mRNA_L-elsbetiae_contig1707.4729.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1707.4729.1
Unique NamemRNA_L-elsbetiae_contig1707.4729.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: D8LFV9_ECTSI (Calcium homeostasis endoplasmic reticulum protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV9_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 1.030e-128
Identity = 208/257 (80.93%), Postives = 222/257 (86.38%), Query Frame = 2
Query:  260 MPVCHVPYPWRGALYPVMGKAQS----DASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILKVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLKQVDEQRQKDKEQRRGXXXRRLAGNEGSSGGXXXXXXXQRDRDRG--RSSQPQGLRAKQAQLEIESDMQGRDKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGGGEGAVKKKT-AAEQDAFEAYRRNKSYSFRRF 1009
            MP CHV YPWRGALYPVMGKAQS    +ASKFPVAAGLASTAHGTDNMLEKLPVGTMAGIL+VSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATL+QV E+R+K+K     XXX  LAG EG           +R+RD G       QGLRAKQAQLE+ESDMQGR+KVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDK+GIGGG+G++KKKT AAEQDAFEAYRRNKSYSFRRF
Sbjct:    1 MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERKKEKXXXXXXXXXXLAGKEGGXXXSGQNDRGRRNRDEGFGAGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKSGIGGGDGSIKKKTDAAEQDAFEAYRRNKSYSFRRF 257          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: A0A6H5J830_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J830_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 1.280e-125
Identity = 224/285 (78.60%), Postives = 236/285 (82.81%), Query Frame = 2
Query:  182 EAKGTAVLPLAVAVQAVPSLAPAPETMPVCHVPYPWRGALYPVMGKAQS----DASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILKVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLKQVDEQRQKDKEQRRGXXXRRLAGNEGSSGGXXXXXXXQRDRDRGRS--SQPQGLRAKQAQLEIESDMQGRDKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQ--MDKAGIGGGEGAVKKKTAA-EQDAFEAYRRNKSYSFRRF 1009
            EAK    LPLAV VQAVP+LAPAPETMP CHV YPWRGALYPVMGKAQS    +ASKFPVAAGLASTAHGTDNMLEKLPVGTMAGIL+VSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATL+QV E+R         XXX            XX     +R+RD G       QGLRAKQAQLE+ESDMQGR+KVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQ  MDK+GIGGG+G+VKKKTAA EQDAFEAYRRNKSYSFRRF
Sbjct:  405 EAKAGVGLPLAVVVQAVPTLAPAPETMPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXXQNDRGRRNRDDGFGVGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTAAAEQDAFEAYRRNKSYSFRRF 689          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: A0A835YPB1_9STRA (Calcium homeostasis endoplasmic reticulum protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.090e-28
Identity = 91/246 (36.99%), Postives = 121/246 (49.19%), Query Frame = 2
Query:  284 PWRGALYPVMGKAQSDASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILKVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLKQVDEQRQKDKEQRRGXXXRRLAGNEGSSGGXXXXXXXQRDRDRG--RSSQPQGLRAKQAQLEIESDMQGRDKV-LGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIG-----GGEGAVKKKTAAEQDAFEAYRRNKSYS 997
            PW     P +G   S  S FPVAAG+A   HG D  ++ + VG M  +++ +LR G + Y P++   +P    PHIEPGRL+VR+D+FY R TL+    +R         XXX       G            R+RDRG  R  +  G R            Q   +  + EEN+G   LKKMGW EG GLG    G+ EP+ G GQMD+ GIG     GG G         +D +E YR+ KSY+
Sbjct:    5 PWGAPHTPPVGAPASVQSLFPVAAGMAP--HGQD--IDNMQVGIMVALVRAALRGGAKPYAPINAAAMPPAKPPHIEPGRLEVRLDDFYRRLTLEDDKRERXXXXXXXXXXXXXXXXXXRGRGDYQHNRRSDSRERDRGGYRERRDWGDRGGGRGGGYRPPPQAMPETQISEENVGFQALKKMGWQEGAGLGVGGKGIAEPVKGGGQMDRGGIGVKPPSGGGGGP-------EDMYEQYRKAKSYN 239          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: A0A7S3JU05_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU05_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.140e-14
Identity = 64/202 (31.68%), Postives = 94/202 (46.53%), Query Frame = 2
Query:  392 LEKLPVGTMAGILKVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLKQVDEQRQKDK--EQRRGXXXRRLAGNEGSSGGXXXXXXXQRDRDRGRSSQPQGLRAKQAQLEIESDMQGRDKV----LGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGGGEGAVKKKTAAEQDAFEAYR 979
