mRNA_L-elsbetiae_contig1708.4730.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1708.4730.1
Unique NamemRNA_L-elsbetiae_contig1708.4730.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 9.330e-91
Identity = 136/206 (66.02%), Postives = 160/206 (77.67%), Query Frame = 2 
Query:    2 LSITEYVELTKDQHDPQYKAAFQRLDGKQKTLGWHGFKLLHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEGNVHIFADPSPVQSF 619
            LSI EY EL+    DP+Y+  FQR   +    GWHGFKLLHNPLCAEFGIRT  EL  FIR  L  FAMVLLTE FEEGLAVFMRMFNWRPIDMT+ +V++TKAGV RYDG  L +VPK  DLP EVL +I++ T+LD+ALYKAAV++YL+KR  Y+  L+ DV+ IR VQSAVHGYL F+A SPAH+WYEG+V  FA+PSPVQ F
Sbjct:  140 LSIAEYFELSAKPGDPRYRGVFQRR--RAGKAGWHGFKLLHNPLCAEFGIRTATELESFIRDDLQGFAMVLLTEHFEEGLAVFMRMFNWRPIDMTFCRVIETKAGVSRYDGKKLTNVPKTRDLPPEVLAQIKQQTQLDQALYKAAVKVYLQKRAEYQDSLEVDVRSIRTVQSAVHGYLEFNAKSPAHKWYEGDVKCFANPSPVQPF 343
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 4.980e-46
Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 2 
Query:  113 KLLHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEGNVHIFADPSPVQSF 619
            KLL+NPL AEFGI    +++ FI+  +P+F MVLLTERF+EGLA+  RM  W PIDMTY K++QTK G  R+DG  L +VPKISDL  E+L+ I+  T+LD  LY+A   +Y + ++ +  G+DE  Q  + VQ  +H YL  +  S A +WY G+V I+ D  P+ +F
Sbjct:  293 KLLYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTYCKMLQTKKGEMRWDGKPLENVPKISDLAPEILSHIKARTQLDSRLYQAGTLLYRKYKLEFGPGVDEHFQAFQGVQKVMHRYLEMNTSSDALKWYVGDVDIYDDAPPILAF 461
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 1.630e-36
Identity = 69/158 (43.67%), Postives = 99/158 (62.66%), Query Frame = 2 
Query:  119 LHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEGNVHIF 592
            L NPLCAEFGI  G++L +FI   LP+F +VLLTE F+EGL +  R+  W  IDMTYS++++TKAG  R+DG  L +VP   DLP  V   +  NT LD+ LY AAV  Y + +      +++D+++   +Q  V+GYL  ++ S A  WY G+   +
Sbjct:  176 LTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGARWDGKELKNVPHWEDLPTWVQDRVDANTALDKMLYDAAVSHYNKMKAVAAMEIEDDLKEFDELQKTVNGYLALNSSSEAIRWYSGSAQPY 333
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 2.570e-36
Identity = 70/158 (44.30%), Postives = 100/158 (63.29%), Query Frame = 2 
Query:  119 LHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEGNVHIF 592
            L NPLCAEFGI  G++L +FI   LP+F +VLLTE F+EGL +  R+  W  IDMTYS++++TKAG  R+DG  L +VP+  DLP  V   +  NT LD+ LY AAV  Y + +      +++D++Q   +Q  V+GYL  ++ S A  WY G+   +
Sbjct:  365 LTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGTRWDGKELKNVPRWEDLPTWVQDRVDANTALDKMLYDAAVRHYNQMKAVAAIEIEDDLKQFEELQKVVNGYLALNSSSEAIRWYSGSAQPY 522
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.260e-25
Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 2 
Query:  119 LHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEGNVHIFADPSPVQSF 619
            L NPL AEFG++T KE++ FI   LP+F +V+LTER +E L +   +  W  ID+TY+ +  T+AG +RYDG  L D P    L +EV   I   T LD+ALY A  + + ++          ++   + +Q  V  YL  ++   A E Y     ++ DP P   F
