prot_L-elsbetiae_contig16974.4674.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16974.4674.1
Unique Nameprot_L-elsbetiae_contig16974.4674.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length229
Homology
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BLAST of mRNA_L-elsbetiae_contig16974.4674.1 vs. uniprot
Match: D7FQ16_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ16_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 3.000e-97
Identity = 164/230 (71.30%), Postives = 180/230 (78.26%), Query Frame = 0 
Query:    1 MMDFQLDHPKQLGRYVIIGYCDIAAAGIRVLEGMSGTS-VTATADASGLRETGREALTFSGMGGAVFDGLPPFEAVHFDEGRAPGSDRRDEPSVTLLKLNTAVGQDLAAALSLSLVDLLADHRATLDRVIVAAAVQPPKRHQLPKEATTIPSDVVCTFSCDGHRDCGGESSPSLPPLSGLPALPAGARLADSFLTALVRLCRLEELPLTVLARTGYRTTGAAADVDGTDE 229
            M DF L  PK+LG+ VI+GYCDI AAG+RVLEGMSG S +T     S LRETGREAL FSGMG AVFDG+P  EAVHF E  A G+   DEPSVTLLKLNTAVGQ L+A+LSLSLVDLL   R TLDR+I+AAAVQPPKRHQ+P EA TIP D VCTFSC G       SSP    LS LP+LP GAR+ADSFLT LVRLCRLE++PLTVLAR GYRTTGAAADVDGTDE
Sbjct:    1 MADFTLSAPKRLGKTVILGYCDIGAAGVRVLEGMSGASQMTGEGACSRLRETGREALAFSGMGAAVFDGVPALEAVHF-ESSAGGT---DEPSVTLLKLNTAVGQGLSASLSLSLVDLLVARRTTLDRLIIAAAVQPPKRHQIPAEAATIPPDAVCTFSCGGVDS---NSSPLPASLSTLPSLPTGARIADSFLTTLVRLCRLEDVPLTVLARVGYRTTGAAADVDGTDE 223
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16974.4674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ16_ECTSI3.000e-9771.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16974contigL-elsbetiae_contig16974:1240..3292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16974.4674.1mRNA_L-elsbetiae_contig16974.4674.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16974 1240..3292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16974.4674.1 ID=prot_L-elsbetiae_contig16974.4674.1|Name=mRNA_L-elsbetiae_contig16974.4674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
MMDFQLDHPKQLGRYVIIGYCDIAAAGIRVLEGMSGTSVTATADASGLRE
TGREALTFSGMGGAVFDGLPPFEAVHFDEGRAPGSDRRDEPSVTLLKLNT
AVGQDLAAALSLSLVDLLADHRATLDRVIVAAAVQPPKRHQLPKEATTIP
SDVVCTFSCDGHRDCGGESSPSLPPLSGLPALPAGARLADSFLTALVRLC
RLEELPLTVLARTGYRTTGAAADVDGTDE
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