            L  +PVG MA +L  +L  G   +KP+D   +P++  P IE  +L+ R+  FY    LK+  +++  D   +Q++    RR  G                         P+  R +  Q EI + M    K     +G+EN+G  +L+ MGW EGTGLGS  +G  EPI+ +GQ D  GIG       +   A  D F  YR
Sbjct:   31 LASVPVGIMADVLSTALAAGHEPWKPLDTSKIPQFNPPIIESNQLEERIANFYRTVDLKRGHKRKADDHTIQQQQAPPQRRKYG-------------------------PKIDRFELLQREI-APMIPHKKTNINGIGDENVGKQMLRGMGWQEGTGLGSQGTGRAEPIADAGQSDTVGIGS------RPPGANSDVFSQYR 200          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: A0A8J2STI1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STI1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.130e-13
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 2
Query:  392 LEKLPVGTMAGILKVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLKQVDEQRQKDKEQRRGXXXRRLAGNEGSSGGXXXXXXXQRDRDRGRSSQPQGLRAKQAQLEIESDMQGRDKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGGGEGAVKKKTAAEQDAFEAYRRNKSYSFR 1003
            L  +PVG MAG++KV+L  G   ++P+D+  +P      +EPGRL+ RV EFY            +KDK +R  XXX            XXXXXXX     R       G   ++   E  +  QG D  +G +N+GH +L++MGW EG GLG+  +G+ EPI    Q    G+G G+     +    +D F  YR  +S  +R
Sbjct:  162 LSTIPVGVMAGLVKVALNGGHEPWRPLDLTTMPTAAPMPVEPGRLEARVKEFYRLL---------EKDKLRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYEQLDSGYSTRRVD-EDATRRQGLDAAIGADNMGHQMLQQMGWREG-GLGARGTGIAEPIDVRQQQSNQGVGAGQ-----QQQQPEDEFSQYRTQRSSQYR 349          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: A0A397GXL9_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GXL9_9GLOM)

HSP 1 Score: 64.7 bits (156), Expect = 1.060e-7
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  773 DKVLGEENIGHNLLKKMGWS-EGTGLGSSRSGMVEPISGS----GQMDKAGIGGGEGAVKKKTAAEQDAFEAYRRNKSYSFRR 1006
            DK++ ++N+G  +LKK+GW   GTGLGSS +G+ EPI G     G++   G+G G+G        E+D F+ YR+ KSY+++R
Sbjct:  663 DKMISDQNVGFQMLKKLGWEGAGTGLGSSSTGIAEPIKGGELRLGELKYLGVGHGQGD-------EEDIFDQYRKAKSYTYQR 738          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: UPI001884D5D3 (LOW QUALITY PROTEIN: SURP and G-patch domain-containing protein 1-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884D5D3)

HSP 1 Score: 61.6 bits (148), Expect = 2.220e-7
Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 2
Query:  770 RDKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGGGEGAVKKKTAAEQDAFEAYRRNK--SYSFR 1003
            R+  + E+N+G  +LKKMGW+EG GLGS  SG+  PIS    +D AG+G    A   K   E D FEAYR+    +Y FR
Sbjct:  139 REFRIKEDNMGFQMLKKMGWTEGXGLGSDGSGITAPISQKRTLDPAGVGASSQADVSK---EDDEFEAYRKRMMLAYKFR 215          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: H9F9W1_MACMU (Calcium homeostasis endoplasmic reticulum protein (Fragment) n=2 Tax=Cercopithecidae TaxID=9527 RepID=H9F9W1_MACMU)

HSP 1 Score: 60.8 bits (146), Expect = 2.470e-7
Identity = 37/76 (48.68%), Postives = 42/76 (55.26%), Query Frame = 2
Query:  773 DKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGGGEGAVKKKTAAEQDAFEAYRRNKSYSF 1000
            D  LGEEN GH +L KMGWS   GLG+   G+ +PI G    DK     G G       A  D +E YRRNKSYSF
Sbjct:  112 DSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGV------ALDDPYENYRRNKSYSF 181          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: UPI001884F864 (SURP and G-patch domain-containing protein 1-like n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884F864)

HSP 1 Score: 62.4 bits (150), Expect = 3.570e-7
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  770 RDKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGGGEGAVKKKTAAEQDAFEAYRRNK--SYSFR 1003
            R+  + E+N+G  +LKKMGW+EG+GLGS  SG+  PIS    +D AG+G    A   K   E D FEAYR+    +Y FR
Sbjct:  284 REFRIKEDNMGFQMLKKMGWTEGSGLGSDGSGITAPISQKRTLDPAGVGASSQADVSK---EDDEFEAYRKRMMLAYKFR 360          
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Match: A0A0K2TGR8_LEPSM (Calcium homeostasis endoplasmic reticulum proteinlike [Bombyx mori] n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TGR8_LEPSM)

HSP 1 Score: 62.4 bits (150), Expect = 5.970e-7
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 2
Query:  779 VLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGGGEGAVKKKTAAEQDAFEAYRRNKSYSF 1000
            V+   N GH ++++MGW  GTGLGSS SG+VEPISG    D+  +  G G       +  D FEA+R+NK+ S+
Sbjct:  718 VIDSSNKGHQMMQRMGWKSGTGLGSSESGIVEPISGGEVRDRKDLYKGVGI------SNSDPFEAFRKNKAGSY 785          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1707.4729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFV9_ECTSI1.030e-12880.93Calcium homeostasis endoplasmic reticulum protein ... [more]
A0A6H5J830_9PHAE1.280e-12578.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPB1_9STRA2.090e-2836.99Calcium homeostasis endoplasmic reticulum protein ... [more]
A0A7S3JU05_9STRA3.140e-1431.68Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2STI1_9STRA2.130e-1334.80Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A397GXL9_9GLOM1.060e-742.17Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
UPI001884D5D32.220e-746.25LOW QUALITY PROTEIN: SURP and G-patch domain-conta... [more]
H9F9W1_MACMU2.470e-748.68Calcium homeostasis endoplasmic reticulum protein ... [more]
UPI001884F8643.570e-746.25SURP and G-patch domain-containing protein 1-like ... [more]
A0A0K2TGR8_LEPSM5.970e-744.59Calcium homeostasis endoplasmic reticulum proteinl... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1707contigL-elsbetiae_contig1707:3461..16136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.8
Seed ortholog evalue4.1e-104
Seed eggNOG ortholog2880.D8LFV9
Preferred nameCHERP
KEGG koko:K12841
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0007204,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008285,GO:0008380,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0016070,GO:0016071,GO:0016528,GO:0016529,GO:0019725,GO:0023051,GO:0023056,GO:0030001,GO:0030003,GO:0031090,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0032879,GO:0033017,GO:0034220,GO:0034641,GO:0042127,GO:0042175,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050848,GO:0050850,GO:0051179,GO:0051209,GO:0051234,GO:0051282,GO:0051283,GO:0051480,GO:0051641,GO:0051649,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060401,GO:0060402,GO:0065007,GO:0065008,GO:0070013,GO:0070588,GO:0070838,GO:0070884,GO:0070886,GO:0071704,GO:0072503,GO:0072507,GO:0072511,GO:0090304,GO:0097553,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098827,GO:0106056,GO:0106058,GO:1901360,GO:1902531,GO:1902533
EggNOG free text desc.positive regulation of calcineurin-mediated signaling
EggNOG OGsKOG4368@1,KOG4368@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Ec32 ortholog descriptionG-patch domain
Ec32 orthologEc-05_005330.1
Exons9
Model size1050
Cds size993
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815711.089746-UTR-L-elsbetiae_contig1707:3460..34791622815711.089746-UTR-L-elsbetiae_contig1707:3460..3479Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1707 3461..3479 +
1691683052.8068073-UTR-L-elsbetiae_contig1707:3460..34791691683052.8068073-UTR-L-elsbetiae_contig1707:3460..3479Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1707 3461..3479 +
1622815711.2179143-UTR-L-elsbetiae_contig1707:16098..161361622815711.2179143-UTR-L-elsbetiae_contig1707:16098..16136Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1707 16099..16136 +
1691683052.9334352-UTR-L-elsbetiae_contig1707:16098..161361691683052.9334352-UTR-L-elsbetiae_contig1707:16098..16136Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1707 16099..16136 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815711.1019247-CDS-L-elsbetiae_contig1707:3479..35211622815711.1019247-CDS-L-elsbetiae_contig1707:3479..3521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 3480..3521 +
1691683052.823935-CDS-L-elsbetiae_contig1707:3479..35211691683052.823935-CDS-L-elsbetiae_contig1707:3479..3521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 3480..3521 +
1622815711.1123943-CDS-L-elsbetiae_contig1707:4674..48041622815711.1123943-CDS-L-elsbetiae_contig1707:4674..4804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 4675..4804 +
1691683052.8356273-CDS-L-elsbetiae_contig1707:4674..48041691683052.8356273-CDS-L-elsbetiae_contig1707:4674..4804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 4675..4804 +
1622815711.1223671-CDS-L-elsbetiae_contig1707:7035..71561622815711.1223671-CDS-L-elsbetiae_contig1707:7035..7156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 7036..7156 +
1691683052.8473258-CDS-L-elsbetiae_contig1707:7035..71561691683052.8473258-CDS-L-elsbetiae_contig1707:7035..7156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 7036..7156 +
1622815711.1345508-CDS-L-elsbetiae_contig1707:7880..80011622815711.1345508-CDS-L-elsbetiae_contig1707:7880..8001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 7881..8001 +
1691683052.8622613-CDS-L-elsbetiae_contig1707:7880..80011691683052.8622613-CDS-L-elsbetiae_contig1707:7880..8001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 7881..8001 +
1622815711.1457064-CDS-L-elsbetiae_contig1707:10399..104951622815711.1457064-CDS-L-elsbetiae_contig1707:10399..10495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 10400..10495 +
1691683052.8739796-CDS-L-elsbetiae_contig1707:10399..104951691683052.8739796-CDS-L-elsbetiae_contig1707:10399..10495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 10400..10495 +
1622815711.1562762-CDS-L-elsbetiae_contig1707:12486..126621622815711.1562762-CDS-L-elsbetiae_contig1707:12486..12662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 12487..12662 +
1691683052.8857336-CDS-L-elsbetiae_contig1707:12486..126621691683052.8857336-CDS-L-elsbetiae_contig1707:12486..12662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 12487..12662 +
1622815711.176285-CDS-L-elsbetiae_contig1707:13403..135221622815711.176285-CDS-L-elsbetiae_contig1707:13403..13522Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 13404..13522 +
1691683052.8969984-CDS-L-elsbetiae_contig1707:13403..135221691683052.8969984-CDS-L-elsbetiae_contig1707:13403..13522Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 13404..13522 +
1622815711.1872966-CDS-L-elsbetiae_contig1707:15145..152161622815711.1872966-CDS-L-elsbetiae_contig1707:15145..15216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 15146..15216 +
1691683052.9126494-CDS-L-elsbetiae_contig1707:15145..152161691683052.9126494-CDS-L-elsbetiae_contig1707:15145..15216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 15146..15216 +
1622815711.2012155-CDS-L-elsbetiae_contig1707:15981..160981622815711.2012155-CDS-L-elsbetiae_contig1707:15981..16098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 15982..16098 +
1691683052.9254515-CDS-L-elsbetiae_contig1707:15981..160981691683052.9254515-CDS-L-elsbetiae_contig1707:15981..16098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1707 15982..16098 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1707.4729.1prot_L-elsbetiae_contig1707.4729.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1707 3480..16098 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1707.4729.1

>prot_L-elsbetiae_contig1707.4729.1 ID=prot_L-elsbetiae_contig1707.4729.1|Name=mRNA_L-elsbetiae_contig1707.4729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
MSGDPAQEKRKAEEKAAEEAAERVLSRVKTMADGGPAKSISNAANSNANG
DPSSEAKGTAVLPLAVAVQAVPSLAPAPETMPVCHVPYPWRGALYPVMGK
AQSDASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILKVSLRNGFRRYKP
VDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLKQVDEQRQKDKEQRRGEE
ERRLAGNEGSSGGGGGGGGGQRDRDRGRSSQPQGLRAKQAQLEIESDMQG
RDKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQMDKAGIGG
GEGAVKKKTAAEQDAFEAYRRNKSYSFRRF*
back to top

