prot_L-elsbetiae_contig1691.4631.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1691.4631.1
Unique Nameprot_L-elsbetiae_contig1691.4631.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length303
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1691.4631.1 vs. uniprot
Match: D7FSB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB9_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 3.000e-60
Identity = 145/332 (43.67%), Postives = 185/332 (55.72%), Query Frame = 0 
Query:    1 MAKSRLAVIQDDILAVKHALANKLSFEGLEGQQLNHVLQTLLAQRAEASTASPSCSGG-----GXXXXXXXXXXXXXXXXXTVSRVPVAGASSKAAAAKIRGKKK-KIPSPXXXXXXXX----------------------SPAKKPRTTPPK-KSPSSAKTPAP---EKRRQASSGKAXXXXXXXXXXXXXPPAAKTPVPEXXXXXXXXXXXXNLDRLRQMRKGIKIGDTVSVLMDVNVRGSWELEWAEGEVTREMNRSGIFQIAYDKHRFGKQGCAQVKQEPSMTGESPLRWIHEQRLQIDHPNFFCGQGGPPPVGIDNSRPRGAWFLHQ 300
            M KS+L VIQDDILAVKHALAN +++EGL+G QL  VL TL +QRA+ +T + +         G                  +SRVPV G+ +KA +AK   KK   I +P XXXXXXX                      +PAK+    PPK KSP     PAP   + ++QAS+                   A+ PV +                LR++RK +K+GD VSVL DV++RG+WE  W +GEV REMNRSGIFQIA+D  R G++    VK EP   GE   RW+HEQRL I+HP+FFCGQG  PP+GIDN RP+GAW+LHQ
Sbjct:    1 MEKSKLEVIQDDILAVKHALANNIAYEGLQGDQLKTVLSTLFSQRAQQTTEAATAXXXXXXXXGETASFAAAGGPQGNGPTNMSRVPVNGSRAKAVSAKKSSKKPANITTPAXXXXXXXXXXXXXXXXDTQQTKEVADEETAPAKQ--APPPKSKSPKRQHNPAPRPAQGKKQAST-------------------AEKPVAKKRKTSFGVV-------LRELRKSVKVGDFVSVLGDVSLRGTWEKVWVKGEVVREMNRSGIFQIAFDHDRQGQRSA--VKTEPGSNGEDE-RWVHEQRLSIEHPDFFCGQGDSPPIGIDNLRPKGAWYLHQ 301
[Close]
BLAST of mRNA_L-elsbetiae_contig1691.4631.1 vs. uniprot
Match: A0A6H5KF34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF34_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 7.460e-7
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:  187 LRQMRKGIKIGDTVSVLMDVNVRGSWELEWAEGEVTREM 225
            LR++RK IK+GD VSVL DV++RGSWE  W +GEV REM
Sbjct:  108 LRELRKSIKVGDFVSVLGDVSLRGSWEKVWIKGEVVREM 146
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1691.4631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSB9_ECTSI3.000e-6043.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF34_9PHAE7.460e-766.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1691contigL-elsbetiae_contig1691:6200..8766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1691.4631.1mRNA_L-elsbetiae_contig1691.4631.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1691 6200..8793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1691.4631.1 ID=prot_L-elsbetiae_contig1691.4631.1|Name=mRNA_L-elsbetiae_contig1691.4631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp
MAKSRLAVIQDDILAVKHALANKLSFEGLEGQQLNHVLQTLLAQRAEAST
ASPSCSGGGSSGGSSGGSSGGSSTSSTVSRVPVAGASSKAAAAKIRGKKK
KIPSPSEAAAAPASPAKKPRTTPPKKSPSSAKTPAPEKRRQASSGKAAKK
PRTTPPKKSPPPAAKTPVPEQASSGKAARKPRNLDRLRQMRKGIKIGDTV
SVLMDVNVRGSWELEWAEGEVTREMNRSGIFQIAYDKHRFGKQGCAQVKQ
EPSMTGESPLRWIHEQRLQIDHPNFFCGQGGPPPVGIDNSRPRGAWFLHQ
RAA
back to top