prot_L-elsbetiae_contig1702.4704.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1702.4704.1
Unique Nameprot_L-elsbetiae_contig1702.4704.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
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BLAST of mRNA_L-elsbetiae_contig1702.4704.1 vs. uniprot
Match: A0A6H5KJX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX9_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 3.090e-54
Identity = 123/226 (54.42%), Postives = 135/226 (59.73%), Query Frame = 0 
Query:    1 EGSRAAAKAVEGFIRKNIEAYFGCWTSTYTLFSLDPRLSKTAKRLASGLGINLDDVLAVPMRDRVSGDGFLYHIPALERLVGLAPREGRRGEEEEGGRGGTESGDXXXXXXXXXXXXSQLVLLGDSRVPRSEGLGAALRLACEAANRNWSLAEAEASVLQAFRVFVEVCVLRRQPGYRPAPLAAAPP---VPAGGDPG--TGGGHSSSDLGQVSPARTPVV-NRGG 220
            EGSRAAAKAVEGFIR NIE YFGCWTSTYTLFSLDPRL+KTAK+LAS LGI+LDD L VP R+RV GDGFLYHIP LERLVGL P EGR                                         SEG G +L+L               A V++AFRVFVEVCVLRRQPGY+PAP  A P      A G+PG          D G+VSPARTPVV +RGG
Sbjct:  123 EGSRAAAKAVEGFIRTNIEEYFGCWTSTYTLFSLDPRLAKTAKKLASDLGISLDDTLVVPTRERVFGDGFLYHIPGLERLVGLPPHEGRA----------------------------------------SEGGGDSLQLV--------------AVVMRAFRVFVEVCVLRRQPGYQPAPAPAPPSSSSTQASGNPGGXXXXXXXGGDPGEVSPARTPVVVSRGG 294
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BLAST of mRNA_L-elsbetiae_contig1702.4704.1 vs. uniprot
Match: D7FGV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV4_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 3.130e-44
Identity = 112/226 (49.56%), Postives = 121/226 (53.54%), Query Frame = 0 
Query:    1 EGSRAAAKAVEGFIRKNIEAYFGCWTSTYTLFSLDPRLSKTAKRLASGLGINLDDVLAVPMRDRVSGDGFLYHIPALERLVGLAPREGRRGEEEEGGRGGTESGDXXXXXXXXXXXXSQLVLLGDSRVPRSEGLGAALRLACEAANRNWSLAEAEASVLQAFRVFVEVCVLRRQPGYRPAPLAAAPPVPAGGDPGTGGGHSSS-----DLGQVSPARTPVV-NRGG 220
            EGSRAAAKAVEGFIR NIE YFGCWTSTYTLFSLDPRL+KTAK+LAS LGI+LDD LAVP R+                                                                   S G  AALRLACEAANRNWSLAEAEA V++AFRVFVEVCVLRRQPGY+ AP  A                        D G+VSPARTPVV +RGG
Sbjct:  542 EGSRAAAKAVEGFIRTNIEEYFGCWTSTYTLFSLDPRLAKTAKKLASDLGISLDDTLAVPTRE-------------------------------------------------------------------SGGRAAALRLACEAANRNWSLAEAEAVVMRAFRVFVEVCVLRRQPGYQAAPAPAPXXXXXXXXXXXXXXXXXXXXXXXDPGEVSPARTPVVVSRGG 700
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1702.4704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJX9_9PHAE3.090e-5454.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGV4_ECTSI3.130e-4449.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1702contigL-elsbetiae_contig1702:18360..23840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1702.4704.1mRNA_L-elsbetiae_contig1702.4704.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1702 18360..23842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1702.4704.1 ID=prot_L-elsbetiae_contig1702.4704.1|Name=mRNA_L-elsbetiae_contig1702.4704.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
EGSRAAAKAVEGFIRKNIEAYFGCWTSTYTLFSLDPRLSKTAKRLASGLG
INLDDVLAVPMRDRVSGDGFLYHIPALERLVGLAPREGRRGEEEEGGRGG
TESGDGSGGGGGGSGSGSQLVLLGDSRVPRSEGLGAALRLACEAANRNWS
LAEAEASVLQAFRVFVEVCVLRRQPGYRPAPLAAAPPVPAGGDPGTGGGH
SSSDLGQVSPARTPVVNRGG
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