mRNA from alignment at L-elsbetiae_contig1707:3461..16136+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1707.4729.1 ID=mRNA_L-elsbetiae_contig1707.4729.1|Name=mRNA_L-elsbetiae_contig1707.4729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12676bp|location=Sequence derived from alignment at L-elsbetiae_contig1707:3461..16136+ (Laminarionema elsbetiae ELsaHSoW15)
GTCGGGATCGCTGGGAGGAATGTCGGGAGATCCGGCGCAGGAGAAGAGGA AGGCTGAGGAGGTGATTTTCCATAAATCTATTAAGAATTGAATTTTTTGT CAGAGGCCAGAATTTCACCGCCTCTCGGCCTCTGTGAGCGGAGTATTCGG ACTTTTCGGGCTCTGTGAGGCCACTATTTTTCGGGTCTGCACCCCCTCCT CCCTCCTATCTCTCTCTCTCTCCCTCTCTCTTTCTCTCTCTCAACCCTCA ACCCCTACAACACATATATATTTTTTCTTTCTAACAAATGTCTTGCGAAT TTTTTCAGCACATGTCAGCCGTCTACATATGTCCAACCCGCGAAAAACGT GTTTAGTCACAATATAATTAAATAGTTGTATTGTTAAGGGGGACTAACCT GTCTGTTGTAGTAGGCACTAAACTAAGCCTTCCCCGTGATTTTCTCCGTT TTTTCGTGTTTGTGCTGCTGGTGGGGTTTAGGATGTGGATTGGTTGTTTT TGTTCTTGTTTTGGGTGGTTTGTTGGGCTGGAGTTCTTGGTCTGTTTTCT GGGGGTCTGTTCTTGTCTTGTGGCAGGCAAGTCGGCAGCCTCTGGCCACT CGCCCCGTTTACTCGCGCGGCACTTCGTTGTCTCCGCCCGGGAGGGTTGG TTGCTATTGCCGATGATGGTGATGGTGGTGATGGTGGTGATGGTGGTGAT GGTGATGATGATGATGATGGTGATGATGATGGTGGTGGTGATGATGGTGA TGATGGTGATGATGACGGGGATGGTGATGATGATGATGATGATGGCGATG ATGATAATGGTGGTGGTAGTGGTGGTGATGATGATGATGGTGATGATGGT GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGA TGATGATGATGATGATGATGGTGGTGATGATGGTGATGATGATGTTGAGG ATGATGATGGTGATAATGATAATGGTGGTGGTGGTGGTGGTGGTGATGAT GATAATGTTGATGATGCTGACGACGATGCCGACGGTGATGACCGCGTTGA CGCGTGCCTGGCGGCCTTGCCGTGAAAACTACGTCGAAGCACCGGATGTT GTATGCATGTACTTCGTATAATACAATTATCCACGAACCGGTGGCGTGCA GTAGGTTTCACTCGCGAATCTCTCGCCCGATCGGAATCAAACCCCCTCTT GCTCTGATCTGCAGAAAGCGGCGGAGGAGGCGGCGGAGCGGGTGCTGTCT AGAGTGAAGACCATGGCAGACGGTGGCCCCGCAAAGAGCATCAGCAACGC CGCCAACAGCAACGCCAACGGGGATCCGTCCAGCGAGGCCAAAGGTGTGC GTGCTCAAGCGAGGCTCTTTTTGATTTTGATTTCTCATGATATGTTTTCC ACCGGGCGCCTCACGCAAGACAGGCACACTCTCAGTACTTGTGCGTTCTG CGTGACTGTGTGAGTGCCGCGTCCACCGTGGGTGACACAAGATACCACAC CCTCTCTGGGCAGATTTTCAGAGCTCGGTTCCTCCTCAGCAAGAAAAGTG CCACTGCCGAAAGGGGGTGCCACTGCCTTAAGGGGGTGGCGTTGGAAATA TCTAGTCGAGGGCTGTCCGAAAATGTGTGGTTTGGTGCTGGCACCCTCTT TTGTTACGGAGTAATGGAGCTCTAAAAGACGGTCCAGGGGGTGTGTGGTG TCTTGTTTCTTGTGTCACCTACGATACCTACTCACCCCACCTGAAGGCAA ATCCGCTTGATGCGGTGAGGTTTGCGTTTCCATGTATCTCGCGTTTTTTT ACTCCGTGGGGGATTGATTTGATTGGGTGTTGGGTAGGTATGTTGATGAG TGAAAAAAAAAGATATATTTCGAGATCAGCGTTTCTCTGTGGGGGTCTGT CCTTCCTCATGGGGTCAGACATCTGCGTTGGGCCTGTTTTTTTGCATGTG CTGGGCGTCGACAAAGCCTTCTCTTTCCTAGCAAACCCGCCGGAGGGGTG CCCGTTCTGGTACGATTTGTTGGGGTGCCAGTGGTTCGCTCGGTCCACGC AGAAGATGTCTGCGATCTCTCTTGAGCCGTTGATTAGCTTCCTTCCGCGT GCGATTCCGAGCAGACCGAGATGGACTGAACAGAGAATGGGGAGCTTCAC TGCCTCTCCACACCTCTATAAACAGCCAAATTGTCTCTCCTCGCGTCCAA CCTCTCGACCTTTCCGACCGATTGCACCCTAGAGGGAGGGCGGGGCATGT GGAGGAAACTCAGCAGGGGTATGAATCTCCATCTGACGTTTGAACCCTTT TCGCACTTACGTAACCCCCTGCTGGGGACAAGGAAAAGGCTGAGTTTTTG TTTTAGGATTTTGGAGCAAGATATGTATATGTATATTTACTGCTTCGTCC CTTGACCGGGGACAAAGTTGTCCCGTCGTCAAACACGAGTGGCTCTTCAT TTTCATAGATTCTTCGAAGCATGTGTGTGGAGTCGAAGACTACTTACCCA CGCACCCTACGCACGTCTGTTAGGCTGCTTTCACTACATAGGCAGGCGTA ACCCGTTTTTCACCGGCTGTGATGTTTTTCACTAAGCAAACCCGTTTTCA CATTCTATGAGTTTTTTTTCACCGTTTAAGCAGGTGTTTAACCCGTGTTC ACCGTCTGTAAGATTTTCACTAGGCAGGCGTTTAACCCATGTTCACTGTC GGTGATGTTGTTTTCACTAGGCAGGCGTTCAACCCGTGTTCACCGTCTGT AAGATTTTCACTAGGCAGGCGTTCAACCCATGTTCACCGTCTGTAAGATT TTCACTAGGCAGGCGTTCAACCCGTGTTCACTGTCTGTGAGGTTGTTTCC ACTAGGCAGGCGTTCAACCCGTGTTCACCGTCTGTGAGGTTGTTTTCACT AGGCAGGCGTTTAACCGGTGTTCACCGTCTGTGATGTTGTTTCCACTAAT CAGGCGTTCAACCCATGTTCACCGTCTGTGATGTTTTCACTAGGCCGGCG TTCAACCCGTGTTCACCGTCTGTGAGGTTGTTTTCACTTGGCACCGTGTT CACCGTCTGTGAGATTGTTTTCACTTGGCAGGCGTTTAACCCGTGTTGAC CGTCTGTGAGGTTGTTTTCACCAGGCAGGCGTTCAACCCGTTTTATAGCG TCTGTGAGGTTTCCACTAGGCAGGCGTTTGACCCATGTTCACTATCTGTG ATGTTGTTTTTACTAGGCAGGCGTTCAACCCGTGTTCACCGTCTGTGATG ATTTCACTAGGCAGGCGTTTAACCGGTGTTCACCGTCTGTGAGGTTGTTT CCACTAATCAGGCGTTCAACCCATGTTCACCGTCTGTGATGTTTTCACTA GGCAGGCGTTCAACCCGTGTTCACCGTCTGTGAGGTTGTTTTCACTTGGC ACCGTGTTCACCGTCTGTGAGGTTGTTTTCACTTGGCAGGCGTTTTACCC GTGTTGACCGTCTGTGAGGTTGTTTCCACCAGGCAGGCGTTCAACCCGTG TTCATCGTCGGTAAGGTTTTGACTTGGCAGGCGTTTTTTACCTGTCTGCC