prot_L-elsbetiae_contig170.4687.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig170.4687.1
Unique Nameprot_L-elsbetiae_contig170.4687.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length345
Homology
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BLAST of mRNA_L-elsbetiae_contig170.4687.1 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 463 bits (1191), Expect = 3.020e-161
Identity = 237/339 (69.91%), Postives = 277/339 (81.71%), Query Frame = 0 
Query:    7 EGEGVQISPTEVGYFKGTDTSPPRRHRRQEAPKVATVVGLPGAGKSNLANKILNHPTWDAFEESDGMFGATVETQRAQWDDMVVIDTPGIPSHDPQTTVVNFDAIVDVLRREGSLSTLIFLIQQEEVSPVEFRDYAILLRQLNQLPCSKLIVCRQVAQSRRYKRTEEERRRAGATFVEQVLEDTGLSMPFLLLNDGYGSESFRQIDEIRGFVRRSERAPVEL-ASLRKSTELRLFWQRLADPACRLVALEEELEELELSLWHRSLWLACQVVPLAYISVSSPGAGCLWTGPYVKREQEAFSELRTELRNKKEEVELKKADKEELRAAKGISAYLDYMCS 344
            EGEG   +  +V +      S  RR  RQEAPKV  V+G+P AGKSNLANK+LNHPTWDAFEE DG +G+T ETQR +W D+VVIDTPG P HDP+TT  NFDA+V  LRREGSLSTLIFL+QQEEVSP EFRDYA+LLRQLN LPCSKLIVCRQ A SRR+KRTEEERR +GA FVE VL+D+GL+MP +LLNDGYGSES +Q+DEIR FV RSERA ++L ASLR   ELR F  +LADPA RL  + EE+E++E SLWHRSLW+ACQVVPLAYISVSSPGAGC+WTGPYVKREQEA + LR EL +KKEE+EL   D++ELRAA+G+ A+LDYMC+
Sbjct:    4 EGEGFLSARLDVEHQSAGAGSNGRR--RQEAPKVVMVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVIDTPGFPGHDPKTTSKNFDALVKALRREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLPCSKLIVCRQAALSRRHKRTEEERRHSGAQFVEGVLDDSGLNMPLVLLNDGYGSESIKQVDEIRRFVGRSERARLDLVASLRTFAELRSFAAKLADPASRLRTVREEVEQMEASLWHRSLWMACQVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELRAAQGVLAFLDYMCA 340
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BLAST of mRNA_L-elsbetiae_contig170.4687.1 vs. uniprot
Match: D8LN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN49_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 1.530e-72
Identity = 119/171 (69.59%), Postives = 142/171 (83.04%), Query Frame = 0 
Query:  175 RRRAGATFVEQVLEDTGLSMPFLLLNDGYGSESFRQIDEIRGFVRRSERAPVE-LASLRKSTELRLFWQRLADPACRLVALEEELEELELSLWHRSLWLACQVVPLAYISVSSPGAGCLWTGPYVKREQEAFSELRTELRNKKEEVELKKADKEELRAAKGISAYLDYMCS 344
            +R AGA FVE VLED+GL+MP +LLNDGYGSESF+Q+DEIR FV RSERA ++ LAS R   ELR F  +LADPA RL  L EE+E++E SLWHRSLW+AC VVPLAYISVSSPGAGC+WTGPYVKREQEA + LR EL +KKEE+EL   D++EL AA+G+SA+LDYMC+
Sbjct:   26 KRHAGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDPLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRSLWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELCAAQGVSAFLDYMCA 196
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig170.4687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSX4_9PHAE3.020e-16169.91G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D8LN49_ECTSI1.530e-7269.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..332
NoneNo IPR availableGENE3D3.40.50.300coord: 24..188
e-value: 1.5E-8
score: 36.2
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 42..136
e-value: 6.4E-8
score: 32.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 19..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig170contigL-elsbetiae_contig170:38464..42253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig170.4687.1mRNA_L-elsbetiae_contig170.4687.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig170 38464..42529 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig170.4687.1 ID=prot_L-elsbetiae_contig170.4687.1|Name=mRNA_L-elsbetiae_contig170.4687.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=345bp
MSNEEQEGEGVQISPTEVGYFKGTDTSPPRRHRRQEAPKVATVVGLPGAG
KSNLANKILNHPTWDAFEESDGMFGATVETQRAQWDDMVVIDTPGIPSHD
PQTTVVNFDAIVDVLRREGSLSTLIFLIQQEEVSPVEFRDYAILLRQLNQ
LPCSKLIVCRQVAQSRRYKRTEEERRRAGATFVEQVLEDTGLSMPFLLLN
DGYGSESFRQIDEIRGFVRRSERAPVELASLRKSTELRLFWQRLADPACR
LVALEEELEELELSLWHRSLWLACQVVPLAYISVSSPGAGCLWTGPYVKR
EQEAFSELRTELRNKKEEVELKKADKEELRAAKGISAYLDYMCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase