mRNA_L-elsbetiae_contig169.4622.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 1.730e-11 Identity = 49/132 (37.12%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 25 DAFSVALNQMHMTGEGWFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAADGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTWMLPTSRLKDAGPGFASVESLFLG-SVNFRSSRVAWPRGLKKL 417 DA +ALNQ+ GW+ S ++LQ+ S+Q C+ACR L V D LW T + + G R P+ R VTW L T ++ G F SV+ L G S ++R RV WP GLKKL Sbjct: 17 DALDIALNQVSGVN-GWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRS------RLVSLGQSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGDSFDYRVDRVTWPPGLKKL 141
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 7.360e-9 Identity = 51/134 (38.06%), Postives = 67/134 (50.00%), Query Frame = 1 Query: 37 VALNQMHMTGEGWFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAA--DGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTWMLPTSRLKDAGP-GFASVESLFLGSVNFRSSR----VAWPRGLKKL 417 VALN+ + G+ W+ S ++LQ+ SV+FCVACR+ S L L V TP LWA D R+ +VR P R VTW LP S L +A F ++E + RS VA PRGLK + Sbjct: 2 VALNETY-GGKQWYISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASKDAFKNLECMSFSDAVERSGDSFDGVALPRGLKSV 134
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 1.950e-7 Identity = 51/151 (33.77%), Postives = 71/151 (47.02%), Query Frame = 1 Query: 19 CLDAFSVALNQMHMTGEGWFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAADGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTWMLPT-SRLKDAGPGFASVESLFLGSVNFRS-SRVAWPRGLKKLELATS--FNQNLKGFS 459 CL +VALN+ G+ W+ S ELQ+ S++ C+ACR + L L V TP RL AA P + + T V R + R TW +PT S ++ + V+ L G S + WPR LK +E S N+ L G S Sbjct: 136 CLKTLTVALNET-CDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAA-----ADAPSPHPKRLCGTRVPRLRA---RRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVS 277
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: D7G3G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G0_ECTSI) HSP 1 Score: 58.5 bits (140), Expect = 2.730e-7 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 7 GTGRCLDAFSVALNQMHMTGEG-WFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTR 180 G +CLDAF VALNQ E W+AS +ELQ+VS++FC ACR F L +RV TP + Sbjct: 5 GRRKCLDAFIVALNQTCDGRENRWYASTLELQLVSLKFCGACRRFPTLHVRVDRQTPRK 63
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 5.240e-7 Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 1 Query: 19 CLDAFSVALNQMHMTGEGWFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAADGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTW-MLPTSRLKDAGPGFASVESL-FLGSVNFRSSRVAWPRGLKKLE-LATS-FNQNLK 450 CL + VALN+ G W+ S ELQ S++FC+ACR + + L+V P L AA P + + T V R + R+VTW M + L + V+ L F G+ + V WPR LK +E L TS FNQ L+ Sbjct: 14 CLSSLIVALNET-CDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAA-----ADAPPPHPKRLCWTRVPRLRA---RSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLE 152
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 5.890e-7 Identity = 50/142 (35.21%), Postives = 65/142 (45.77%), Query Frame = 1 Query: 7 GTGRCLDAFSVALNQMHMTGEG-WFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAADGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTWMLPTSRL--KDAGPGFASVESLFLGSVNFRSS--RVAWPRGLKKL 417 G G LD VALNQ E W+ S +ELQ+VS++ C ACR+ L + V DTP LW++ TP EV + R P+ TW LP RL + A E +F +S V WP LK+L Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSR--TSRTTPSQRSPEVCTSN--RVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRL 222
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 6.060e-7 Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 1 Query: 16 RCLDAFSVALNQMHMTGEG----WFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWA 189 +CLDAF VALNQ T +G W+AS +ELQ+VS++FC ACR L +RV TP LW+ Sbjct: 40 KCLDAFVVALNQ---TCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWS 98
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 7.030e-7 Identity = 48/135 (35.56%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 64 GEGWFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAADGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTWMLPTS-RLKDAGPGFASVESLFLGSVNFRSS--RVAWPRGLKKLELA--TSFNQNLKG 453 G+ W+ S ELQ S++FC+ACR + L LRV TP L AA P + RT V R + R V W +PT+ LK V L G F S VAWP+ LK+++ + + FNQ ++G Sbjct: 4 GKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAA-----VDAPSPHSKRPCRTRVPRLRA---RRVIWNMPTATELKSPIFALKDVVRLDFGPA-FEGSLESVAWPQRLKEIDFSWGSLFNQPIEG 129
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 9.530e-7 Identity = 49/138 (35.51%), Postives = 68/138 (49.28%), Query Frame = 1 Query: 37 VALNQMHMTGEGWFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAADGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTWMLPTS-RLKDAGPGFASVESLFLGSV-NFRSSRVAWPRGLKKLELATS-FNQ 441 +ALN+M G+ W+ S ELQ+ S++FC+ACR + L+L+V TP L AA P + RT V R + R V W +PT+ L+ V L G V N V WP LK++ +S FNQ Sbjct: 23 LALNEM-CDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAA-----VDAPPPHTKRPCRTRVPRLRA---RRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSSEFNQ 151
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 3.030e-6 Identity = 46/136 (33.82%), Postives = 64/136 (47.06%), Query Frame = 1 Query: 19 CLDAFSVALNQMHMTGEGWFASIMELQVVSVQFCVACRTFSRLDLRVGGDTPTRLWAADGVLDTGTPGDYGTEVARTGVVRFPSPFVRTVTWMLPTS-RLKDAGPGFASVESLFLGSVNFRS-SRVAWPRGLKKLE 420 CL+A VALN+ G+ W+ S ELQ+ S+ FC+ACR + L V P RL A+ P + + T V R S R VTW +PT+ +L+ +E L G S V WP L+ +E Sbjct: 51 CLEALIVALNET-CDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLAS-----ADAPPPHPKRLCWTRVPRLRS---RRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTME 177 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig169.4622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig169.4622.1 >prot_L-elsbetiae_contig169.4622.1 ID=prot_L-elsbetiae_contig169.4622.1|Name=mRNA_L-elsbetiae_contig169.4622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=741bp SAGTGRCLDAFSVALNQMHMTGEGWFASIMELQVVSVQFCVACRTFSRLDback to top mRNA from alignment at L-elsbetiae_contig169:3084..6394+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig169.4622.1 ID=mRNA_L-elsbetiae_contig169.4622.1|Name=mRNA_L-elsbetiae_contig169.4622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3311bp|location=Sequence derived from alignment at L-elsbetiae_contig169:3084..6394+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig169:3084..6394+ >mRNA_L-elsbetiae_contig169.4622.1 ID=mRNA_L-elsbetiae_contig169.4622.1|Name=mRNA_L-elsbetiae_contig169.4622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4446bp|location=Sequence derived from alignment at L-elsbetiae_contig169:3084..6394+ (Laminarionema elsbetiae ELsaHSoW15)back to top |