CCCCCCCCCCCCTTTGACGTTTCAGGAACGGCGGTGCTTCCTTTGGCAGT GGCTGTTCAGGCGGTTCCCTCGCTCGCTCCGGCCCCGGAAACGATGCCGG TGTGCCATGTGCCGTACCCCTGGCGCGGGGCGCTATACCCCGTTATGTGA GGAGGCGTTTGCGCTGCTATTTTTTTTCGTATGCTGCTGTTGGTTGGTTG ATGTCGGTGTTGGTGATGGTGGCTGCGGACGCGATGTACCGTAGGTGACA CAAGATACCACACCCCCTGGACCGATTTTTAGAGCTCCATTACTCCGTAT CGAGGAGAGGGTGCCAGCACCAAACGAAACATTTTCGGACAGCCCTCGGC TAGATCTTTCCAACGCTACCCTTTTTGGCACTGGCGCTATTCTTGCTGGG GACGAATCGAGCTTTGAAAATCTGCCCAGGGGGTGTGGTATCTTGTGTCA CCTACGGTATGTATGTGTCGTGAGCGCGCGCGGATGATGCGGACCGCCTT TAATTCCTGTATATTTTTTTTGGGGGGAGGCGGCAGCCTAGATTCTTAAG GGGGCGCGAATCCCCCAACCGGATACCCCCTTTACTATTTTTCATATGTT TTATCAACTGGGCAAGGCAAAAAAAATGTGGGACCGGGAGGGGGGGCGGG GGGGGTGGCATAAGTGTGAGGTATTGCAGCCCGCATGCCCCGTTGGAAAT CATAGACAGAGGTTTCGTAACCCTAGACCTAACGCTAATCCCAAACAGAC CACCCATTAGCCGTTTCCATACTTCATCCCATATGATTTATTCCAGTAAA GCCGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTCAACTCTTTTG TTTTTAATTGTACGCCGCAGGGGCAAAGCTCAGAGCGACGCCAGCAAGTT TCCCGTGGCGGCGGGTCTCGCCAGCACCGCGCACGGGACCGACAACATGC TCGAGAAGCTGCCCGTGGGAACGATGGCGGGGATCCTGAAGGTGCGTCGA GAGCTGATCTCAGACAGAGGCTTGCAAGCATACTGTGTGTGAGTGACCCC GGTTGGGTCGTCTAGCGTGTCGTAGTGGAGTATCGGGGCCAGCGGGGCAG ACGACCAATATGCCAACACCAATAATAATGGGAGGAACAAATATAGATAG AAATAAACATATTTTGCATGGTATTTTGGCGGCGCTACTGGGGCGCCCGC CGATCGAGGATGCAAGCCGTGTTGTTTTTTTCATGCTCGCCAGCCACCAC GGGAATCGACCGCGTCACGTGTTTTGGGTTAATACGGACATGTGGAGATG GTACTGGATAGAGAGATCGGAACGGGTTTTGATGTTAGACAGCAGCAACA CACACAAACCAAAGTACGGCACGGCACGGCACGCGGCCGCGGCCGGCGGA GATATAAACACCGTAATATCCCTTGAGAACGCCCCGGGGTGTAAACATTT TTCAAAGCCGATTTTCTCCACAACCGAGAGGGTACGATCGACAAAAAATG TTAAATTTGAGAAGATCTCGACGAGATCCTTCCAAATAAGGGAACATCGC TCGACCACAGCAACCCACCCATTGCGGAGGAAATCGGCTTTTTAAATTGT TTACACCCCGGGGCGTTCTCAAGGGAGATAGTACGGTTCTTCAGCAGTGC TACTGGACAAGTTGCCGACTCTTACATGAGGCTTGAGTCTTTTTTTTTTC TTCTTGTTGACGGGTATGTGCCGAAAAAACGTTCACCAGCCGGCTTGTTA CTTTTCGATCCGTTGGGGGCAAGGAAAACGAACGTGCGTTCGGTTGTGAG TGGGTTTATCCCTATCTGGTGCTGAAGGACGGCTTTTGTGTATCGTCTTA GTGCGTGCCTGGTGAAAGAAAGGGGAGCCGAGCCAGCAGTCTTCGCAAGT TTTACTGGAATAAATCATATGGGATAAAAGGCCGGATCTAATGGGGACGA AATTTGGCCACGGAACGGAATATTTGTTCCGGTCCATGGCTCCCCCTTTG GAGGGGGGGAGGAGTAGGCGAGACACGAACGGATTTTTTTGGGTCGCCAA CCAAACCACGGCGACACTGCTGTCTCAAGGCTATATGTAGCGGGGGCCCC GCCGCCATCGTTGCCACCGTCGTTGAGCAGCCTTCGCAAGTTTTACTGGA ATAAATCATATGGGATAAGAGTACACATGGAAACGGCTAATGGGGGGTCG GTTTGGGGTTGGGGTTGGGGTTAGGGTTAGGGTTACGGAACCCCTGTCTA CTTCTATACATTTAGACAGGAGTTCTTCGCGAAGCCGGTCCAGCCGAGCT CGAGTTCGGGCTCGTCTTGGTGAGTCGATGTGTGTATGTGTTGCTCCTGC ACAAATCGAGAAATGCCGGCGTGGAACTTTAAATAGATGGTGGTGCAAAC AACTCACACCTTTTGACGTGCTGGTGTCGCGACAATCGCGGGCTGGATTT TTTTTTTTTCCCTCCCATGATTGGCTTGTTCGTCGTCTGCCTGCCCCACT CGCCCCCTTCCCCCGCTACGACTAGCTAGACGACCCAACCGGGGTCACAC GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGCCACAAAAAACAAA AACAAACACCCAAAACCACACACACCCTGACTCCTACNNNNNNNNNNCCC CGCCCCCCCCCCCCCCCCCCTTGTGCTGCGCAAAACGACCCAACCGGGGT CACAGGGGGGGGGGGGGGGGGGTTGGACCCCTTCCTGCGGTGCCTGCCTT CGATGTTTTTATGTGTATATGTTTCTCCTGCTGAAATCAAGAAATGCTGG CGTATGTAGGACTTTAAATAGATCGTGGTGCAAACACCCCACACCTTTTT ACGTGCTTGTGTCGCGACAATCGCGGGCTGGTGAAGGACCATGGCGCCAC GCATTACCTACACAGCCGTGACACTCCAAAGTCCGCGATTGGCTTCCGCG TGTTCTGTGTTCGGAAGTGAGACCAAACTAAATATGTATGTTAAGTAGGT AAATTAGGTATATACCCGGGGCGAACGCGCGCCTATGTACTACCTCTTGA AAGAGAAACAGTTGTTGAATCAAAAATGGAACCTAACCCACATTGAGACG GGACTCCGTGAGATTCAGTCGGTATTCCATATTCAGTGACGTCATATTGG GCCGGCCGAGTAGAAAAACACCTAAAATAAAAAAGAACCAAGCAACATGT ATTTCATTCCGGGGAGAAACCCTCCGTGATGTCGGGATCTTGTCATCTAC TACCTCTTCGTTTTTTTTCTTTGTTTTTTTTGTGAGGGAAACATTTTTTG TTTTTTGCTTCTGTTTTTTTCTTGTTTTGTCTCTGCATTGTCGTCTTCCG CATTGCGAAATACTTTTTTTTTTTTTTTTCTAAATGAAGGTGTCGCTTCG GAACGGGTTTCGGAGGTACAAGCCCGTCGATATCAAGCTGCTGCCCAAGT ACGTGACACCGCACATCGAGCCCGGGCGACTGGACGTGAGTGTTGATGGT CCTGTTGAAGTCCTGTTGACAGTTCCGTTGTTGTTGTCGTTTTTGCTGTT GTTGGTGTCGTTTGCTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCCT CTGTTGTTGGTTGTGTGGTTGTTGTTGTTGCCGTTGCTGTTGTTGGTGGT GGTGGTGCCGTGTGGTTGTTGTTTGTTGCCGCTGCTGTTGTTGGTAGTGT GGTTGTTGTTGTTGTTGTCGTCGTTAAAATAAAACAAAGTATCAAAGATG GAACCTAACCCATACTAGAGCAAAGACTCGATATGGGGTTCAAACGGTAT