Sbjct:  193 LRNPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTYASLNATRAGARRYDGKPLIDRPDFCHLSEEVQARIDELTILDQALYDAGKKEFEKRLSSTSTSFQAELAGFQELQDNVCTYLEGNSSGLAREMYRSMDAVYTDPPPAYHF 359
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: A0A6G6CDJ0_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDJ0_SACJA)

HSP 1 Score: 110 bits (274), Expect = 2.840e-24
Identity = 63/176 (35.80%), Postives = 94/176 (53.41%), Query Frame = 2 
Query:   77 DGKQKTLGWHGFKLLHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEG-NVHIFADP 601
            D   K+ G   F LL NPL +E G+ T   + +        F M+LLT+RF+EGL V  R+  W  IDMTY  + +TKAG      + + D P   DLP++V  +I   T LD+ +Y AA  +Y ++  P    +  DV++ + +Q  V GYL+ +  S A+  Y   +V+I A P
Sbjct:  249 DFLMKSHGGDDFALLKNPLASEVGVTTFHNMEQLFVNDFSSFRMILLTDRFDEGLMVLRRLLGWSMIDMTYMAMDETKAG-----DIAVVDRPSFHDLPEKVRNKIDSLTELDQMVYSAAQVLYDKRLRPMSDVIGADVEEFQKLQKVVSGYLDANQSSKANAMYRAEDVYIGAPP 419
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: D8LRU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU7_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 5.930e-24
Identity = 58/163 (35.58%), Postives = 88/163 (53.99%), Query Frame = 2 
Query:  113 KLLHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEGNVHIFADP 601
            KLL+NPL AEFG+RT ++L   I   LP+F ++LLTER EEGL V  RM +W  ID+TY  + +TKAG +R+DG      P    LP + L                          PY   ++ED+ + + +QSA+  YL  ++ S A+  Y  +++++ +P
Sbjct:  189 KLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPSKRLA-------------------------PYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMYR-SMNVYKEP 325
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: A0A6H5JMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW5_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.280e-21
Identity = 59/163 (36.20%), Postives = 87/163 (53.37%), Query Frame = 2 
Query:  134 CAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVPKISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIRAVQSAVHGYLNFDAMSPAHEWYEGNVHIF-ADPSPVQSF 619
            C EFG+ T  EL +FI   +PEF +VL+TERF+E L V   +  W  +DMTY  V ++     ++ G+    VP    LP++V  +I   T LDR LY A V  + E   P+   +D D++  R +Q+ V+ YL  +  SPA   Y     ++  DP P+  F
Sbjct:  297 CKEFGVATETELEDFIDQEIPEFKLVLVTERFDESLMVMRSLLGWDLVDMTYVSVNRSSGRKGKF-GVSKERVP-FDHLPEDVQEKIDELTTLDRRLYDAGVAAFEESLAPFTAQVDADLEGFRELQTVVNEYLRDNPSSPAQALYSYKTAVYYEDPPPMLDF 457
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: D7FJM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM5_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 9.320e-11
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 2 
Query:  119 LHNPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKV 298
            L NPL AEFG++T KE++ FI   LP+F +V+LTER +E L +   +  W  ID+TY+ +
Sbjct:   14 LRNPLSAEFGVKTTKEMNTFIENHLPDFKLVMLTERMDESLMILRSLLGWHMIDVTYASL 73
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BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Match: A0A7S2SD55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD55_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.440e-9
Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 2 
Query:  125 NPLCAEFGIRTGKELHEFIRVGLPEFAMVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTK--AGVQR-YDGLVLADVPKISDLPQEVLTEIRRNT-RLDRALYKAAVEIYLEKRVPYEHG----LDEDVQQIRAVQS 517
            +P+    GI   +++       L +F +VLLTERF+EGL + M +  W  +D+TY +   +   AG++R +DGL +   PK S L   VL +I R T +LD  LY  A+  Y  + V +       L  D++ +  +QS
Sbjct:  162 SPMAHAMGIYNKEQVGTL----LAKFDLVLLTERFDEGLVLLMHLLKWTVVDLTYLRAHDSHHIAGLRRSWDGLDVPPSPKPSALAPHVLAQIHRLTDKLDGVLYNQALVKYTSRLVAFHRSNPGVLQRDLEDLHRLQS 296
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1708.4730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LK91_ECTSI9.330e-9166.02Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
D7FX25_ECTSI4.980e-4647.93Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7FI84_ECTSI1.630e-3643.67Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JL02_9PHAE2.570e-3644.30ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6H5L8E6_9PHAE1.260e-2535.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G6CDJ0_SACJA2.840e-2435.80Sulfotransferase n=1 Tax=Saccharina japonica TaxID... [more]
D8LRU7_ECTSI5.930e-2435.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMW5_9PHAE2.280e-2136.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJM5_ECTSI9.320e-1146.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SD55_9STRA1.440e-933.09Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1708contigL-elsbetiae_contig1708:2376..6455 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score202.6
Seed ortholog evalue1.2e-49
Seed eggNOG ortholog2880.D8LK91
Preferred nameGAL3ST3
KEGG rclassRC00007,RC00231
KEGG koko:K01019,ko:K09676
KEGG ReactionR04017,R05105,R10805
KEGG Pathwayko00565,ko00600,ko01100,map00565,map00600,map01100
KEGG ModuleM00067
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005975,GO:0005976,GO:0005996,GO:0006022,GO:0006029,GO:0006790,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009311,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016782,GO:0017076,GO:0019538,GO:0030166,GO:0030246,GO:0030309,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044425,GO:0050656,GO:0050694,GO:0050698,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681
EggNOG free text desc.galactosylceramide sulfotransferase activity
EggNOG OGs2CM97@1,2QPNT@2759
EC2.8.2.11
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons6
Model size763
Cds size417
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1708.4730.1prot_L-elsbetiae_contig1708.4730.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1708 2517..6250 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815711.303162-UTR-L-elsbetiae_contig1708:2375..25161622815711.303162-UTR-L-elsbetiae_contig1708:2375..2516Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1708 2376..2516 -
