mRNA_L-elsbetiae_contig17007.4692.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17007.4692.1
Unique NamemRNA_L-elsbetiae_contig17007.4692.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 2.170e-98
Identity = 142/203 (69.95%), Postives = 172/203 (84.73%), Query Frame = 1
Query:  370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            S+YE MDGHVIARSTAY ++  VINALNACPEL+C+WP+  D A AA  F++RS+ +V++KC GA DGLF+RM K ++K+  EPN Y++GHKKGFGMNFQ +CDAQYRI+AW MNCPGSQND TAF FSGFDKLL  LP+G F++GDAAY AS+RV+VPFPG+ L+ SQDA NY+ SQCRM IEQT+GI+VRRWGILWRPMEV
Sbjct:  112 SIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEV 314          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 7.740e-80
Identity = 124/203 (61.08%), Postives = 158/203 (77.83%), Query Frame = 1
Query:  370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            S++E MDG+VIARSTAY I  RVI+A+N   ELDC WP+  D  +    ++ RST  VI+ C GAMDGLF+RM + + +    P +++SGHKKGFGMNFQG+C+A+Y IIAWTMNCPGS ND TAFK S F  +L+ LP G +I+GDAAYPASD+VLVP+PG+ LT SQDAYN++QSQ R+ IEQ FGIMV+ WGILWRP+++
Sbjct:  119 SVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDM 321          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 1.260e-75
Identity = 121/203 (59.61%), Postives = 153/203 (75.37%), Query Frame = 1
Query:  370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            S++E MD +VIA+STAY I  RVI+A+N   +L+C+WP   D    A  ++ RST  VI++C GAMDGLF+R+     K    P +++SGHKK FGMNFQGIC+A Y II WTMNCPGSQND TAFK SGFD LL ++P   FI+GDAAYPAS+RVLVP PG+ LTLSQDAYN++QSQ R+ IEQ FGI+V+ W ILW+P+ +
Sbjct:  123 SVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAI 325          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 4.400e-75
Identity = 116/203 (57.14%), Postives = 152/203 (74.88%), Query Frame = 1
Query:  370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            S++E MDG V A+STAY I  RVI+A+N   E DC WP+  D  +    ++ RST  VI  C GAMDGLF+ + + + +    P  ++SGHKKGFGMNFQ +C+A+Y+I AWTMNCPGS ND TAFK SGF+++L+ LP G +I+GD AYPASD+VLVP+PG+ LT SQD+YN++QSQ R+ IEQ FG MV+ WGILWRP++V
Sbjct:   53 SIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQV 255          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 4.580e-70
Identity = 104/147 (70.75%), Postives = 127/147 (86.39%), Query Frame = 1
Query:  538 EVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            +V++KC GAMDGLF+RM K ++K+  EPN Y++GHK GFGMNFQ +CDAQYRI+AWTM+CPGSQND TAF F+ FDKLL  LP+G F++GDAAY AS+RV+VPFPG+ L+ SQDA NY+ SQCRM IEQT+GI+VRRWGILWRPMEV
Sbjct:   16 DVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEV 162          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 8.510e-62
Identity = 111/203 (54.68%), Postives = 138/203 (67.98%), Query Frame = 1
Query:  370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            S+YE MDGHVIARSTAY ++  VINALNACPEL+C+WP+  D+    S     +  +V++KC GAMDGLF+RM K ++K+  EPN Y++GHKKGFGMNFQ +C               SQND TAF FSGFDKLL  LP+G F++G+AAY AS+RV+VPFPG+                    EQT+GI+VRRWGILWRPMEV
