mRNA_L-elsbetiae_contig16949.4660.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig16949.4660.1
Unique Name	mRNA_L-elsbetiae_contig16949.4660.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 1.030e-170
Identity = 231/285 (81.05%), Postives = 252/285 (88.42%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            GSAPRWRPE EFDPQ LL VI  RSSNSGAGNDGQ FSHLKSIVN KIGREEFS A+S LWR+L++DPNAFPPEFWTLWKQSSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VAM+AQLVHQTGHWVVQTDCSNAFNT KRTAI+AQAAKS P LVGYIA+CYDEIPAKAIY MDSG R+ IECK GV QGDGMGPPLFCF +VPI+ KLR KY+  GV ++AYMDDI+L+FK  T   ++V+PDLVDELEAVGIIVNR K
Sbjct:   79 GSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 363

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 1.040e-169
Identity = 231/285 (81.05%), Postives = 253/285 (88.77%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            GSAPRWRPE EFDPQ LL VI SRSSNSGAGNDGQ FSHLKSIVNTKIGREEFS A+SSLWR+L++DPNAFPPEFWTLWKQSSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VAM+AQLV QTGHWVVQTDCSN  NT KRTAI+AQAAKS P LVG IA+CY E+PAKAIY MDSGER+ IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  GV ++AYMDDI+L+FK  T  +++V+PDLVDELEAVGIIVNR K
Sbjct:   34 GSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGK 317

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 1.690e-168
Identity = 237/285 (83.16%), Postives = 257/285 (90.18%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            GSAPRWRPE EFDPQ LL VI SRSSNSGAGNDGQ FSHLKSIVNTKIGREEFS A+SSLWR+L++DPNAFPPEFWTLWKQSSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VAM+AQLVHQTGHWVVQTDCSNAFNT KRTAI+AQAAKS P LVGYIA+CYDEIPAKAIY MDSGER+ IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  GV ++AYMDDI+L+FK  T   ++V+PDLVDELEAVGIIVNR K
Sbjct:  378 GSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 662

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 1.130e-164
Identity = 237/285 (83.16%), Postives = 257/285 (90.18%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            GSAPRWRPE EFDPQ LL VI SRSSNSGAGNDGQ FSHLKSIVNTKIGREEFS A+SSLWR+L++DPNAFPPEFWTLWKQSSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VAM+AQLVHQTGHWVVQTDCSNAFNT KRTAI+AQAAKS P LVGYIA+CYDEIPAKAIY MDSGER+ IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  GV ++AYMDDI+L+FK  T   ++V+PDLVDELEAVGIIVNR K
Sbjct:  357 GSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 641

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 483 bits (1242), Expect = 8.590e-164
Identity = 230/285 (80.70%), Postives = 253/285 (88.77%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            GSAPRWRPE EFDPQ LL V+  RSSNSGAGNDG  FSHLKSIVNTKIGREEFS A+SSLWR+L+ DP+AFPPEFWTL KQSSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VA++AQLVHQTGHWVVQTDCSNAFNT KRTAI+AQA+KS P LVGYIA+CYDEIPAKAIY MDSGER+ IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  GV ++AYMDDI+L+FK+ T   ++V PDLVDELEAVGIIVNR K
Sbjct:  356 GSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGK 640

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 462 bits (1189), Expect = 3.190e-157
Identity = 223/272 (81.99%), Postives = 244/272 (89.71%), Query Frame = 1

Query:   43 QALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDI-NLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            +A   VI SRSSNSGAGNDGQ FSHLKSIVNTKIGREEFS A+SSLWR+L++DPNAFPPEFWTLWKQSSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VAM+AQLVHQTGHWVVQTDCSNAFNT KRTAI+AQAAKS P LVGYIA+CYDEIPAKAIY MDSGER+ IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  GVR++AYMDDI +L+FK  T   ++V+PDLVDELEAVGIIVNR K
Sbjct:    2 EARNRVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 273

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 2.780e-154
Identity = 233/341 (68.33%), Postives = 254/341 (74.49%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLK-SIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSN-------------------------------------------------------AFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            GSAPRWRPE EFDPQ LL VI SRSSNSGAGNDGQ FSHL  SIVNTKIGREEFS A+SSLWR+L++DPNAFPPEFWTLWKQSSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVA  G VE+VAM+AQLVHQTGHWVVQTDCSN                                                       AFNT KRTAI+AQAAKS P LVGYIA+CYDEIPAKAIY MDSGER+ IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  GV ++AYMDDI+L+FK  T   ++V+PDLV+ELEAVGIIVNR K
Sbjct:  327 GSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGK 667

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 2.510e-150
Identity = 203/246 (82.52%), Postives = 221/246 (89.84%), Query Frame = 1

Query:   43 QALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETT 780
            Q LL V  SRSSNSGAGNDGQ FSHLKSIVNTK GREEFS A+SSLWR+L++DPNAFPPEFWTLWK+SSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VAM+AQLVHQTGHWVVQTDCSNAFNT KRTAI+AQAAKS P LVGYIA+CYDEIPAKAIY MDSGER+ IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  GV ++AYMDDI+L+FK  T
Sbjct:    3 QVLLQVTNSRSSNSGAGNDGQRFSHLKSIVNTKTGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNIT 248

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 4.370e-148
Identity = 218/285 (76.49%), Postives = 248/285 (87.02%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMDDINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK 855
            GSAPRWRPE EFDPQ L+ VI SRSSNSGAGNDGQ FSHLKSI NTKIGRE+F  A+SSLWR+LV+DPN FPPEFWTLWKQSSLIALGEKCRPVCIGM WRRL+ AG VR+WKPKLEE+FREA+QFGVAV GGVERVAMEAQLVHQTG+W++QTDCSNAFNT KRTAI+AQAAKS P LVGYIA+CYDEIPA A+YEMDSGER+ +EC SGV QGDGMGPPLF   ++PI+ KL+ KY+P GV  +AYMDDI L+ K+ TE +++ + DLVDEL  VGI+VNR K
Sbjct:  527 GSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAK 811

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BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 432 bits (1111), Expect = 1.810e-143
Identity = 203/242 (83.88%), Postives = 218/242 (90.08%), Query Frame = 1

Query:    1 GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGREEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAWRRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHWVVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDSGERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRG 726
            GSAPRWRPE EFDP+ LL VI SRSSN GAGNDG+ FSHLKSIVNTKIGREEFS A+SSLWR+L++DPNAFPPEFWTLWK SSLIALGEKCRPVCIGM WRRL+ AG VREWKPKLEE+FREADQFGVAV GGVE+VAM+AQLVHQTGHWVVQTDCSNAFNT KRTAI+AQAAKS P LVGYIA+CYDEIPAKAIY MDSGE + IECKSGV QGDGMGPPLFCF +VPIV KLR KY+  G
Sbjct:  364 GSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLG 605

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig16949.4660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KR59_9PHAE	1.030e-170	81.05	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KT19_9PHAE	1.040e-169	81.05	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JI32_9PHAE	1.690e-168	83.16	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KMQ2_9PHAE	1.130e-164	83.16	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KKQ2_9PHAE	8.590e-164	80.70	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LL14_9PHAE	3.190e-157	81.99	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KJC0_9PHAE	2.780e-154	68.33	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5L4Y4_9PHAE	2.510e-150	82.52	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JH58_9PHAE	4.370e-148	76.49	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KA96_9PHAE	1.810e-143	83.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig16949	contig	L-elsbetiae_contig16949:66..920 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Opisthokonta
Seed ortholog score	74.7
Seed ortholog evalue	7.7e-11
Seed eggNOG ortholog	400682.PAC_15701845
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs	39QPF@33154,KOG1075@1,KOG1075@2759
COG Functional cat.	S
Best tax level	Opisthokonta
Best eggNOG OG	NA\|NA\|NA
Exons	1
Model size	855
Cds size	855
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815704.4864895-CDS-L-elsbetiae_contig16949:65..920	1622815704.4864895-CDS-L-elsbetiae_contig16949:65..920	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig16949 66..920 -
1691683048.664028-CDS-L-elsbetiae_contig16949:65..920	1691683048.664028-CDS-L-elsbetiae_contig16949:65..920	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig16949 66..920 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig16949.4660.1	prot_L-elsbetiae_contig16949.4660.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig16949 66..920 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig16949:66..920-
coding sequence from alignment at L-elsbetiae_contig16949:66..920-

