUGL) HSP 1 Score: 132 bits (331), Expect = 1.350e-32 Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = 2 Query: 287 PSYRDNALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAG---AIAERVPPSDPCASRTLEV--CNIAREMTQPSREA 670 P R+ A+ CLN +V+DAL +P+CLAYM ++DP VF+FCA+PQVMA+ATLA++YNNP+VF GVVKI KGLAC+++L+ G + F + A AERV P P +R ++ CN A + + R A Sbjct: 30 PEQRERAVQCLNAMVSDALKHIPDCLAYMAMLRDPTVFQFCAVPQVMAVATLAKLYNNPDVFTGVVKISKGLACQLMLDCGSQASLLRQFGRFMSHLLAAAERVEPEGPIVARLRDLLECNAALQSDERQRGA 162
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A8J6C1C1_DIALT (Squalene synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1C1_DIALT) HSP 1 Score: 139 bits (350), Expect = 1.870e-32 Identity = 68/116 (58.62%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 305 ALGCLNELVTDALALVPECLAYMRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMT 652 AL LN LV DAL LVP+CL+YM I P++FRFCAIPQVMAIATL +VYNN +VF GVVK+RKGLA +MI+ G + GI +WF++ A I R PPSDP A RT C+ +T Sbjct: 304 ALALLNHLVCDALELVPDCLSYMTLITHPDIFRFCAIPQVMAIATLDKVYNNKDVFSGVVKVRKGLAVKMIMTCGTMGGIKAWFHEFAVEIKRRTPPSDPSAVRTYAACDRILTLT 419 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig171.4741.1 >prot_L-elsbetiae_contig171.4741.1 ID=prot_L-elsbetiae_contig171.4741.1|Name=mRNA_L-elsbetiae_contig171.4741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILback to top mRNA from alignment at L-elsbetiae_contig171:2..1929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig171.4741.1 ID=mRNA_L-elsbetiae_contig171.4741.1|Name=mRNA_L-elsbetiae_contig171.4741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1928bp|location=Sequence derived from alignment at L-elsbetiae_contig171:2..1929+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig171:2..1929+ >mRNA_L-elsbetiae_contig171.4741.1 ID=mRNA_L-elsbetiae_contig171.4741.1|Name=mRNA_L-elsbetiae_contig171.4741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig171:2..1929+ (Laminarionema elsbetiae ELsaHSoW15)back to top |