mRNA_L-elsbetiae_contig1696.4668.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1696.4668.1
Unique NamemRNA_L-elsbetiae_contig1696.4668.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: D8LLS2_ECTSI (Fructose-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLS2_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 7.490e-20
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK
Sbjct:  360 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 402
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: W7TD05_9STRA (Fructose--bisphosphatase 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD05_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.160e-11
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGG ATTG++ + D+ P+ VHQRVPT+LGS EDV EL+ +LKK
Sbjct:    8 AGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKK 50
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: A0A835YUK2_9STRA (Fructose-bisphosphatase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.040e-11
Identity = 29/42 (69.05%), Postives = 38/42 (90.48%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALK 126
            AGG +TTG +R+M+I+PE+VHQRVPT+LGSA+DVTEL  +LK
Sbjct:  359 AGGKSTTGKERIMNIHPEQVHQRVPTFLGSADDVTELEKSLK 400
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: A0A1A8LJP2_9TELE (Fructose-1,6-bisphosphatase 2 (Fragment) n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8LJP2_9TELE)

HSP 1 Score: 60.8 bits (146), Expect = 1.040e-10
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGG+ATTGTQRV+D+ PE +HQRVP  +GS +DV E ++ +KK
Sbjct:   76 AGGLATTGTQRVLDVQPEALHQRVPFVVGSPDDVNEYLSFVKK 118
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: A0A6U5E2N6_9STRA (Fructose-bisphosphatase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5E2N6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.420e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGGM+TTG +RVMD+ P  VHQRVP  +GSAEDV E+I A K+
Sbjct:  168 AGGMSTTGRERVMDVQPSYVHQRVPIMMGSAEDVREIIEACKE 210
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: A0A183U5M0_TOXCA (FBPase_C domain-containing protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183U5M0_TOXCA)

HSP 1 Score: 59.3 bits (142), Expect = 1.490e-10
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGGMATTGT  V+DI PE +HQR P  LGS EDV E +  +KK
Sbjct:   31 AGGMATTGTSPVLDIQPESIHQRAPIILGSKEDVLEAMEYIKK 73
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: A0A6P8P3D3_GEOSA (Fructose-bisphosphatase n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8P3D3_GEOSA)

HSP 1 Score: 63.2 bits (152), Expect = 1.690e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGGMATTGTQRV+D+ PE +HQRVP  LGS +DV E I  ++K
Sbjct:  292 AGGMATTGTQRVLDVKPESIHQRVPLILGSPDDVQEYIACVQK 334
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: UPI0015A84994 (fructose-1,6-bisphosphatase isozyme 2 isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A84994)

HSP 1 Score: 63.2 bits (152), Expect = 1.700e-10
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGG+ATTGTQR++D+ PE +HQRVP ++GS EDV E ++ +KK
Sbjct:  296 AGGIATTGTQRILDVQPEAIHQRVPFFVGSPEDVEEYLSFVKK 338
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: A0A8J1TXA3_OWEFU (Fructose-bisphosphatase n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TXA3_OWEFU)

HSP 1 Score: 62.8 bits (151), Expect = 2.320e-10
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGGMATTGTQR++DI PE +HQR P ++GS EDV ++I+  KK
Sbjct:  294 AGGMATTGTQRILDIVPESIHQRSPIFMGSKEDVQDVIDMYKK 336
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BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Match: UPI00117CD2F9 (fructose-1,6-bisphosphatase isozyme 2-like n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI00117CD2F9)

