mRNA_L-elsbetiae_contig16913.4635.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Match: A0A6H5KBR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR1_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 2.360e-16 Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 1 IEGAPESKGRVVVSGGXXXXXGDGRERPFYLFPSALDDDVVVRYFRGVWPSNGNSAPTSTGASTGRGPSLGPMLDGAVATKGDTSARMKVVRAAAQIVRADVKLQGCLLNAPGKGRPHQYGEELAMPVKLPREALLDFPLTLVGLVQDVTGIPLRREVVD 480 I A S+ RVV S G GDGR+R LFP D+V+ +N P++ +T G + ++ + + ARM++VRAAA+IVRADV L N+ + + H+Y ELA PVK R+AL + P TLVGL Q T +PL ++ D Sbjct: 207 IASADGSQARVVSSEGGF---GDGRQRILCLFPVNARDEVIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEAKEADARMEIVRAAAEIVRADVDQHSDLKNSGIRRQKHKYSVELAAPVKPVRDALAEMPPTLVGLFQGSTNMPLYPKITD 363
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Match: A0A6H5JUC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC7_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.310e-14 Identity = 58/148 (39.19%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 1 IEGAPESKGRVVVSGGXXXXXGDGRERPFYLFPSALDDDVVVRYFRGVWPSNGNSAPTSTGASTGRGPSLGPMLDGAVATKGDTSARMKVVRAAAQIVRADVKLQGCLLNAPGKGRPHQYGEELAMPVKLPREALLDFPLTLVGLVQD 444 I A S+ RVV S G GDGR+R LFP D+V+ +N P++ +T G + ++ + + ARM++VRAAA+IVRADV L NA + + H+Y ELA PVK R+AL + P TLVGL QD Sbjct: 329 IASADGSQARVVSSEGGF---GDGRQRLLCLFPVNARDEVIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEAKEADARMEIVRAAAEIVRADVDQHPDLKNARIRRQKHKYSVELAAPVKPVRDALAEMPPTLVGLFQD 473
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Match: A0A6H5JUI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI8_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 3.800e-14 Identity = 57/160 (35.62%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 1 IEGAPESKGRVVVSGGXXXXXGDGRERPFYLFPSALDDDVVVRYFRGVWPSNGNSAPTSTGASTGRGPSLGPMLDGAVATKGDTSARMKVVRAAAQIVRADVKLQGCLLNAPGKGRPHQYGEELAMPVKLPREALLDFPLTLVGLVQDVTGIPLRREVVD 480 + A + RVV S G G GR+R LFP D + +N P++ +T G + ++ + + AR ++VRAAA+IVRADV L NA + + H+Y ELA PVK R+AL + P TLVGL Q +T +PL E+ D Sbjct: 5 VASADGGQARVVSSEGGF---GHGRQRLLCLFPVNARDKAIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEAKEADARTEIVRAAAEIVRADVDQHPDLKNARIRRQKHKYSVELAAPVKPVRDALAEMPPTLVGLFQGMTNMPLYPEITD 161
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Match: A0A6H5K178_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K178_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.090e-13 Identity = 57/148 (38.51%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 1 IEGAPESKGRVVVSGGXXXXXGDGRERPFYLFPSALDDDVVVRYFRGVWPSNGNSAPTSTGASTGRGPSLGPMLDGAVATKGDTSARMKVVRAAAQIVRADVKLQGCLLNAPGKGRPHQYGEELAMPVKLPREALLDFPLTLVGLVQD 444 I A S+ RVV S G GDGR+R LFP D+V+ +N P++ +T G + ++ + + ARM++VRAAA+IVRADV L NA + + H++ ELA PVK R+AL + P TLVGL QD Sbjct: 329 IASADGSQARVVSSEGGF---GDGRQRLLCLFPVNARDEVIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEAKEADARMEIVRAAAEIVRADVDQHPDLKNARIRRQKHKFCVELAAPVKPVRDALAEMPPTLVGLFQD 473
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Match: A0A6H5K9G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G2_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 4.160e-12 Identity = 55/147 (37.41%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 1 IEGAPESKGRVVVSGGXXXXXGDGRERPFYLFPSALDDDVVVRYFRGVWPSNGNSAPTSTGASTGRGPSLGPMLDGAVATKGDTSARMKVVRAAAQIVRADVKLQGCLLNAPGKGRPHQYGEELAMPVKLPREALLDFPLTLVGLVQ 441 I A S+ RVV S G GDGR+R LFP D+V+ +N P++ +T G + ++ + + ARM++V AAA+IVRADV L N + + H+Y ELA PVK R AL + P TLVGL Q Sbjct: 5 IASADGSQARVVSSEGGF---GDGRQRLLCLFPVNARDEVIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEAKEADARMEIVLAAAEIVRADVDQHPDLKNVRIRRQKHKYSVELAAPVKTVRGALAEMPPTLVGLFQ 148
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Match: A0A6H5KNV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV6_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 7.270e-12 Identity = 58/149 (38.93%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 1 IEGAPESKGRVVVSGGXXXXXGDGRERPFYLFPSALDDDVVVRY-FRGVWPSNGNSAPTSTGASTGRGPSLGPMLDGAVATKGDTSARMKVVRAAAQIVRADVKLQGCLLNAPGKGRPHQYGEELAMPVKLPREALLDFPLTLVGLVQD 444 I A S+ RVV S G GDGR+R LFP D+V+ R + T A++G SL ++ + + ARM +VRAAA+IVRADV L NA + + H++ ELA PVK R+AL + P TLVGL Q+ Sbjct: 5 IASADGSQARVVSSEGGF---GDGRQRLLCLFPVNARDEVIASLAVRARLAKTFDGTSTPANATSGGNTSL-QIVRRLLQEAKEADARMWIVRAAAEIVRADVDQHPDLKNARIRRQKHKFCVELAAPVKPVRDALAEMPPTLVGLFQE 149
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Match: A0A6H5L193_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L193_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 3.600e-7 Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 247 DTSARMKVVRAAAQIVRADVKLQGCLLNAPGKGRPHQYGEELAMPVKLPREALLDFPLTLVGLVQDVTGIPLRREVVDSERGS 495 + ARM++VRAAA+IVRA V L NA + + H+Y ELA PVK R+AL + P TL+GL +D R V + GS Sbjct: 392 EADARMEIVRAAAEIVRAYVDQHPDLKNARLRRKKHKYSVELAAPVKPVRDALAEMPPTLIGLFRDGPQPSAARSVRREDDGS 474 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16913.4635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16913.4635.1 >prot_L-elsbetiae_contig16913.4635.1 ID=prot_L-elsbetiae_contig16913.4635.1|Name=mRNA_L-elsbetiae_contig16913.4635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp IEGAPESKGRVVVSGGGAAGGGDGRERPFYLFPSALDDDVVVRYFRGVWPback to top mRNA from alignment at L-elsbetiae_contig16913:2091..2640+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16913.4635.1 ID=mRNA_L-elsbetiae_contig16913.4635.1|Name=mRNA_L-elsbetiae_contig16913.4635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=550bp|location=Sequence derived from alignment at L-elsbetiae_contig16913:2091..2640+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16913:2091..2640+ >mRNA_L-elsbetiae_contig16913.4635.1 ID=mRNA_L-elsbetiae_contig16913.4635.1|Name=mRNA_L-elsbetiae_contig16913.4635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig16913:2091..2640+ (Laminarionema elsbetiae ELsaHSoW15)back to top |