mRNA_L-elsbetiae_contig1693.4646.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 106 bits (265), Expect = 3.450e-21 Identity = 48/58 (82.76%), Postives = 49/58 (84.48%), Query Frame = -2 Query: 195 GDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCHGKT 368 GD IFKLVC RATPE WAEWLR PLE+AAGT N DLVDKLL AGAN AGWRGCHGKT Sbjct: 15 GDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKT 72
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: D7G2A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A9_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 8.590e-20 Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = -2 Query: 204 GDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCH 368 GD IFKLVC R T E W+EWLR PLE+AA TAN++LV KLLRAGANG A WRGCH Sbjct: 10 GDTIFKLVCDRVTAEQWSEWLRAPLEHAAATANYELVSKLLRAGANGGASWRGCH 64
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 100 bits (248), Expect = 1.010e-19 Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = -2 Query: 195 GDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCHGKT 368 GD FKLV RATP+ WAEWLR PLE+AA T N DLVDKLL AGANG AGWRGCHGKT Sbjct: 57 GDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKT 114
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 2.470e-19 Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = -2 Query: 195 AGDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCHGKT 371 A DMIFKL+C RAT E W EWLR PLE+AAGTAN DLV+KLL+AGA+GSAGWRGC T Sbjct: 18 AADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNT 76
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.150e-18 Identity = 44/60 (73.33%), Postives = 48/60 (80.00%), Query Frame = -2 Query: 195 GAGDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCHGKT 374 G+ D F+LVC RATPE WAEWLR PLE+AA TA+HDLV KLL AGANGS GW GC GKT Sbjct: 16 GSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKT 75
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.330e-18 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = -2 Query: 195 AGDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCHGKT 371 A +IFKL+C RAT E WAEWLR PLE+AAGTAN DLV+KLL+AGA+GSAGWRGC KT Sbjct: 18 AAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKT 76
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.600e-17 Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = -2 Query: 195 AGDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCHGKT 371 A DMIF+L+C RAT E WAEWLR PLE+AAGTAN DLV+KLL+AGANGSAG RGC T Sbjct: 20 AADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNT 78
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 4.760e-17 Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = -2 Query: 195 GAGDMIFKLVCARATPE*WAEWLRVPLEYAAGTANHDLVDKLLRAGANGSAGWRGCHGKT 374 G GDMI LVC ATP W +WLRVPLE+AAGT N LV+KLL+ GAN SAGWRGC G+T Sbjct: 13 GTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRT 72
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 2.960e-15 Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 1150 VVPPLAEAAGEDRPRLERLSKLLANAPQDSVWRRRGFVAMHRAHPDKVRLVGEILGAEAEVVDAEAGIIGQPQQRPRRHATRGQVKV 1410 V+ +AEA RP LERLS+LLA APQD WRRRGF+ + R HPD+VRL EI A A+ + QPQQRPRR A+ GQV+V Sbjct: 234 VMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATE-------QPQQRPRRRASTGQVEV 313
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 7.550e-15 Identity = 48/86 (55.81%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 1144 SAVVPPLAEAAGEDRPRLERLSKLLANAPQDSVWRRRGFVAMHRAHPDKVRLVGEILGAEAEVVDAEAGIIGQPQQRPRRHATRGQ 1401 S +P +AEAA ED RLERLSKLL APQD WRRRGF+A+ RAHPD++RLV EI + D +G Q Q+RP R A +GQ Sbjct: 317 SEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEI----PKTADEASGKQPQEQERPSRRARKGQ 398 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1693.4646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1693.4646.1 >prot_L-elsbetiae_contig1693.4646.1 ID=prot_L-elsbetiae_contig1693.4646.1|Name=mRNA_L-elsbetiae_contig1693.4646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp MLGSCAAMLSLLQLGANVHTKTTNGYTPLHSACEEGKAEAADLLLRWGADback to top mRNA from alignment at L-elsbetiae_contig1693:15934..17346+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1693.4646.1 ID=mRNA_L-elsbetiae_contig1693.4646.1|Name=mRNA_L-elsbetiae_contig1693.4646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1413bp|location=Sequence derived from alignment at L-elsbetiae_contig1693:15934..17346+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1693:15934..17346+ >mRNA_L-elsbetiae_contig1693.4646.1 ID=mRNA_L-elsbetiae_contig1693.4646.1|Name=mRNA_L-elsbetiae_contig1693.4646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=906bp|location=Sequence derived from alignment at L-elsbetiae_contig1693:15934..17346+ (Laminarionema elsbetiae ELsaHSoW15)back to top |