prot_L-elsbetiae_contig1703.4710.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1703.4710.1
Unique Nameprot_L-elsbetiae_contig1703.4710.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length414
Homology
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BLAST of mRNA_L-elsbetiae_contig1703.4710.1 vs. uniprot
Match: A0A6H5LCQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ2_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.850e-29
Identity = 96/289 (33.22%), Postives = 149/289 (51.56%), Query Frame = 0 
Query:   98 LHVASVIVAALSLFYFAMVLGDELQW---SFCMLGILQFPVNISCAFFATRMWIYAIDPRLMRRSPEVLALSSQMEKPAGRRAAFWAVSIAPSLGTVFTLAGLNQYAMKAVAVGIIFQAVAIGATFWVGGRSLVGAINESLRQHQQQ---------RRETVTVLTAATAVT--GTTRGGADENDQDGGDVSG-------------------DNFVPGAGDQPLLAAKKKIKRMTIFALQNVVVVMSMLLVTVFTDYGVAAPLLLYMTPITFVPLVWGIVNVQLHAGRSK 353
            +HV +V  AA+SLFYF +VL  E +W   S  ++ + Q  V++ C F   RMWIY  D RLM+ S  +L +S+ +EK  G+R ++  +S  P + TV  L G  + A K VAV  I   V    +FW+ GR+L+ AI+ SL+  +++         RRE+V  +   T     G  RG +    + GG +S                    D    G G+  L AAK+K++ + +F     +   ++LL+++ + YG   PL+L+   +   PLVW   N+QLHAGRS+
Sbjct:    1 MHVTAVANAAISLFYFLLVLLVEARWHEISVLVMILNQITVSV-CGFSTVRMWIYTNDTRLMQGSITILRISAALEKKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVVADTSFWIFGRALLRAIDASLQNSRKRAMESVFGKDRRESVLAVLGGTEADEEGGRRGSSISAGEGGGRLSRKWSSGRLQRRGSWWGGEGRDESELGGGE--LQAAKRKVRWVMVFCALMSLEGYAILLLSILSKYGTTVPLILFGVQMAIFPLVWHAFNIQLHAGRSR 286
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1703.4710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LCQ2_9PHAE1.850e-2933.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 299..320
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..298
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 321..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..347
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 348..413
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availableTMHMMTMhelixcoord: 52..71
NoneNo IPR availableTMHMMTMhelixcoord: 98..117
NoneNo IPR availableTMHMMTMhelixcoord: 178..197
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 299..318
NoneNo IPR availableTMHMMTMhelixcoord: 207..229
NoneNo IPR availableTMHMMTMhelixcoord: 323..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1703contigL-elsbetiae_contig1703:1845..5923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1703.4710.1mRNA_L-elsbetiae_contig1703.4710.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1703 1591..6351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1703.4710.1 ID=prot_L-elsbetiae_contig1703.4710.1|Name=mRNA_L-elsbetiae_contig1703.4710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=414bp
MCTQGCRTFLWGGRGTPVSDEDGRCFCVCQDDSWSDLNLLGCASCVPMKV
HMIYGWAGLILSVAALCHAVYQLRRQLRFNAQELAPWTSCAEQCRRSLHV
ASVIVAALSLFYFAMVLGDELQWSFCMLGILQFPVNISCAFFATRMWIYA
IDPRLMRRSPEVLALSSQMEKPAGRRAAFWAVSIAPSLGTVFTLAGLNQY
AMKAVAVGIIFQAVAIGATFWVGGRSLVGAINESLRQHQQQRRETVTVLT
AATAVTGTTRGGADENDQDGGDVSGDNFVPGAGDQPLLAAKKKIKRMTIF
ALQNVVVVMSMLLVTVFTDYGVAAPLLLYMTPITFVPLVWGIVNVQLHAG
RSKIRSRSSQGLLASAISSRYRRSSLFLDASLSRRISSVYFAFAGKQPVV
PTEQPAQQAHPTE*
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