mRNA_L-elsbetiae_contig16939.4651.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: D7FXU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU0_ECTSI) HSP 1 Score: 186 bits (472), Expect = 4.720e-57 Identity = 100/157 (63.69%), Postives = 111/157 (70.70%), Query Frame = 1 Query: 1 RPLLTKSLTAAVISVLGEIAASALRR--------------------------------LLRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWKV 375 RPLLTKS+T+A++S LGE+ SALR LLRRTAAFA FGL++NGPVFHWWYGALE AAARRRK GEPPGG GDI FKVA+DRFL+TPPYLAITL SLRLLQGLGAKRS+ ET ALYRG L TNWK+ Sbjct: 56 RPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSALYRGVLFTNWKI 212
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: A0A6H5L3A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A8_9PHAE) HSP 1 Score: 185 bits (469), Expect = 3.140e-56 Identity = 101/156 (64.74%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 1 RPLLTKSLTAAVISVLGEIAASALRR--------------------------------LLRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWK 372 RPLLTKS+T+A++S LGE+A SALR LLRRTAAFA FGL++NGPVFHWWYGALERAAARRRK GE PGG GDI FKVA+DRFL+TPPYLAITL SLRLLQGLGAKRS+ ET ALYRG L TNWK Sbjct: 50 RPLLTKSVTSALVSALGELAGSALRSSSPPPLPVGAGTALAVKGRAGAGQRTGTAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALERAAARRRKAGELPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIDETSALYRGVLFTNWK 205
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: A0A836CQ06_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ06_9STRA) HSP 1 Score: 110 bits (275), Expect = 4.620e-28 Identity = 63/131 (48.09%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 4 PLLTKSLTAAVISVLGEIAASALRRL--------LRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWK 372 PL TK++TAA + +GE+ + LR+ L+R AF FGLV+NGPVFH+WYG LE+ A RK + GG I FK+ LDR LLTPPYLA+TL LR LQ ++ +R +Y+ AL+TNWK Sbjct: 43 PLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: A0A836CBT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT9_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.270e-24 Identity = 61/132 (46.21%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 4 PLLTKSLTAAVISVLGEIAASAL--------RRLLRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWKV 375 PLLTKS+TA++++ GE S L R RR AFA FGLV+NGP FH+WY LE+ A R K GG I FKV +DR L+TPPYL +TL LR LQ +L +Y+ AL+ NWK+ Sbjct: 37 PLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLT---GGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKL 165
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: A0A6G0XN93_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XN93_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.160e-18 Identity = 51/131 (38.93%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 1 RPLLTKSLTAAVISVLGEIAASALRRL------LRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWKV 375 RPL TK+LT+A + + GEI A L++ LRR AF FG + GP+ H+WYG LE+ R K P K+ LDR +LTPP++A+T+ +L +L G + + + RA Y L NW+V Sbjct: 22 RPLRTKALTSASMGICGEILAHVLKKKPIYTVSLRRVLAFGVFGGAITGPLMHFWYGVLEQVRTRDDKSLTP-------MQKLFLDRLVLTPPFVALTIFALGVLNGASVQAARSNVRATYFSTLFMNWRV 145
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: A0A485LPX3_9STRA (Aste57867_24163 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.220e-17 Identity = 51/133 (38.35%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 1 RPLLTKSLTAAVISVLGEIAASALRRL------LRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRK--PGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWKV 375 +PL TK+ T+A + V GE+ A L++ RR AF +G V+ GP+ H+WYG LER + K P + K+ +DR LLTPP++A+T+ L +L G A + A RA+Y L+ NWKV Sbjct: 22 KPLQTKAATSAAMGVCGEVLAHTLKKKPIYTVSFRRMLAFGLYGGVVTGPIMHYWYGFLERMRSGGNKLTPTQ----------KLLMDRLLLTPPFVALTILMLGVLNGASATAARANLRAVYWTTLLMNWKV 144
