prot_L-elsbetiae_contig1695.4661.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1695.4661.1
Unique Nameprot_L-elsbetiae_contig1695.4661.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1196
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1695.4661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..292
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 293..1196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..162
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 183..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 214..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 272..294
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 30..49
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 243..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1695contigL-elsbetiae_contig1695:3749..14033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1695.4661.1mRNA_L-elsbetiae_contig1695.4661.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1695 3749..14055 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1695.4661.1 ID=prot_L-elsbetiae_contig1695.4661.1|Name=mRNA_L-elsbetiae_contig1695.4661.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1196bp
MTTARTTDASLWEVAAILLARSYKSGYAKCLLRRFLLLMGAVLLFAVSFR
TAADAGGPAVALSSLAFSVLLAVVLPALIIYQPLVIPTSRRECTDLARVE
VADGVYSRRALQLGLVLDQLAVGAVVSFSVVGVMHAVVWHGVISELPSSG
VEVNIQLSGMVTLMAWVMSSLFNALALSRLSLGEAFAVGSSVRAVWVFFS
GAFLLTPALPAVLKAVAYTSPHYWTSTFMLRVLLDGLDLTGDCSSTSALA
CATGYGDLVATRLGLRVRSTGFSAVVMAAFALASLLFLVATVQTGSRRCY
GKCVAISDTGLGQEASAAVAPSRKAPPSGRRVTTGDSGDSAGSAIIGSTV
GAAGGVVFSTDCIDGDGGGGGGGGGDGSAHGHSKDSAAGNRAAPDNRTAP
DNKSSATGLAGRIPHARSGASGASSKRDKVNKAFALLVEQEERQHAASSR
STADIIAEHEERRLASAPAPASAARPFHSRTASGSQLFEGKLKWPTFLTP
GRSRGRKAASADQFPGSSKCGSSPAPFSLKSCSPPFSDTPFPDDGATPPP
LTPGRSYGKMTAAALKEVARGYETSSKSPPKFASGLGGWWAETAGGGFEG
QSYYVDAAGGGAGVEAAGREKGGGQERDGLPPLPVFKGSTGEALAKLVSS
SSLSSPSSPPEAKKSATSTALPPLPQHQQSPAARAPRPSAMTRPSSMTPR
RQLSGGTITAALAAGAAAAQAEARAEAASPAAAVADRPVGEALAVGHEPE
TSATTAVPSLQMSPAVALAGMGARARVFESSRSSSSPAAASGPRSASPSA
WAAKRVDGTPGGVVDSSAKDGTGVIFSRPSSAKVDPRQQQQQQQQQQDEP
TDASTGTSTGTGSNAKDSGPSEQQAVTQPAPPLPPHEHQEAQRGANLSRQ
SLKRPPAGPPGRQSPRARQRPPSEEEEQEEDCGSELEEERAEAKVEMEGA
GDDHRRREQELRLPAEDERPEQRRLLSRTHKSFEVLFPTSAAEEEKEEED
LLDGGEEIPRFIRGFEVMFPTSDPTSDPTSEPFSAVPEQYQLTLPPGQRQ
PGEEDGQRGRDPGQPTPGRQLSAAAVAASAGATPPGSGRPSKSAGAPPSS
GSVSRAGRSFFPGAPSGGGSESGSTFGSGGGYSSGAQGPSSLSPTPLFEE
DELGMIAGEGDSTGSGSISSSSSSSSMSSGSNHTALDVAARRAKMT
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