prot_L-elsbetiae_contig1704.4719.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1704.4719.1
Unique Nameprot_L-elsbetiae_contig1704.4719.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length272
Homology
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BLAST of mRNA_L-elsbetiae_contig1704.4719.1 vs. uniprot
Match: D8LSD0_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD0_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.240e-14
Identity = 70/186 (37.63%), Postives = 83/186 (44.62%), Query Frame = 0 
Query:    5 GIRRRGSGS-----GINTEIAGDGARWATDKHLNGVRPGNQSGGGGSEARRXXXXXXXXXXXXXXGGEAGTVAGHGIRWASSKPTIKTRPNAMRPSDSYRDRPG-----IPKAIASDGLAAENEDAASKGSHSFSLADSRHSSARERPHLATTKVGHGDQERGGPASPTRALARATARRMSALGSK 180
            G  RRGSG      G        GARWA  K L+G      +G G S+                     G V   G+RWASSKP I TR     P+  YR+R G     +P AIASDG A E+E          S A++            T +     QERGG  SPTR  ARATARR+SALG+K
Sbjct: 1560 GAVRRGSGCDGLGFGGXXXXXXGGARWAIGKPLSGTGRRGSAGTGDSDT--------------------GKVLADGVRWASSKPAINTRSITTAPAQPYRERAGSADGRVPIAIASDGQAEESESGXXXXPPPRSRAEA----------FTTARSARSLQERGGATSPTRGFARATARRLSALGAK 1715
[Close]
BLAST of mRNA_L-elsbetiae_contig1704.4719.1 vs. uniprot
Match: A0A6H5L078_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L078_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 3.050e-14
Identity = 70/186 (37.63%), Postives = 84/186 (45.16%), Query Frame = 0 
Query:    5 GIRRRGSGS-----GINTEIAGDGARWATDKHLNGVRPGNQSGGGGSEARRXXXXXXXXXXXXXXGGEAGTVAGHGIRWASSKPTIKTRPNAMRPSDSYRDRPG-----IPKAIASDGLAAENEDAASKGSHSFSLADSRHSSARERPHLATTKVGHGDQERGGPASPTRALARATARRMSALGSK 180
            G  RRGSG      G        GARWA  K L G   G +  GG  ++                  + G V   G+RWASSKP I TR     P+  YR+R G     +P AIASDG A E+           S A++            T +     QERGG ASPTR  ARATARR+SALG+K
Sbjct: 1693 GAVRRGSGCDGLGFGDXXXXXXGGARWAIGKPLGGT--GRRGSGGTDDS------------------DTGKVFADGVRWASSKPAINTRSTTTAPAQPYRERAGSADGRVPIAIASDGQAEESGXXXXXXXXXRSRAEA----------FTTARSARSLQERGGAASPTRGFARATARRLSALGAK 1848
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1704.4719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSD0_ECTSI2.240e-1437.63Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L078_9PHAE3.050e-1437.63Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1704contigL-elsbetiae_contig1704:11435..12250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1704.4719.1mRNA_L-elsbetiae_contig1704.4719.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1704 11288..12881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1704.4719.1 ID=prot_L-elsbetiae_contig1704.4719.1|Name=mRNA_L-elsbetiae_contig1704.4719.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=272bp
MPLTGIRRRGSGSGINTEIAGDGARWATDKHLNGVRPGNQSGGGGSEARR
SSGGQRSLSRGSSGGGEAGTVAGHGIRWASSKPTIKTRPNAMRPSDSYRD
RPGIPKAIASDGLAAENEDAASKGSHSFSLADSRHSSARERPHLATTKVG
HGDQERGGPASPTRALARATARRMSALGSKAVGGMSLGGTNIGGNSSGPS
ATTRPLLPPPPTVSGAFTGSGSPGAKGEGPPPPPSREQHRRMSAAPLTEQ
HLQGVSDSHRGYAAPAAVRAA*
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