TCCATACAGAGATGTAATATTTGGCGAAGCGAGCAGAAAAAACAACCTAA ATATCAGAAGAATTCAACATCTCCCCTGCAAAGATTTAGATTTGCGAGGT CGGCCAACAATTATTCAGCGGGTAGAGCCCACCATGATGCCGTAATGTTG TCATCTACTTCAAAATAGGAACACATCGTCGTTGCTGCTGCTCCCGTTGA TAGTCTGTTGTTATTGTTGTTAGAGCCTGCCAAACGTCAACATTTTAATT AGTGAAGCAACGCTCAGACGACGATGCATGTAGGCGTAGGCGACACAACG TACCACACCCCCTGGACCGACTTTTAGAGCTTCATTACCCCGTAACGAAG AGGGTGATGCAAGCACCAAACGACACATTTTCGGACAGCCGTTGACTAGA TCTTTCCAACGCCATCCCCCCTTCAGCACACTCGGCAGTCTTCTTGCTGG GGAGGAATCGAGCTTTGAAAACGTGTCCCGGGAGTGTGGTATCTTGTGTG TCACCTTGGGTATATGTCGCGGAGAAAAGTTGCTCGGGAGGCTCGGGGCT ACCACTCGGGAAAAAAAAATGTGAATGTTTTAAAAAAAAATTTGGGTATC CGTAAGAAAATCAAAAACAAAAATTAGCCTAGAAAGGGTATTCGTAAGAA AATAAACACAAAAATTAGCCTAGAAAGGGTATTCGTAAGAAAATAAAAAA CAAAAATTAGCCTAGAAAGGGTATCCGTAAGAAAATAAAAAACAAAAATT AGCCTAGACAGGGTATCCGTAAGAAAATGAAAAACAAAAATTAGCCTCGA AAGGGTATCCGTAAGAAAATAAAAAACAAAAATTAGCCTCGAAAGGGTAT CCGTAAGAAAATAAAAAACAAAAATTAGCCTAGAAAGGGTATCCGTAAGA AAAAATAAGAAACAAAAATTAGCCTAGAAACATTCGTCTACGGGTTGTTC CGGGTTTATCGCACCCCCGCCGTGTTGGCGTTTTTTTACAGCGTATTTCT CCACAACCAGGAGGGTGCGAACACTAACTGATACCTCTCTGGAAAGCCCC CGACGAGACGTTTCGAAAACCACTCTTTTCGGGAGTGGTACCCTCCTGGT TGTGGAGGAATACGCTATAGAAAAACGCTAACACGGGGGTGCGATAACCC GCATGATTGCGGTAGTTGTCGATGTTGCTGAGCTGCCGCTCTCTTCATAG AGAATGACTGACCACTTTCGGCCCTTATGTAGCCGGTATTTGTTTTCGTG TGTTTTTTTTTTTACCATGAATTGAGTCTCTGCGAGTTACCTCGAAAGTT CTTGCTGCCTCTCTCCTTGTTCCGCGCCCTGTTTCTCTTCCGCGCCCTCT CTGCCCCCCCTCCACCCTCTCTCTTGCCGGCCCCCTCCCCCCCTGTGCGC TGATCGTTCGCCTTATGTAACACGTTGTGTTTTTCGTGTGTTTCGCGGTG CGCAATTCGTTTTTTCTTTTTCCGTCATTTTTTAACTCCCCCCCTACTGT AACACCTGTAAATATACATGCATACACCATCTCTCTTGCGCCCGCCCTCC TTCTCCCCTGTGTGCTGATCTTTCGCCTTATGTACACGTTGTGTTCTCGT GTGTTTTCGCGGTGTGCGATTCGTTTTTTTTTTCCCGTCCTTTTTTTTTA CGAACATCATACTTAACACCAACCAGGTCCGAGTTGACGAGTTCTACAGC CGGGCAACCCTCAAGCAGGTGGACGAGCAGCGGCAGAAAGACAAGGAACA GCGGAGGGGGGAGGAGGAGAGGAGACTCGCCGGCAATGAAGGGAGCAGCG GCGGCGGCGGCGGCGGCGGCGGTGGGCAAAGGGACCGAGATCGGGGCCGA AGGTGACTACTGCCGCGCGAGCTGAGCAGGCTGTTCCTTGTATACGGAAT CTAGTGCATATTAGTCTACATAGCTTGGCTTTCGTGTTGGGTCGTCGCGC GTTTTGAGCAGGGTTTTGGTTGTATACGGAATCTAGTTTTAATAAGAGCC TAGGCTGGCTTTCGCGTTGGGTCTTGTTTTTCGTGAAACCAATCTGTGTA GCCCCCCCCCCGTCATCGGTTCGGATCCCGCTATCTATTACCATACTGTA GAAGATGGTATCTAGCGGTTTTTGTCAAACTGACACCCCTTGGGGGAGAC ATGTCCGGCACGGGCTACACTATTGGATACTTCGAGACACGGGATTTATT TTCACCCTTTCTCATTCCTTGCGTTTGTTGATTGTTCTTGCCGAACAACA AGTATGCGCTTTGATGTATGCACTTTGACGTGGTAACCTTCCCCGTCTCG ATGTACACGTTGATGTATGCACTTTGATGCAAGTATGTATGTAGAAGTAT ATTCAGTAACCCTGCCGCCTATAGTCCGTGGTGTCCGTGGTGACCGCATG CAAAGCACCGAATCACTTGCACCAGGGCCTTTGATTCAACGGCGTTTGGT TGTGTTGCGCTCGCTGTTCTGTCTCACTATTCATGACAAAAGATGTTTTT ATTTTATCCTAATGTACCTTATAGGTGTTTTTAATTCATTTTTTTTTTTC CCCTCTTTTTTGTTCCGTATTTCTGCTACATATCTTCGCGCAGCAGCCAG CCGCAGGGCCTGCGGGCGAAGCAGGCCCAGCTCGAGATCGAGAGCGACAT GCAGGGCAGAGACAAGGTGCTGGGCGAGGAGAACATCGGGCACAACTTGC TCAAGAAGATGGGTGAGTGTGGGTTGCTCGTGCTGCTTGCTCTACCGTAG GTGACACAAGATACCACACACACCCCCTGGATCGAATTGTAGAGCGCCAT TACTCCGGAACCAAGAAGGTTCCAGCACCAAACGACCCATCTTCGGACAG TCCTCGACTAGACCTCTCCAACGCCACCCCTTTCGGCACTGGCACTCTTT CTTACTGGGGAGGAATGGAGCTTTGAAAATATGTCCACGGGGTGTGATAT CTTGTGTCACCTACGGTACTGCTCGCATGCTTTTCGGCGTCCCCTGTGTA TGTGTGTAGTAGCTACATACGAAGTAGTTCCTCCGGAGGAAATTCAAGCG AAGTGGGAACACAGTAGTAGTAGTAGCAGGGGGAAGCCGAAGCGTGCTTT TTTCGTTGTTTTCCCCTTTATAATCTGTGCCCTCTTGTAATTATGTTTGA TGACACATGAAACGGCACAATGAAGCGACACGAGAGTCTGAGTATCGGGG GAGATGATCAGTGCTCATGACTTTTCGCCTTTGCCGCATGGTTCGCGTCG AATCCGCGTTCCGAGGTCGCGAAGGTGATCGCGTGCCCCTCTCGCCCCCC CCCCCCGTTCGAGTAGGACGAAGCTCCCCGGTGGCCTGTGTCTTTCATTT ATTATTGCCAGCACTAGAGGCTCCTTGCCACGAAGGGCATTTGCCAGAGT ACTGACCCGGTGGTCACACAGAAGGGTTCCTCTCCCTGAGGCCCCAACAC CCACACCTTCTGCGGTGCTTGCCTTCAAGATTTGTTTTTTGGGGAGATTT GTCTGATCGGTTGTAGATCGACAACAATTTGCCATCGGAGTTGTAGTTGT CATCGTTGTTGGAGAGTTGAGCCATCACTCTCTCTCTCTCGTCGTCCAGT CTGCCCGGAAACACCAAGCATCGCTCTGTACATAGACAGGAGACCACAAC CTTCGTTAGTAAATGATACTTCGACTTCATTGCTGACGAGGGTGGGGAGG AGTGCTGAACCCTGTTCGCGATAAAAACATATCAGGCAAGCACCGCAGGA GCCCCCTCCTGTGTGGCCCCGGTTGGGTCGTCTAGCTAACTAGTCGTAGT GGATGGAGGAAGGGGGCCAGTGGGGCAGACGACGAATAAGCCTTATATTA