Sbjct:  123 SIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEV 293          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.610e-47
Identity = 95/203 (46.80%), Postives = 120/203 (59.11%), Query Frame = 1
Query:  370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            S+YE MDGHVIARSTAY ++  VINALNACPEL+C+WP+A                +V++KC GAMDGLF+RM K ++K+  EPN Y++GH+KG                                                 ++GDAAY AS+RV+VPFPG+ L+ SQDA N + SQ RM IEQT+GI+VRRWGILWRPMEV
Sbjct:  123 SIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEA--------------RMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEV 263          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.420e-39
Identity = 79/195 (40.51%), Postives = 124/195 (63.59%), Query Frame = 1
Query:  400 IARSTAYQISGRVINALNACPELD-CRWPKAVD-VANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            +++ TA+ I  +V++A+N+  E+    +P++ D     A+ ++++ST    +    A DGLF++    T+ +T    +Y+SG K G+G+N Q  CDA YR  + +   PGS ND TA+  S     ++ LP GF++LGDAAYP SD +L P+PG  L L +DA+N++ SQ R+ IEQ FGI+V +WGILW+P+ V
Sbjct:  155 VSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRV 349          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5KBS4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS4_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.460e-38
Identity = 94/233 (40.34%), Postives = 129/233 (55.36%), Query Frame = 1
Query:  316 CGSGRVPGCTDSTVARWWSMYEGMDGHV-IARSTAYQISGRVINALNACPEL---DCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKG---FGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEVWGLGG 993
            CGS R  G  D      W    G   HV +     YQI   VI+A+N  P +   D    K   + NA + FKD+ST  +      A+DGLFI+     +K+T     Y+SG K     +G+N Q +C A YR+ A +   PGS ND  A+  S   K + +LP GF I+GDAAYP  +++L P+PG +L   +D++N+  SQ R+ IEQ+FGI+V  WGILWRP+ V  LGG
Sbjct:   16 CGSLRCRGVEDPG----WRQLLGCPTHVWLVGVVTYQILWDVIDAINNTPAVGAFDFPLTKEGCMRNA-NRFKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAKTAYGINVQAMCTADYRLCAMSAISPGSTNDWVAWTRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRV-QLGG 242          
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.760e-38
Identity = 78/191 (40.84%), Postives = 117/191 (61.26%), Query Frame = 1
Query:  412 TAYQISGRVINALNACPELDCRW-PKA-VDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978
            T Y     VI+A+N+ PE+   + P+   D    A+ FK +ST  +   C   +DGLF++    + KDT     Y+SG K  +G+N Q +C A YR  + +   PG+ ND  A+  S   + + +LP GF++LGDAAYP S+++L P+PG  L L +D++N+  SQ R+ IEQ+FGI+V  WGILWRP++V