protein sequence of mRNA_L-elsbetiae_contig16949.4660.1

>prot_L-elsbetiae_contig16949.4660.1 ID=prot_L-elsbetiae_contig16949.4660.1|Name=mRNA_L-elsbetiae_contig16949.4660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp
GSAPRWRPEHEFDPQALLNVIKSRSSNSGAGNDGQHFSHLKSIVNTKIGR
EEFSQALSSLWRKLVDDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMAW
RRLMPAGIVREWKPKLEEVFREADQFGVAVPGGVERVAMEAQLVHQTGHW
VVQTDCSNAFNTAKRTAIIAQAAKSTPGLVGYIAKCYDEIPAKAIYEMDS
GERQVIECKSGVHQGDGMGPPLFCFAIVPIVSKLRVKYEPRGVRIEAYMD
DINLYFKETTEAAMEVVPDLVDELEAVGIIVNRRK

mRNA from alignment at L-elsbetiae_contig16949:66..920-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig16949.4660.1 ID=mRNA_L-elsbetiae_contig16949.4660.1|Name=mRNA_L-elsbetiae_contig16949.4660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=855bp|location=Sequence derived from alignment at L-elsbetiae_contig16949:66..920- (Laminarionema elsbetiae ELsaHSoW15)
GGGAGCGCCCCAAGATGGAGACCAGAACACGAGTTTGATCCGCAAGCGCT
CCTCAACGTCATCAAAAGCAGGAGCTCTAACTCCGGGGCGGGCAACGACG
GCCAGCATTTTTCCCACCTGAAGTCCATCGTCAACACCAAAATAGGACGA
GAAGAGTTTAGCCAGGCGTTGTCGTCACTCTGGAGGAAACTCGTAGACGA
CCCCAACGCGTTCCCGCCGGAATTCTGGACTCTTTGGAAACAGTCCAGTC
TCATAGCTCTTGGTGAGAAATGCCGGCCGGTATGCATTGGAATGGCATGG
AGAAGGCTGATGCCGGCAGGGATTGTCAGAGAGTGGAAACCAAAGCTAGA
GGAAGTGTTTCGGGAAGCTGACCAGTTTGGAGTGGCCGTGCCCGGAGGGG
TGGAACGAGTAGCGATGGAAGCGCAGCTAGTTCACCAGACTGGCCATTGG
GTAGTCCAGACGGACTGCTCCAACGCGTTCAACACAGCCAAACGCACCGC
CATAATAGCCCAGGCGGCGAAAAGCACCCCAGGGCTCGTCGGATACATAG
CAAAGTGCTACGACGAAATACCCGCCAAGGCGATATACGAGATGGATTCT
GGGGAACGTCAGGTGATTGAATGCAAGAGTGGTGTGCACCAGGGAGACGG
AATGGGACCGCCTCTGTTCTGCTTCGCCATCGTCCCAATTGTATCCAAGC
TTCGGGTCAAGTACGAACCCCGCGGGGTGCGTATTGAGGCCTATATGGAC
GACATCAACCTCTACTTCAAAGAAACCACGGAAGCCGCCATGGAGGTGGT
ACCAGACCTCGTCGACGAGCTTGAAGCAGTGGGCATCATAGTCAACAGAA
GGAAG