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: W7TTQ5_9STRA (Peroxisomal membrane protein 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTQ5_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.600e-16 Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 1 RPLLTKSLTAAVISVLGEIAASALR----RLLRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWKV 375 RP+LTK+LT+AVIS LG+I AS+ + R RRT F FG ++ GP+ H+WYG LE+ + G ++A KV LD+ L TPP+LA+TL LRLL+ + + +Y L TN +V Sbjct: 68 RPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQ-------GGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQV 189
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: A0A1W0AAY0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAY0_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.650e-16 Identity = 52/127 (40.94%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 13 TKSLTAAVISVLGEIAASALRRL------LRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWKV 375 TK+LT+A I V+GEI A L+ RR AAF +G V+ P+ H WYG LE+ G + K+ LDR +LTPP+L IT+T L LL G K + R Y AL+ NWKV Sbjct: 10 TKALTSASIGVVGEIIAHGLKNKSLNGLSTRRMAAFGLYGGVMTAPIMHLWYGFLEKYRVN--------GKSLSPTLKLLLDRLVLTPPFLTITMTCLSLLTGSTIKSTKELLRRNYVAALMMNWKV 128
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: A0A067D856_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D856_SAPPC) HSP 1 Score: 79.3 bits (194), Expect = 4.670e-16 Identity = 55/131 (41.98%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 1 RPLLTKSLTAAVISVLGEIAASALRRL------LRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWKV 375 RPL TK++T+AV+ GEI A L+ L+R FA + + PV H WYG LE+ R G+ G K+ LDR LLTPP+LA+TL +L LL G S A R+ Y AL NWKV Sbjct: 21 RPLQTKAITSAVMGASGEIVAHGLKYKSLQGLSLQRVLVFALYSGGITAPVMHAWYGFLEQCRVR----GDRLSNNG----KLLLDRLLLTPPFLALTLFALSLLTGASVAASKALVRSKYVTALWMNWKV 143
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Match: UPI001B88D8BB (peroxisomal membrane protein 2-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88D8BB) HSP 1 Score: 65.9 bits (159), Expect = 9.750e-11 Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 1 RPLLTKSLTAAVISVLGEIAASAL--------RRLLRRTAAFAFFGLVLNGPVFHWWYGALERAAARRRKPGEPPGGTGDIAFKVALDRFLLTPPYLAITLTSLRLLQGLGAKRSLAETRALYRGALVTNWK 372 RP+LTK++T+A IS LG I + + + R ++A FG ++GPV H WY LE ++ + + K+ DR L TPP++ L + +L+G G K ++ + +Y L TNWK Sbjct: 26 RPVLTKAITSACISSLGNILSQLIVPSSQLGNKIAWRSVLSYASFGFFISGPVVHHWYRLLEHLGGSKKD-------STVVIKKILADRLLFTPPFIFTFLYVISILEGHGHKGAMHRIKEVYWYILKTNWK 150 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16939.4651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16939.4651.1 >prot_L-elsbetiae_contig16939.4651.1 ID=prot_L-elsbetiae_contig16939.4651.1|Name=mRNA_L-elsbetiae_contig16939.4651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp RPLLTKSLTAAVISVLGEIAASALRRLLRRTAAFAFFGLVLNGPVFHWWYback to top mRNA from alignment at L-elsbetiae_contig16939:2177..3267- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16939.4651.1 ID=mRNA_L-elsbetiae_contig16939.4651.1|Name=mRNA_L-elsbetiae_contig16939.4651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1091bp|location=Sequence derived from alignment at L-elsbetiae_contig16939:2177..3267- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16939:2177..3267- >mRNA_L-elsbetiae_contig16939.4651.1 ID=mRNA_L-elsbetiae_contig16939.4651.1|Name=mRNA_L-elsbetiae_contig16939.4651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig16939:2177..3267- (Laminarionema elsbetiae ELsaHSoW15)back to top |