Sbjct:  152 TVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKV 342          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6B6_9PHAE2.170e-9869.95DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE7.740e-8061.08DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE1.260e-7559.61DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE4.400e-7557.14DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE4.580e-7070.75DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE8.510e-6254.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS8_9PHAE1.610e-4746.80DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JV75_9PHAE2.420e-3940.51DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KBS4_9PHAE1.460e-3840.34DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE1.760e-3840.84DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17007contigL-elsbetiae_contig17007:453..3399 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score122.1
Seed ortholog evalue3.1e-25
Seed eggNOG ortholog4792.ETI53028
Hectar predicted targeting categoryother localisation
EggNOG free text desc.nuclease activity
EggNOG OGs3QI3U@4776,KOG4585@1,KOG4585@2759
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size1842
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17007.4692.1prot_L-elsbetiae_contig17007.4692.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17007 825..2565 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815708.1448894-UTR-L-elsbetiae_contig17007:452..8241622815708.1448894-UTR-L-elsbetiae_contig17007:452..824Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17007 453..824 +
1691683051.0478957-UTR-L-elsbetiae_contig17007:452..8241691683051.0478957-UTR-L-elsbetiae_contig17007:452..824Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17007 453..824 +
1622815708.1976838-UTR-L-elsbetiae_contig17007:2565..33991622815708.1976838-UTR-L-elsbetiae_contig17007:2565..3399Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17007 2566..3399 +
1691683051.0900934-UTR-L-elsbetiae_contig17007:2565..33991691683051.0900934-UTR-L-elsbetiae_contig17007:2565..3399Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17007 2566..3399 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815708.1576653-CDS-L-elsbetiae_contig17007:824..11211622815708.1576653-CDS-L-elsbetiae_contig17007:824..1121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17007 825..1121 +
1691683051.0616071-CDS-L-elsbetiae_contig17007:824..11211691683051.0616071-CDS-L-elsbetiae_contig17007:824..1121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17007 825..1121 +
1622815708.1718147-CDS-L-elsbetiae_contig17007:1786..20561622815708.1718147-CDS-L-elsbetiae_contig17007:1786..2056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17007 1787..2056 +
1691683051.0727777-CDS-L-elsbetiae_contig17007:1786..20561691683051.0727777-CDS-L-elsbetiae_contig17007:1786..2056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17007 1787..2056 +
1622815708.184773-CDS-L-elsbetiae_contig17007:2496..25651622815708.184773-CDS-L-elsbetiae_contig17007:2496..2565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17007 2497..2565 +
1691683051.0822444-CDS-L-elsbetiae_contig17007:2496..25651691683051.0822444-CDS-L-elsbetiae_contig17007:2496..2565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17007 2497..2565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17007.4692.1

>prot_L-elsbetiae_contig17007.4692.1 ID=prot_L-elsbetiae_contig17007.4692.1|Name=mRNA_L-elsbetiae_contig17007.4692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=212bp
MYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFK
DRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQG
ICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYP
ASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPM
EVWGLGGFQEW*
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mRNA from alignment at L-elsbetiae_contig17007:453..3399+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17007.4692.1 ID=mRNA_L-elsbetiae_contig17007.4692.1|Name=mRNA_L-elsbetiae_contig17007.4692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2947bp|location=Sequence derived from alignment at L-elsbetiae_contig17007:453..3399+ (Laminarionema elsbetiae ELsaHSoW15)
CGAGATGCGAGCTCCTCGTAGCAAGCGCGCCAGGCGCCTTTCACGGCTGG TGGCGATGACCGAGGCGTTAGCCCAAACGCTGGAGATCGTGTCCATGGCG GAAGATCTGGACGAGCTCCAATCATATTCCAAGAAGACTAGAAGCACCCT GTTGCCGCGGGAAAGGCGCTCGTGGGCGGAGTACATCAAACCGATGCTCG GCGATGGCACCTTCAAAGGACGCTTCCGTATGGACAACGAATCTTTCGTA GTTCTCGTTGACCTTGTGCGGCCAGCCCTGGAGAGGAACGAAAAGATGGG AGCATTGCGGAATGGTGCGGTTCCGGTAGAGTTCCAGGTTGCACTGACTC TACGGTGGCTCGCTGGTGGTCCATGTACGAGGGGATGGACGGTCACGTAA TCGCAAGGAGTACAGCCTACCAGATATCGGGGCGCGTCATCAACGCGTTG AATGCATGCCCCGAACTGGACTGCAGGTGGCCGAAGGCGGTCGATGTTGC CAACGCCGCGAGCGGTTTCAAGGACCGCAGCACCTTCGAGGTGATCAAGA AGTGCGCGGGAGCAATGGATGGTTTGTTCATTCGCATGAACAAGCTGACC AGCAAGGACACGACGGAGCCGAACAACTACTTCAGCGGCCACAAGAAAGG GTTTGGCATGAACTTCCAGGTGGGGGGATGAGAGTGTGTGGTGACAGTTA ACGTTTGCAGTTTGAGAAGCCGCCGAAGTTGATGGCCTCCTTCTCAAGGA CACGGCCCCGGCATGTGTGTGATAGTAAGTTAGTGTACTAGTCTACTGCT GCAGTGCTTGCTGCATACTGTAGTTCGGAGTTTCAAGGCATACAAAATAC AAAACATAAAACGGCCCCTTAGTTGTGGGTGAGATGAAGATTTTGTGCTC AAATGGGGGGGGGGGGGCGAAGCACAGAGCAGGTGGCACGGCAACACGTG TAGTCACCCCCGCCCCTGTACACTTGCGGTACGACTGCTAGACTACTGCT TTGCTGCTACTCCTAACGTGTGCTTTTAAGGCTCGAATTTCCTTCCCCAA GCGTTGCTTTCTCCCAACGATCTACACGTAAGATAGTAGTACCGTTTCTC CGGCCTACAGGGCGTGTGTAGCATTATGTAGCATGTTTGAAAGCAGCAGA CGTCGCACCAGCCGTGCGGCATATGCACACAAGGCGGACTTCAACAAACT GCCAATCTGTCGGCAGTGTTGCCAGACCTCCCGACGCACGCCCAGATATA CCACTCGTAAGCTTTACTCCGACCGATATCTAGAAAGATCTTTTTAAACC ACTGCTGTCGTGCGTTCGTTGTTTTGGCGTGAAGGGAATCTGTGATGCGC AATACAGGATAATCGCGTGGACGATGAACTGCCCTGGGAGCCAGAACGAC CTCACCGCCTTCAAGTTTTCCGGGTTCGACAAACTCCTCCGGCAATTGCC AGATGGATTTTTCATCTTGGGCGATGCCGCGTATCCGGCTTCCGACCGCG TCCTCGTCCCGTTTCCCGGGTCAAGGCTGACGCTAAGCCAAGACGCCTAC AACTACTTCCAGTCCCAATGCAGGATGTGCATCGAGCAGACGTTCGGCAT CATGGTAAGGCTGGTTAGGGTTAGTGCCTGCGGTTGGTAGACACATGCCT TTGTCTTGTATACCGTAGTCGGCTTTGCGTTCTCCCCGGAGAGAGGATGG TAAAGGCGTTCAACCCCCCATTCCTCGCGAGAGGTAGCCAAGGACGGTGT CGCGGTTTTTACCCGCAGTGTTTTCATGTTTTCATGTTTTTCCTGCATGG