Coding sequence (CDS) from alignment at L-elsbetiae_contig16949:66..920-

>mRNA_L-elsbetiae_contig16949.4660.1 ID=mRNA_L-elsbetiae_contig16949.4660.1|Name=mRNA_L-elsbetiae_contig16949.4660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1710bp|location=Sequence derived from alignment at L-elsbetiae_contig16949:66..920- (Laminarionema elsbetiae ELsaHSoW15)
GGGAGCGCCCCAAGATGGAGACCAGAACACGAGTTTGATCCGCAAGCGCT
CCTCAACGTCATCAAAAGCAGGAGCTCTAACTCCGGGGCGGGCAACGACG
GCCAGCATTTTTCCCACCTGAAGTCCATCGTCAACACCAAAATAGGACGA
GAAGAGTTTAGCCAGGCGTTGTCGTCACTCTGGAGGAAACTCGTAGACGA
CCCCAACGCGTTCCCGCCGGAATTCTGGACTCTTTGGAAACAGTCCAGTC
TCATAGCTCTTGGTGAGAAATGCCGGCCGGTATGCATTGGAATGGCATGG
AGAAGGCTGATGCCGGCAGGGATTGTCAGAGAGTGGAAACCAAAGCTAGA
GGAAGTGTTTCGGGAAGCTGACCAGTTTGGAGTGGCCGTGCCCGGAGGGG
TGGAACGAGTAGCGATGGAAGCGCAGCTAGTTCACCAGACTGGCCATTGG
GTAGTCCAGACGGACTGCTCCAACGCGTTCAACACAGCCAAACGCACCGC
CATAATAGCCCAGGCGGCGAAAAGCACCCCAGGGCTCGTCGGATACATAG
CAAAGTGCTACGACGAAATACCCGCCAAGGCGATATACGAGATGGATTCT
GGGGAACGTCAGGTGATTGAATGCAAGAGTGGTGTGCACCAGGGAGACGG
AATGGGACCGCCTCTGTTCTGCTTCGCCATCGTCCCAATTGTATCCAAGC
TTCGGGTCAAGTACGAACCCCGCGGGGTGCGTATTGAGGCCTATATGGAC
GACATCAACCTCTACTTCAAAGAAACCACGGAAGCCGCCATGGAGGTGGT
ACCAGACCTCGTCGACGAGCTTGAAGCAGTGGGCATCATAGTCAACAGAA
GGAAGGGGAGCGCCCCAAGATGGAGACCAGAACACGAGTTTGATCCGCAA
GCGCTCCTCAACGTCATCAAAAGCAGGAGCTCTAACTCCGGGGCGGGCAA
CGACGGCCAGCATTTTTCCCACCTGAAGTCCATCGTCAACACCAAAATAG
GACGAGAAGAGTTTAGCCAGGCGTTGTCGTCACTCTGGAGGAAACTCGTA
GACGACCCCAACGCGTTCCCGCCGGAATTCTGGACTCTTTGGAAACAGTC
CAGTCTCATAGCTCTTGGTGAGAAATGCCGGCCGGTATGCATTGGAATGG
CATGGAGAAGGCTGATGCCGGCAGGGATTGTCAGAGAGTGGAAACCAAAG
CTAGAGGAAGTGTTTCGGGAAGCTGACCAGTTTGGAGTGGCCGTGCCCGG
AGGGGTGGAACGAGTAGCGATGGAAGCGCAGCTAGTTCACCAGACTGGCC
ATTGGGTAGTCCAGACGGACTGCTCCAACGCGTTCAACACAGCCAAACGC
ACCGCCATAATAGCCCAGGCGGCGAAAAGCACCCCAGGGCTCGTCGGATA
CATAGCAAAGTGCTACGACGAAATACCCGCCAAGGCGATATACGAGATGG
ATTCTGGGGAACGTCAGGTGATTGAATGCAAGAGTGGTGTGCACCAGGGA
GACGGAATGGGACCGCCTCTGTTCTGCTTCGCCATCGTCCCAATTGTATC
CAAGCTTCGGGTCAAGTACGAACCCCGCGGGGTGCGTATTGAGGCCTATA
TGGACGACATCAACCTCTACTTCAAAGAAACCACGGAAGCCGCCATGGAG
GTGGTACCAGACCTCGTCGACGAGCTTGAAGCAGTGGGCATCATAGTCAA
CAGAAGGAAG