1691683052.965358-UTR-L-elsbetiae_contig1708:2375..25161691683052.965358-UTR-L-elsbetiae_contig1708:2375..2516Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1708 2376..2516 -
1622815711.3741326-UTR-L-elsbetiae_contig1708:6250..64551622815711.3741326-UTR-L-elsbetiae_contig1708:6250..6455Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1708 6251..6455 -
1691683053.030105-UTR-L-elsbetiae_contig1708:6250..64551691683053.030105-UTR-L-elsbetiae_contig1708:6250..6455Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1708 6251..6455 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815711.3141468-CDS-L-elsbetiae_contig1708:2516..25711622815711.3141468-CDS-L-elsbetiae_contig1708:2516..2571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 2517..2571 -
1691683052.9789114-CDS-L-elsbetiae_contig1708:2516..25711691683052.9789114-CDS-L-elsbetiae_contig1708:2516..2571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 2517..2571 -
1622815711.3247805-CDS-L-elsbetiae_contig1708:3338..34511622815711.3247805-CDS-L-elsbetiae_contig1708:3338..3451Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 3339..3451 -
1691683052.990391-CDS-L-elsbetiae_contig1708:3338..34511691683052.990391-CDS-L-elsbetiae_contig1708:3338..3451Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 3339..3451 -
1622815711.3346183-CDS-L-elsbetiae_contig1708:3818..38931622815711.3346183-CDS-L-elsbetiae_contig1708:3818..3893Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 3819..3893 -
1691683052.9989898-CDS-L-elsbetiae_contig1708:3818..38931691683052.9989898-CDS-L-elsbetiae_contig1708:3818..3893Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 3819..3893 -
1622815711.3439276-CDS-L-elsbetiae_contig1708:4442..45271622815711.3439276-CDS-L-elsbetiae_contig1708:4442..4527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 4443..4527 -
1691683053.0068424-CDS-L-elsbetiae_contig1708:4442..45271691683053.0068424-CDS-L-elsbetiae_contig1708:4442..4527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 4443..4527 -
1622815711.355315-CDS-L-elsbetiae_contig1708:5788..58741622815711.355315-CDS-L-elsbetiae_contig1708:5788..5874Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 5789..5874 -
1691683053.0144675-CDS-L-elsbetiae_contig1708:5788..58741691683053.0144675-CDS-L-elsbetiae_contig1708:5788..5874Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 5789..5874 -
1622815711.364735-CDS-L-elsbetiae_contig1708:6247..62501622815711.364735-CDS-L-elsbetiae_contig1708:6247..6250Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 6248..6250 -
1691683053.0221019-CDS-L-elsbetiae_contig1708:6247..62501691683053.0221019-CDS-L-elsbetiae_contig1708:6247..6250Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1708 6248..6250 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1708.4730.1

>prot_L-elsbetiae_contig1708.4730.1 ID=prot_L-elsbetiae_contig1708.4730.1|Name=mRNA_L-elsbetiae_contig1708.4730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
MVLLTERFEEGLAVFMRMFNWRPIDMTYSKVVQTKAGVQRYDGLVLADVP
KISDLPQEVLTEIRRNTRLDRALYKAAVEIYLEKRVPYEHGLDEDVQQIR
AVQSAVHGYLNFDAMSPAHEWYEGNVHIFADPSPVQSF*
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mRNA from alignment at L-elsbetiae_contig1708:2376..6455-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1708.4730.1 ID=mRNA_L-elsbetiae_contig1708.4730.1|Name=mRNA_L-elsbetiae_contig1708.4730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4080bp|location=Sequence derived from alignment at L-elsbetiae_contig1708:2376..6455- (Laminarionema elsbetiae ELsaHSoW15)
GCTTTCGATCACCGAGTACGTGGAGCTGACAAAAGATCAACATGACCCAC
AGTACAAGGCCGCCTTCCAAAGGCTGGACGGCAAGCAGAAAACGCTCGGG
TGGCACGGCTTCAAGCTGCTGCACAACCCCCTCTGCGCCGAGTTCGGCAT
CCGAACAGGCAAAGAGCTGCACGAGTTCATCCGAGTCGGCCTCCCAGAAT
TTGCCATGGTAAGAGAGAGAGAGAGCGAAAGAGCGAAAAGAGCAGATACA
TTGAAAAAGCTCCGTGAATCACACTACTTCCGCCGTTCGGCACGGACCGG
CAAAGCCCGAGCACCCCGAAGCCTTGAAGGGGGGTATGCCGCCGTGCGTA
TGGATGACTCTCTTCGGGAGTGCGCCAACCTTTTTGTCTGCCTCGAGCGT
GCTGAGGGGGGGGGGGGGATGTCTTCGTCTCCGCAAAGGTAACATGCGTT
CCCTATGTATCAAACCAGAGGGAAAAAGTTGAGCACTACATATAGATGCA
CATTCATTATCTCTCACCCACTGGTGCATCCCACGTTGATCTCTTCCGTC
CTCCGCCGGCCGGTCGTCTTCCTTCTTGCAGGTTCTTCTGACCGAACGGT
TCGAAGAAGGGCTGGCGGTATTTATGCGCATGTTCAACTGGAGACCGATC
GACATGACGTACAGCAAGTGAGTATGCGTTGCCGACTGCAAGCAAGCTGC
GCCTTGCTTCTGCTGTTCAAAGCGCCTGTGTATGCACGGAAGTACCCGTC
TTTGCAATTTCGATGCAGAGGCCTGTTCTTGGAGGACTGTAGCTATTTAT
GCGAGACATGCAGACCTGTCGCAGCACCGACCAATCATATTTTCAGCTTG
ATTAAGGCTGAACCGCGCTTCCCAGCTTTGAAATCCCGGGTAGGGATTCC
AGGAGAGAGCCCGAAGCGACACTTGTTTGTTTATGGTGGTGTTTTTCTGT
CTTCTCCCACAACAAATGTCGTGGATCTCTCTCCAGCTGCCCTACCTCAC
CGTAAGATTGATTTTTGCGCTTTGAAACAAGAACCGATACCAAAATGCCT
CCGTCAATACTTGGGGTTGGTAGCTCTTACTGTAGGTAGCAGGGCAGAGA
GCAATATTCGGTGCGCGGTGGACTGAACCAATGCATCTACGCACCAACCA
AACTACATTATTCGTGTGTCGGCGAAAGTGAGGGCTGCACGCTTGGGGTA
GATAGACAGCAGCGAAGGTCGGCCATGGAGCGCTCCGGATCTTTGGAGAC
AAGGTCTTCGGCTGAGCACCCCTCAAAACACACTTGGAGGAATATAGTCA
GAGCACAACAGGAGCGGTGCACAGCAGCTTTCGATCTGAAGAGCTTTTGT
GTTTTCAACCCGTCTCAAAACGCCCAATTCTCTGCCAGCCTGGTCGGGAT
TTGGTGAACAAAGTCACACACGCCCTGCGAACGAGCCAAAGCAGCAGACA
CACGCGAAGATAGCCAGGATTCTTCCGTTCAAGAAAACAGGACTCAAGAC
AGTCGAACCCGTAGAAATTGCGGTGCCAAACACGAAGTTCGTATTATTAT
TGTACTGAATTCAAAGAAGAATTAAAAACCAGCAGTCCACTGCCAGAACT
TCAAGTACGTGTTTTCCACCCTTAAGCTCTCGCCTTTCCTAGGATGGTAT
CCGCTGCTGGCAGCCCTCCCGGGGTCCTCGTATTCTCGAAAAGGCGCTCT
TCCACCACGATGCGACCGAACACTTCTGACTGTGTGGCTATTCTGACGCA
GTTGCTGACTGAATTTTCAGCATCATACGTATATCTAGGCAGAAGGATTC
CAAACAAGCGTATGTTCGTCGCCCTTGCGACCCAACTTTCTCTCGCGAGA
TCGCCCGTTCACATACTCAGTAAATTTTCCGCCTTTCTCTCCTTTTCCCC
CTTCGACGCACATCTGCTCGTCGTTCAGGGTGGTTCAGACAAAGGCAGGG
GTACAACGCTACGACGGCTTGGTATTGGCCGATGTCCCGAAGATTTCCGA
CCTCCCACAAGAGGTGAGTACCTAGGTTCTGCCGGGATATCCGGCGTGAT
AGGTACCTTACACGTTCACCGAACTCGCCGAAACCCCATGCTAAAAATGA
GGCGTGTTTTCGTGAAATGCTGGCACACGTCCGAGGCTAGACTCGCCGCC
ACTCTTACATATAACCTGGCCGGAAACCCTTTTTTGACTTTGTCGTGTGC
GTGTACCAGCGCACGCACATTGACGTACTTGTTTCCCCAAACCCGATGCC
TGTGTGGCGCCCCCTCCAGACACTCGTGCTTCCTCGGTCACACACAGTAA
GCTCGAATGGCGGAAGCTATGGTTGACCTCCCACTAAAGAGCAGAGATAC