CGGTCCTTTGTGTCTCCCTTGTTTTTGCAGGGTTGCCACTGGTGTTGAAT AGTTACAACGTGCTTTAGGGTTGATCGCACCGGCGCTGCCATGCAGACGC AGTGCTACATATGGCCGTCTGTGTAAGTGGTGACACCAGGCAACGGAATA TCCCGTTTTAGTCCAGTACTTGCAAGGAATATGCAAACCAATGTACCTTC TCTCTCTGCCTGCGATTCGAATTCATGCAAACATGCATTCACAGGTGAGG AGGTGGGGGATACTATGGCGCCCCATGGAGGTTTGGGGCTTAGGAGGTTT CCAGGAGTGGTGACCTGCGTCGTCAGGATGCACAACTTCTGCCGCGATCG CATGGTGGATGTGCCCACAGGCAACGTGGGTGCCGTTACCCTGCCCGAGG GCGTTTCGTTCAACAAGGATGGGGGGATGGACAACGACTACTTCGAGCCG CAACCCTCAATATTGGGGCGGCCTATCGTGAACCAGGTCTCAGCATCAAA GCCGAGAGAGCAGATTCGTCGGGGAATAGAGATCGGACGGTTCGGCCGGC CGGCACATAATATGACGAGGAACGGACACAGGACCGGGGGTTCTTGATAG TTTTTGTTGTTTTTGTACGTACGTGCGAATAGTGGTTTGGTCTCCCAACC CAGGTCTGTTGGGTTTCTGAAGATTTAGGTGTGAGATTTCAACTTCTTTC CTCCGTCTTCGTTTGTCGTACTGCTGTGTACCTCGAAAATGAAGAGGTGC TCTTGCGACCTCTCTTGGCAAGTTATATTTTCTTGAAATTAAAATAGAAG TACAGGAGAATGCATGCATTGTGCTGTGTGCTTTATCTTGGCTGCGAGTT AATGTTTGGGTTGAGAGTGTTCCGACCTCCGCGTGCCTCGCTCAACTAGA TAGAATGCCCTACCTACGTTTGGGTACAACTTGGGTAGAAATTTGAAATA CGGGTGAAGACCACAAATCACTAGCCCGAGAGATGCATCCATAAAAACAT GTGCCCCAAGAGTTTTGATTTGTGTTTTCTCGGGGGGTGGATTTTTGGTG GGTCTAACTTTCGCAAACAAAAGAGCGGCGTTGGTGACACGCTAGATTGT ACCAGTACTCGGTTGTCCCCCCGGGCCCTCGCCATTGTTGAAAAGCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig17007:453..3399+

>mRNA_L-elsbetiae_contig17007.4692.1 ID=mRNA_L-elsbetiae_contig17007.4692.1|Name=mRNA_L-elsbetiae_contig17007.4692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1272bp|location=Sequence derived from alignment at L-elsbetiae_contig17007:453..3399+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACGAGGGGATGGACGGTCACGTAATCGCAAGGAGTACAGCCTACCA
GATATCGGGGCGCGTCATCAACGCGTTGAATGCATGCCCCGAACTGGACT
GCAGGTGGCCGAAGGCGGTCGATGTTGCCAACGCCGCGAGCGGTTTCAAG
GACCGCAGCACCTTCGAGGTGATCAAGAAGTGCGCGGGAGCAATGGATGG
TTTGTTCATTCGCATGAACAAGCTGACCAGCAAGGACACGACGGAGCCGA
ACAACTACTTCAGCGGCCACAAGAAAGGGTTTGGCATGAACTTCCAGATG
TACGAGGGGATGGACGGTCACGTAATCGCAAGGAGTACAGCCTACCAGAT
ATCGGGGCGCGTCATCAACGCGTTGAATGCATGCCCCGAACTGGACTGCA
GGTGGCCGAAGGCGGTCGATGTTGCCAACGCCGCGAGCGGTTTCAAGGAC
CGCAGCACCTTCGAGGTGATCAAGAAGTGCGCGGGAGCAATGGATGGTTT
GTTCATTCGCATGAACAAGCTGACCAGCAAGGACACGACGGAGCCGAACA
ACTACTTCAGCGGCCACAAGAAAGGGTTTGGCATGAACTTCCAGGGAATC
TGTGATGCGCAATACAGGATAATCGCGTGGACGATGAACTGCCCTGGGAG
CCAGAACGACCTCACCGCCTTCAAGTTTTCCGGGTTCGACAAACTCCTCC
GGCAATTGCCAGATGGATTTTTCATCTTGGGCGATGCCGCGTATCCGGCT
TCCGACCGCGTCCTCGTCCCGTTTCCCGGGTCAAGGCTGACGCTAAGCCA
AGACGCCTACAACTACTTCCAGTCCCAATGCAGGATGTGCATCGAGCAGA
CGTTCGGCATCATGGGAATCTGTGATGCGCAATACAGGATAATCGCGTGG
ACGATGAACTGCCCTGGGAGCCAGAACGACCTCACCGCCTTCAAGTTTTC
CGGGTTCGACAAACTCCTCCGGCAATTGCCAGATGGATTTTTCATCTTGG
GCGATGCCGCGTATCCGGCTTCCGACCGCGTCCTCGTCCCGTTTCCCGGG
TCAAGGCTGACGCTAAGCCAAGACGCCTACAACTACTTCCAGTCCCAATG
CAGGATGTGCATCGAGCAGACGTTCGGCATCATGGTGAGGAGGTGGGGGA
TACTATGGCGCCCCATGGAGGTTTGGGGCTTAGGAGGTTTCCAGGAGTGG
TGAGTGAGGAGGTGGGGGATACTATGGCGCCCCATGGAGGTTTGGGGCTT
AGGAGGTTTCCAGGAGTGGTGA
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