prot_L-elsbetiae_contig1709.4734.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1709.4734.1
Unique Nameprot_L-elsbetiae_contig1709.4734.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length847
Homology
BLAST of mRNA_L-elsbetiae_contig1709.4734.1 vs. uniprot
Match: D8LMZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ6_ECTSI)

HSP 1 Score: 469 bits (1206), Expect = 2.440e-147
Identity = 355/750 (47.33%), Postives = 409/750 (54.53%), Query Frame = 0
Query:   17 ARQDFKIYMSKLLEHSAALEAFRPDARCVNAGDAGRGGPAWGPPLRGLDASEEGGSPGTSL--PKETGLADEPLVPDSPSYFREE-YPWPRAGAVTSPRPRPPPNFSWVAEPSTLGVGVRDGXXXXXXXXXTGR-SLFSASAPSLAAPSEGGGRRPDEHAAASRGRH------GGEEGVGDE----WKARWSRRLLRGPVHSEYQDRFPWPPPPQQAAAPEATGANYAPLTP----------GRGRXXXXXXXXXXXXXSRGGDAREDEGVEKFGARGASEPPRDRRAAAGSLAEVPPRNGRRPSPSVDAAXXXXXXXXXXXXXXXXXVAEYANGNKTATGRYAGGRVE-------------------GTVGATPAAPAVYLAGEEWQAGKEKAPPVEDAAVESRPLSGEVLGREVADHGERGSDRRCSRVSGGREWADGREHVSGDAKWPSKAVEAGSSPVEEANAAAAAA--VGGGEAWREQAAGRGEITVVSGRQTLDCSFQQSIVTEYMDEFSWPSTLPTPGRRGKRTGMGMDHVGRLLAGKRAEEP-RRTPDPGIVARLGAAADGALRAGSPGHLSEMCRLKSPSLACRRLVLGLVVALGLSWRRWGDIRSHLLGNKSELVGFLKRFDKNRSGLTSAALRPFAEDPSLSPAHVRRVAACTVWVSRWLRVLHKYLAAREG-DLDIDLDTGLDTASPFQTPSGAACSPR--RPRQSGRCRAHGTVLDSPPPGSAPERANKSRRAAAE 717
            AR+DFKIYM KLLEHS AL+ FRPD R  +AGD G G PAWGP L     SEEGGS G +   P      D  + P SPS FREE + WPRAGAVT PRPRPPPNFSW+AEP +        XXXXXXXXX  R SL SA   S  AP+ GG R      +A  G        G EE  G+E    WKA+WSRRL RGP+HSEYQDRFPWPP        +    N AP  P          G G XXXXXXXXXXXXX                   A+  PRD     G +              VD A                     ++G +  TGR  GG +E                                                          S +  G EV  H       R S V   +EW  GR   + D  WPS+A + G S +        +A  V   E WR +A GRGE+T +SG +TLD S  QSI+TEYMDE++WPS+LP PGRRGKR+GMG+DHVGRLLAG+RAEEP R+ PDP +VARLGAAAD AL AGS GHLSEMCRLKSP LACRRL+LGLV+ALGL WRRW DIR+HLLGNK EL GFLKRF+K+R+GL S AL PF EDPSLSPA VRRVAAC VWV RWL  LH YLA +EG +LD+D      T   FQ P+ +    +  R RQS  CRAHGTV  + PP  A +     R  A E
Sbjct:    3 ARKDFKIYMDKLLEHSTALDTFRPDKRHSDAGDTGSGVPAWGPSL---GMSEEGGSVGEARGSPPAGAAVDVTMPPFSPSRFREEKHAWPRAGAVTPPRPRPPPNFSWMAEPGSPASRXXXXXXXXXXXXXXARKSLSSADLASSPAPAAGGPRIKGGRLSADLGMDDGGRSWGAEEEEGEEDADAWKAQWSRRLSRGPIHSEYQDRFPWPPRSAFLGTVDDDAFNGAPPPPHPRGRRASARGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYPRD----GGGVGGXXXXXXXXXXXXVDTAAAGRGGEGSP-----------SDGRRAGTGRLPGGDLEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSEQTSGLEVIGH----RTSRASSVYDEKEWEAGRGSEA-DGGWPSRAADVGGSSMAGGATLIGSAGDVAAAEVWRGEAVGRGEVTTMSGGRTLDFS-SQSILTEYMDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVARLGAAADRALGAGSLGHLSEMCRLKSPPLACRRLMLGLVIALGLRWRRWSDIRTHLLGNKPELQGFLKRFNKDRAGLASTALLPFVEDPSLSPAEVRRVAACMVWVPRWLHALHDYLAVKEGKELDVD------TMPMFQEPATSRSRAKLARRRQSSGCRAHGTVPGTVPPDGASKGREGRRPGAGE 722          
