prot_L-elsbetiae_contig1702.4703.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1702.4703.1
Unique Nameprot_L-elsbetiae_contig1702.4703.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length118
Homology
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BLAST of mRNA_L-elsbetiae_contig1702.4703.1 vs. uniprot
Match: A0A6H5KJX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX9_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 8.230e-49
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 0 
Query:   20 QAVFELAKSEEFWALLTSVLIQDLSWDTRSRHAGGGGPAGRPLQGGGERGLDGAQTARLCSTLRCHAIVLQILALEMHRGLRPLGAAVLPPPLQAATLP 118
            QAVF LA SEEFW LLTSVLIQDLSWDTRSRHAGGGG AGRPLQGGGERGLDG QTARLC TLRCH+IVL+ILALEMHRGLRPLGAA LPPPL+AA LP
Sbjct:    2 QAVFALATSEEFWVLLTSVLIQDLSWDTRSRHAGGGGAAGRPLQGGGERGLDGRQTARLCHTLRCHSIVLEILALEMHRGLRPLGAAALPPPLKAAALP 100
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BLAST of mRNA_L-elsbetiae_contig1702.4703.1 vs. uniprot
Match: D7FGV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV4_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.130e-22
Identity = 54/69 (78.26%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:    1 MALELVLALWRAEGVGRLGQAVFELAKSEEFWALLTSVLIQDLSWDTRSRHAGGGGPAGRPLQGGGERG 69
            MALELVL LW AEGVGRLGQAVF LA SEEFW LLTSVLIQDLSWDTRSRHAG  G  G    GGG  G
Sbjct:  431 MALELVLGLWHAEGVGRLGQAVFALATSEEFWVLLTSVLIQDLSWDTRSRHAGERGRRGATPSGGGGAG 499
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1702.4703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJX9_9PHAE8.230e-4988.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGV4_ECTSI1.130e-2278.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1702contigL-elsbetiae_contig1702:16179..18308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1702.4703.1mRNA_L-elsbetiae_contig1702.4703.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1702 16147..18308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1702.4703.1 ID=prot_L-elsbetiae_contig1702.4703.1|Name=mRNA_L-elsbetiae_contig1702.4703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp
MALELVLALWRAEGVGRLGQAVFELAKSEEFWALLTSVLIQDLSWDTRSR
HAGGGGPAGRPLQGGGERGLDGAQTARLCSTLRCHAIVLQILALEMHRGL
RPLGAAVLPPPLQAATLP
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