HSP 1 Score: 60.5 bits (145), Expect = 2.340e-10
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:    1 AGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK 129
            AGGMATTGTQRV+D+ PE +HQRVP  +GS +DV E ++ ++K
Sbjct:   98 AGGMATTGTQRVLDVQPEALHQRVPFVVGSPDDVNEYLSFVQK 140
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1696.4668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLS2_ECTSI7.490e-20100.00Fructose-bisphosphatase n=2 Tax=Ectocarpus TaxID=2... [more]
W7TD05_9STRA1.160e-1162.79Fructose--bisphosphatase 2 n=1 Tax=Nannochloropsis... [more]
A0A835YUK2_9STRA2.040e-1169.05Fructose-bisphosphatase n=2 Tax=Tribonema minus Ta... [more]
A0A1A8LJP2_9TELE1.040e-1060.47Fructose-1,6-bisphosphatase 2 (Fragment) n=1 Tax=N... [more]
A0A6U5E2N6_9STRA1.420e-1065.12Fructose-bisphosphatase n=1 Tax=Corethron hystrix ... [more]
A0A183U5M0_TOXCA1.490e-1062.79FBPase_C domain-containing protein n=1 Tax=Toxocar... [more]
A0A6P8P3D3_GEOSA1.690e-1065.12Fructose-bisphosphatase n=2 Tax=Gymnophiona TaxID=... [more]
UPI0015A849941.700e-1060.47fructose-1,6-bisphosphatase isozyme 2 isoform X1 n... [more]
A0A8J1TXA3_OWEFU2.320e-1062.79Fructose-bisphosphatase n=1 Tax=Owenia fusiformis ... [more]
UPI00117CD2F92.340e-1060.47fructose-1,6-bisphosphatase isozyme 2-like n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1696contigL-elsbetiae_contig1696:23022..23153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score83.2
Seed ortholog evalue3.1e-14
Seed eggNOG ortholog2880.D8LLS2
Preferred nameFBP
KEGG rclassRC00017
KEGG koko:K03841
KEGG ReactionR00762,R04780
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910
KEGG ModuleM00003,M00165,M00167,M00344
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006091,GO:0006094,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009767,GO:0009773,GO:0009987,GO:0010033,GO:0010319,GO:0015979,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0019684,GO:0022900,GO:0030388,GO:0031967,GO:0031975,GO:0034637,GO:0042132,GO:0042221,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046351,GO:0046364,GO:0048046,GO:0050308,GO:0050896,GO:0055114,GO:0071704,GO:1901135,GO:1901576
EggNOG free text desc.fructose 1,6-bisphosphate 1-phosphatase activity
EggNOG OGsCOG0158@1,KOG1458@2759
EC3.1.3.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons1
Model size132
Cds size123
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815705.2252152-CDS-L-elsbetiae_contig1696:23021..231441622815705.2252152-CDS-L-elsbetiae_contig1696:23021..23144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1696 23022..23144 -
1691683049.1644692-CDS-L-elsbetiae_contig1696:23021..231441691683049.1644692-CDS-L-elsbetiae_contig1696:23021..23144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1696 23022..23144 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815705.23841-UTR-L-elsbetiae_contig1696:23144..231531622815705.23841-UTR-L-elsbetiae_contig1696:23144..23153Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1696 23145..23153 -
1691683049.1800017-UTR-L-elsbetiae_contig1696:23144..231531691683049.1800017-UTR-L-elsbetiae_contig1696:23144..23153Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1696 23145..23153 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1696.4668.1prot_L-elsbetiae_contig1696.4668.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1696 23022..23144 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1696.4668.1

>prot_L-elsbetiae_contig1696.4668.1 ID=prot_L-elsbetiae_contig1696.4668.1|Name=mRNA_L-elsbetiae_contig1696.4668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=41bp
MATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALKK*
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mRNA from alignment at L-elsbetiae_contig1696:23022..23153-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1696.4668.1 ID=mRNA_L-elsbetiae_contig1696.4668.1|Name=mRNA_L-elsbetiae_contig1696.4668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=132bp|location=Sequence derived from alignment at L-elsbetiae_contig1696:23022..23153- (Laminarionema elsbetiae ELsaHSoW15)
GCGGGGGGCATGGCGACCACCGGCACGCAGCGTGTGATGGACATCAACCC
CGAGAAGGTGCACCAGCGCGTGCCCACTTACCTCGGGTCCGCGGAGGACG
TAACCGAGCTTATCAACGCCCTCAAGAAGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1696:23022..23153-

>mRNA_L-elsbetiae_contig1696.4668.1 ID=mRNA_L-elsbetiae_contig1696.4668.1|Name=mRNA_L-elsbetiae_contig1696.4668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=246bp|location=Sequence derived from alignment at L-elsbetiae_contig1696:23022..23153- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGACCACCGGCACGCAGCGTGTGATGGACATCAACCCCGAGAAGGT
GCACCAGCGCGTGCCCACTTACCTCGGGTCCGCGGAGGACGTAACCGAGC
TTATCAACGCCCTCAAGAAGTAGATGGCGACCACCGGCACGCAGCGTGTG
ATGGACATCAACCCCGAGAAGGTGCACCAGCGCGTGCCCACTTACCTCGG
GTCCGCGGAGGACGTAACCGAGCTTATCAACGCCCTCAAGAAGTAG
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