prot_L-elsbetiae_contig17035.4716.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17035.4716.1
Unique Nameprot_L-elsbetiae_contig17035.4716.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length77
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig17035.4716.1 vs. uniprot
Match: D8LRY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY6_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 1.150e-8
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:    1 MILFVMLWILHDPREDDSVAGPDDSSKGVAGPDGDEYWEVPAGADG 46
            MILFVMLWILHDP E  S  G D+ S+G+A  +  EYWE+P  ADG
Sbjct:  267 MILFVMLWILHDPAEGGSSLGSDEGSQGLAAAEDPEYWEIPPEADG 312
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17035.4716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY6_ECTSI1.150e-860.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17035contigL-elsbetiae_contig17035:1388..1618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17035.4716.1mRNA_L-elsbetiae_contig17035.4716.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17035 1304..1849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17035.4716.1 ID=prot_L-elsbetiae_contig17035.4716.1|Name=mRNA_L-elsbetiae_contig17035.4716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=77bp
MILFVMLWILHDPREDDSVAGPDDSSKGVAGPDGDEYWEVPAGADGYGGG
GGGSKVSGPGLELAVDGQRSDKHGAI*
back to top