TGGGAGGGCAAAAAAAAAAGAAAAAAAACATCACGGCGTCTGTCGGATTT CTCGTCTCCTTGGCGAAACAAGCCGCACACAAGGCAGGGGCTGGCAGGCC TCTCTGAGGCTCTCTCCGGGGACCACCGCCTTCGCGAAGGAATTAAGTCT ATCTAGGAAAATAGGAAATAATAGACAGGGGTTCCGTAACCCTAACTCTA CCCCTTAACCCCAAACCGACCCCCCGCTTTGCCGTTTCCACACTCTGTCC CGTATGTTATTTAGCTTTCGTAAAAACCCGCGTGGGCTACAATACCGCTG GCTCTCTGATCGTGTGTCGTTTCGTTTGTCGTTTCGTCTCCTTTGGTCGC AAGCAACGTCACACAGCCAGCCCTCGTCTCTCTCTGGTTTTGTCTCTCGC CGCTGTTACTGCTGCTGTCACTGTTTTCTGTCGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGTCGTGATTTTAAGGGTGGAGCGAGGGGA CCGGCCTCGGCTCCTCGAGATCGGGCATGGTGGAGCCCATTTCCGGCTCT GGCCAGGTGATTACTTTGTTTTTTGCACTTTCTTTTTGCCTTTTTTTTGA CATTTTGTTTTTATGTATATTTTTCTGTTTGCCATCCAGGTGCGAGGTTT GTTTTTTTGCATTTTCTTTCTGCATTTTCTTTCTGCATTTTGTTTCTGCA TTATGTATTCTCCTCCTTTTTGTATTTGCCTTCCGACAGGCAGGCTCTAC TATAACAAAACTGCTCACGCCCTGAGAGGGGGTTTGCATTTCTCCAGCAG GCGTGTGTTGGACGGGTGAAGGAATGTCTTGCTAGCTATGTGGGCGGGCG GTACGCGAAGGCTTGCTGTGTGTGTGTTTTTTTTTTGTTCCTCCAAGTTT ATACATCTCGCTCGTAAATGTGGTCGTTTAGCGACCCCTACATACGTGCT TTTACATGCATGTTGTAGCAGTTGGGGAGCAGCTGCAAGGTGCCTCGCGT GGTTGCTTTAAATACCACAGTCGTCGCCACTAGTGCCCGTAAGATGCTGA CAATGTTCGCAACCTCCTCTGGTGTGGTTGGTCGCGGAGGGGGGGGGGGG CTTGTCTGCAGATCAGTGTTGGGTATCAAGTTGTTTTTTGGCTTGATATG ATACTTGATAACATCACATGATAGCATCACATGATATGTCACATGATATT ATATCAAGATATCAAGTTAAAAAGCGTGATGTTGATATTAATTAATCACA TGATCATCACATGATAATAACATCATGTTCAAGTTCATGATACTGGACCC CCAACACTAAATATACTGCAGATGGACAAGGCCGGCATCGGCGGTGGGGA AGGCGCGGTGAAGAAAAAAACTGCGGCGGAGCAGGACGCTTTCGAGGCCT ACCGAAGAAACAAGAGCTATTCCTTCCGCAGGTTTTAGCGGCGCGTTTTA GAGAAATAGGAGGAGTTCATTGGTCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1707:3461..16136+

>mRNA_L-elsbetiae_contig1707.4729.1 ID=mRNA_L-elsbetiae_contig1707.4729.1|Name=mRNA_L-elsbetiae_contig1707.4729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1986bp|location=Sequence derived from alignment at L-elsbetiae_contig1707:3461..16136+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGGGAGATCCGGCGCAGGAGAAGAGGAAGGCTGAGGAGATGTCGGG
AGATCCGGCGCAGGAGAAGAGGAAGGCTGAGGAGAAAGCGGCGGAGGAGG
CGGCGGAGCGGGTGCTGTCTAGAGTGAAGACCATGGCAGACGGTGGCCCC
GCAAAGAGCATCAGCAACGCCGCCAACAGCAACGCCAACGGGGATCCGTC
CAGCGAGGCCAAAGAAAGCGGCGGAGGAGGCGGCGGAGCGGGTGCTGTCT
AGAGTGAAGACCATGGCAGACGGTGGCCCCGCAAAGAGCATCAGCAACGC
CGCCAACAGCAACGCCAACGGGGATCCGTCCAGCGAGGCCAAAGGAACGG
CGGTGCTTCCTTTGGCAGTGGCTGTTCAGGCGGTTCCCTCGCTCGCTCCG
GCCCCGGAAACGATGCCGGTGTGCCATGTGCCGTACCCCTGGCGCGGGGC
GCTATACCCCGTTATGAACGGCGGTGCTTCCTTTGGCAGTGGCTGTTCAG
GCGGTTCCCTCGCTCGCTCCGGCCCCGGAAACGATGCCGGTGTGCCATGT
GCCGTACCCCTGGCGCGGGGCGCTATACCCCGTTATGGGCAAAGCTCAGA
GCGACGCCAGCAAGTTTCCCGTGGCGGCGGGTCTCGCCAGCACCGCGCAC
GGGACCGACAACATGCTCGAGAAGCTGCCCGTGGGAACGATGGCGGGGAT
CCTGAAGGGGCAAAGCTCAGAGCGACGCCAGCAAGTTTCCCGTGGCGGCG
GGTCTCGCCAGCACCGCGCACGGGACCGACAACATGCTCGAGAAGCTGCC
CGTGGGAACGATGGCGGGGATCCTGAAGGTGTCGCTTCGGAACGGGTTTC
GGAGGTACAAGCCCGTCGATATCAAGCTGCTGCCCAAGTACGTGACACCG
CACATCGAGCCCGGGCGACTGGACGTGTCGCTTCGGAACGGGTTTCGGAG
GTACAAGCCCGTCGATATCAAGCTGCTGCCCAAGTACGTGACACCGCACA
TCGAGCCCGGGCGACTGGACGTCCGAGTTGACGAGTTCTACAGCCGGGCA
ACCCTCAAGCAGGTGGACGAGCAGCGGCAGAAAGACAAGGAACAGCGGAG
GGGGGAGGAGGAGAGGAGACTCGCCGGCAATGAAGGGAGCAGCGGCGGCG
GCGGCGGCGGCGGCGGTGGGCAAAGGGACCGAGATCGGGGCCGAAGGTCC
GAGTTGACGAGTTCTACAGCCGGGCAACCCTCAAGCAGGTGGACGAGCAG
CGGCAGAAAGACAAGGAACAGCGGAGGGGGGAGGAGGAGAGGAGACTCGC
CGGCAATGAAGGGAGCAGCGGCGGCGGCGGCGGCGGCGGCGGTGGGCAAA
GGGACCGAGATCGGGGCCGAAGCAGCCAGCCGCAGGGCCTGCGGGCGAAG
CAGGCCCAGCTCGAGATCGAGAGCGACATGCAGGGCAGAGACAAGGTGCT
GGGCGAGGAGAACATCGGGCACAACTTGCTCAAGAAGATGGCAGCCAGCC
GCAGGGCCTGCGGGCGAAGCAGGCCCAGCTCGAGATCGAGAGCGACATGC
AGGGCAGAGACAAGGTGCTGGGCGAGGAGAACATCGGGCACAACTTGCTC
AAGAAGATGGGGTGGAGCGAGGGGACCGGCCTCGGCTCCTCGAGATCGGG
CATGGTGGAGCCCATTTCCGGCTCTGGCCAGGGTGGAGCGAGGGGACCGG
CCTCGGCTCCTCGAGATCGGGCATGGTGGAGCCCATTTCCGGCTCTGGCC
AGATGGACAAGGCCGGCATCGGCGGTGGGGAAGGCGCGGTGAAGAAAAAA
ACTGCGGCGGAGCAGGACGCTTTCGAGGCCTACCGAAGAAACAAGAGCTA
TTCCTTCCGCAGGTTTTAGATGGACAAGGCCGGCATCGGCGGTGGGGAAG
GCGCGGTGAAGAAAAAAACTGCGGCGGAGCAGGACGCTTTCGAGGCCTAC
CGAAGAAACAAGAGCTATTCCTTCCGCAGGTTTTAG
back to top