BLAST of mRNA_L-elsbetiae_contig1709.4734.1 vs. uniprot
Match: A0A835YVY6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.740e-5
Identity = 68/233 (29.18%), Postives = 93/233 (39.91%), Query Frame = 0
Query:  455 QAAGRGEITVVSGRQTLDCSFQQSIVTEYMDEFSWPSTLPTPGRRGKRTGMGMDHVGRLLAGKRAEEPRRTPDPGIVARLGAAA---DGALRAGSPGHLSEMCRLKSPSLACRRLVLGLVVALGLSWR-RWGDIRSHLLGNKSELVGFLKRFDKNRSGLTSAALRPFAEDPSLSPAHVRRVAACTVWVSRWLRVLHKYLAAREGDLDIDLDTGLDTASPFQTPSGAACSPRRP 683
            Q A R +     GR   D   Q+S +     E +  ++ P  G  G+R     D VG LL  +    P          +LGA A   D A  A     L+ +C L  P  A R LV G+V  L    R RW ++R+H+L N       L  F+K+   +T AAL  F       P  +  +A     ++ WL+ LH Y A + G            A P   P  AA  P  P
Sbjct:  310 QRAARAKRHGTDGRPLHDGGPQRSAMYTAQGERACATSCPG-GAHGERE---EDSVGALLHARARLPPXXXXX--XXTQLGAFAASVDRAQAAVKGRDLAVLCALPRPPAAVRALVHGVVSLLAPHVRMRWEELRTHVLRNGYNFARLLDGFNKDAPAVTPAALA-FTTQRWAQPDFISGIATAARGLATWLQALHAYAAYKAGPT---------AALPLPPPMRAAPQPLTP 526          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1709.4734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMZ6_ECTSI2.440e-14747.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVY6_9STRA1.740e-529.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1709contigL-elsbetiae_contig1709:324..9461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1709.4734.1mRNA_L-elsbetiae_contig1709.4734.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1709 324..9566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1709.4734.1 ID=prot_L-elsbetiae_contig1709.4734.1|Name=mRNA_L-elsbetiae_contig1709.4734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=847bp
MLTGRAGCSQPQSIEQARQDFKIYMSKLLEHSAALEAFRPDARCVNAGDA
GRGGPAWGPPLRGLDASEEGGSPGTSLPKETGLADEPLVPDSPSYFREEY
PWPRAGAVTSPRPRPPPNFSWVAEPSTLGVGVRDGGGGGGGGGATGRSLF
SASAPSLAAPSEGGGRRPDEHAAASRGRHGGEEGVGDEWKARWSRRLLRG
PVHSEYQDRFPWPPPPQQAAAPEATGANYAPLTPGRGRGRGRGRGVGSSG
GSRGGDAREDEGVEKFGARGASEPPRDRRAAAGSLAEVPPRNGRRPSPSV
DAAAAAQYDGGGGGSGGGGGVAEYANGNKTATGRYAGGRVEGTVGATPAA
PAVYLAGEEWQAGKEKAPPVEDAAVESRPLSGEVLGREVADHGERGSDRR
CSRVSGGREWADGREHVSGDAKWPSKAVEAGSSPVEEANAAAAAAVGGGE
AWREQAAGRGEITVVSGRQTLDCSFQQSIVTEYMDEFSWPSTLPTPGRRG
KRTGMGMDHVGRLLAGKRAEEPRRTPDPGIVARLGAAADGALRAGSPGHL
SEMCRLKSPSLACRRLVLGLVVALGLSWRRWGDIRSHLLGNKSELVGFLK
RFDKNRSGLTSAALRPFAEDPSLSPAHVRRVAACTVWVSRWLRVLHKYLA
AREGDLDIDLDTGLDTASPFQTPSGAACSPRRPRQSGRCRAHGTVLDSPP
PGSAPERANKSRRAAAERQGRPGAAAAAAAAAAAAAPVAPLERRHAAIDD
NDNDGNGDGEESRDTRTEDRRPPLSRAAATRGGGSTCPLLSTTARGDAEG
GGGRRRCGGAGGGGEAAGASFAGSSGGGGGLDSESQWTAGTVTSRG*
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