TGCTGTATCTTTATCCGGAAACTCGTGGCTCGCTTAAAATACCCAACCGG
CGACACGTTAGGAGACTTTACGTTCTCGTAGCGCGATGTTGATTACACTC
CTCACCACAACTGCTGCCTGCTCTCTGTTATGTTGCGGGTGGGGCTCGAG
AGCAGACCCTAAAACCTTTTCACTAAAAAGCACCCGCTCCTCGCCCATGA
AAACGAAATCAGGTGTTGACCGAGATAAGGCGGAACACTCGGCTGGACCG
AGCCCTCTACAAGGCCGCGGTCGAGATCTACCTCGAGGTACGTGAACGAG
CCTAAGGGGCAGGGGGTGGGAGGAAGAGCGTCTGACCCGAACACTTACAG
CTACTTCTTGCGCCACGAGGTCGGCCATATGTTGTCAGTTATGCCGCACG
GAGCGTCCCGCTGCCCGTTGATCAGTCATACTATGTGACCCCGGTTGGGT
CGTATGGCTAGAGTAGAAGTGGAGGATGGGGGCCAGAGGGGCAGACGACA
AAATCCAATAATGGGCAGACAATAAAAAAAAAAAACTTCTATGCAGGGAA
GGGGAACAGGCTTTGTTTGACCGCGTTGGCCGGTGTAAACGTCACCCACC
CTCATTCCCGCCCTGGCCCGCGATCGATCCCCGTTTCCTCCCGGATGGAC
ACAGAAACGTGTTCCGTACGAGCATGGGCTGGATGAAGACGTGCAGCAAA
TTCGGGCGGTGCAGAGTGCGGTGCACGGATATCTCAACTTCGACGCCATG
AGTCCGGCCCACGAGTGGTGAGAATAGGGGAAGAGATGCAACGCAATGAT
GGTGCCCAGAAGATTCAAGTTTTTAATCATTTTTTCGTGTGGATACCGAG
GTATTTACCAAGCTCGGCCAAGGGTCCGAGTAAATCTGGGGTAAAAAATT
CAGAGGGTTGTATTCCGTTACATATATCTAGTCTGATACATAGTGGCAGA
CGCTGCGGCCGCAGATACGCAAAGACACACAATGTGGTACATCCGTGCGT
GCGTGATGTGGGCGGTGGGCGTCTATTGTAGCCACAGCGCACAGAAAAAC
ATCTGGGATGGGGATGGGGACAGCGTAGAGCGCATCAAGGTGCAGGGCAC
AGCAGGAGTCAGCATAGATTGGGTGGTGCTCGCGCGGAACGGGCAACACG
TGTTCGCACGAAATGAGCCGAAGATCTCGCCTCCTCTCTGCTCTTGGGGG
CTGCCGCTGCTTTCATAGGCAGTCGACATCTCTGGTGTGAACATGATTGC
TTCCTGCTCAGGGGTTCTGCTCTTTTCCACGAGCCCCGGCTACTCCCGTC
CGGTTGGCCCTTGCTCTTGGTTGTTGTTTCGAGAGTCGTGGCCGCGAAGC
CCTTGGACGAAAGATGGACGGACATTTTTTCCATCCTGTTTCTTGGCGAA
CGACTAGAGTCGAGTGAGTAAGTAGCCCGAATGAATGAATGCACGTAACA
CTCATGACGTCCCCGTCACTACTACCCTTCCTCGTATGTAATATTCCTTG
CTGTCGATCGTTGGCTGCTTGTGGACGGCCGCAGGTACGAGGGCAACGTG
CATATCTTCGCGGATCCTTCGCCGGTGCAGTCTTTCTGAGGAACCATCAT
TTCCCGGCAGGCTGGTACCGCACCTCTCTTCTTCTTTCCGTTGCGTTTGT
TTTGCGGCAATGCCCTGGGGGGGTGGCTCCCTATTGCCATTCATTACTGC
GGCGTGCTTTTTCGAGGAGACTGCGGCAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1708:2376..6455-

>mRNA_L-elsbetiae_contig1708.4730.1 ID=mRNA_L-elsbetiae_contig1708.4730.1|Name=mRNA_L-elsbetiae_contig1708.4730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig1708:2376..6455- (Laminarionema elsbetiae ELsaHSoW15)
ATGATGGTTCTTCTGACCGAACGGTTCGAAGAAGGGCTGGCGGTATTTAT
GCGCATGTTCAACTGGAGACCGATCGACATGACGTACAGCAAGTTCTTCT
GACCGAACGGTTCGAAGAAGGGCTGGCGGTATTTATGCGCATGTTCAACT
GGAGACCGATCGACATGACGTACAGCAAGGTGGTTCAGACAAAGGCAGGG
GTACAACGCTACGACGGCTTGGTATTGGCCGATGTCCCGAAGATTTCCGA
CCTCCCACAAGAGGGTGGTTCAGACAAAGGCAGGGGTACAACGCTACGAC
GGCTTGGTATTGGCCGATGTCCCGAAGATTTCCGACCTCCCACAAGAGGT
GTTGACCGAGATAAGGCGGAACACTCGGCTGGACCGAGCCCTCTACAAGG
CCGCGGTCGAGATCTACCTCGAGGTGTTGACCGAGATAAGGCGGAACACT
CGGCTGGACCGAGCCCTCTACAAGGCCGCGGTCGAGATCTACCTCGAGAA
ACGTGTTCCGTACGAGCATGGGCTGGATGAAGACGTGCAGCAAATTCGGG
CGGTGCAGAGTGCGGTGCACGGATATCTCAACTTCGACGCCATGAGTCCG
GCCCACGAGTGAAACGTGTTCCGTACGAGCATGGGCTGGATGAAGACGTG
CAGCAAATTCGGGCGGTGCAGAGTGCGGTGCACGGATATCTCAACTTCGA
CGCCATGAGTCCGGCCCACGAGTGGTACGAGGGCAACGTGCATATCTTCG
CGGATCCTTCGCCGGTGCAGTCTTTCTGAGTACGAGGGCAACGTGCATAT
CTTCGCGGATCCTTCGCCGGTGCAGTCTTTCTGA
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