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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 4 |
Model size | 1452 |
Cds size | 306 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815701.3214865-UTR-L-elsbetiae_contig1688:8567..9582 | 1622815701.3214865-UTR-L-elsbetiae_contig1688:8567..9582 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1688 8568..9582 - |
1691683046.8836792-UTR-L-elsbetiae_contig1688:8567..9582 | 1691683046.8836792-UTR-L-elsbetiae_contig1688:8567..9582 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1688 8568..9582 - |
1622815701.3342657-UTR-L-elsbetiae_contig1688:9900..9939 | 1622815701.3342657-UTR-L-elsbetiae_contig1688:9900..9939 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1688 9901..9939 - |
1691683046.8932076-UTR-L-elsbetiae_contig1688:9900..9939 | 1691683046.8932076-UTR-L-elsbetiae_contig1688:9900..9939 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1688 9901..9939 - |
1622815701.3834786-UTR-L-elsbetiae_contig1688:11091..11183 | 1622815701.3834786-UTR-L-elsbetiae_contig1688:11091..11183 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1688 11092..11183 - |
1691683046.9359539-UTR-L-elsbetiae_contig1688:11091..11183 | 1691683046.9359539-UTR-L-elsbetiae_contig1688:11091..11183 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1688 11092..11183 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815701.3498101-CDS-L-elsbetiae_contig1688:9939..10047 | 1622815701.3498101-CDS-L-elsbetiae_contig1688:9939..10047 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1688 9940..10047 - |
1691683046.9029667-CDS-L-elsbetiae_contig1688:9939..10047 | 1691683046.9029667-CDS-L-elsbetiae_contig1688:9939..10047 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1688 9940..10047 - |
1622815701.3607092-CDS-L-elsbetiae_contig1688:10369..10489 | 1622815701.3607092-CDS-L-elsbetiae_contig1688:10369..10489 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1688 10370..10489 - |
1691683046.9121318-CDS-L-elsbetiae_contig1688:10369..10489 | 1691683046.9121318-CDS-L-elsbetiae_contig1688:10369..10489 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1688 10370..10489 - |
1622815701.3713596-CDS-L-elsbetiae_contig1688:11013..11091 | 1622815701.3713596-CDS-L-elsbetiae_contig1688:11013..11091 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1688 11014..11091 - |
1691683046.9232373-CDS-L-elsbetiae_contig1688:11013..11091 | 1691683046.9232373-CDS-L-elsbetiae_contig1688:11013..11091 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1688 11014..11091 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1688.4616.1 >prot_L-elsbetiae_contig1688.4616.1 ID=prot_L-elsbetiae_contig1688.4616.1|Name=mRNA_L-elsbetiae_contig1688.4616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
MFGLAFQKNALIEVLWQVEIRPSGKMEKRWLAGSVDLIDMNRTGQVLGQP LWNIHYKRQGTIPASKPGCVLEQGQAEGHAEMRQRQRILGGPAPFLEAEA A* back to topmRNA from alignment at L-elsbetiae_contig1688:8568..11183- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1688.4616.1 ID=mRNA_L-elsbetiae_contig1688.4616.1|Name=mRNA_L-elsbetiae_contig1688.4616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2616bp|location=Sequence derived from alignment at L-elsbetiae_contig1688:8568..11183- (Laminarionema elsbetiae ELsaHSoW15) GTGGGCCCGTGGGTGATGGCACGGCGGGTGCCAAGAAGAGGCCGACTCAC
AAGAAGAAGGTCTGGCATGCTGGTCGGAGCGCGCCGCCAACCATGTTCGG
TCTCGCTTTCCAAAAGAACGCGTTGATAGAGGTCCTGTGGCAAGTGGAAA
TCAGGCCTAGCGGCAAGATGGTGAGATGGTTTCGTCAGGAGGTTGGGGGT
CACTGTTTGTTTTTGTCGTAACCACCAGGACATCGCGTGCGCGCCGAAGG
GCCTCAAACGGAAGATGGAGATTTCCCTGGTCAATGTTATGATCTGGGGG
CCACTGTTTGTTTTTGTCGTAACCACCAGGACATCGCGTGCGCGCCGAAG
CGCCTCAAACGGAAGATGGAGATTTTGCTGGTCAATGTTATGATCCGTGC
TGTTATCTCCTTTGCTTATCGATTACCACTTCGTAGCACTTCCAGCCTAG
GGTGCGAGTGTTGGCGGCGACGGCAACCACGAGCACGATCTCGGTCGCTT
GCGGTCTCATGGCTAGACGTGGTGTTAAATCATGATCAGGGGTCAAACTA
GATGCTACGTGCGTAGCTCGAAACAAACCTAGCAGTTAGTTCACTTCTAC
CTTTGCGATTTGGTGTTGGGGCCAGACGTCGTACAAGTAGAGATTATCCT
TACCGGGCATATCCTCTCTCCTGTCCGCTGTGAAACAATAATAGGAAAAG
CGGTGGCTCGCTGGCTCTGTGGACCTCATCGACATGAACAGGACAGGTCA
AGTCCTCGGTCAACCTCTGTGGAACATTCACTACAAACGCCAGGGCACAA
TCCCGGCCTCGAAGGCATGGCAGGAGCGCGAGCACCCCACGAATTTGCCG
ATATCGAACCCCGAGACCGAAACGGTTTGATAATTCTTAGCCTGTGCGAC
ACACAGGCGAAATACGCGTGTAGAGGCGGCGGCTACTGTTGCTGTCGATC
GGTGTGTTGTACACCCAGAGTGGCAGCTTGGAAAGCGTGTCGGACGGTTG
AATACGGACATAGCGGCGGAGTTCGTCATCATGCCAGGCGTTCCTTGCCG
TCGACCGTTGGTGCATGATCGGCGTGGGTTGCATTTCATAGCTCCTGCCC
CGAATGCTCTCCGCATACTGTTTTTTGCCGCCACAGCCAGGTTGCGTTCT
TGAGCAAGGACAAGCTGAGGGACATGCTGAGATGAGACAAAGACAAAGGA
TCTTGGGAGGGCCAGCCCCTTTCCTGGAGGCCGAAGCAGCGTGAGGCGTA
GGCTATCAATGCGCTGGATGTATTCTCCGAAAGGTGAAGAGTTGGAGATC
ACACTGGCTGCGCCCGGTTCGATGGGCAGTAAATTGTTACCTCCTCGAAC
CATCACGATATTGTTTGAATTATATTCATGGTGTGGGCAGACGTTTATTC
AGCGAACACATCTTTATGACGTGCTGCTCACCGATGAATGCAGGCGCCGG
TATCCAGCACACCATAGCCTTCACCCTCGCCCATCGGAGGCAAAACGACT
GATACGCTGTCGTAATACCACGCACGAGTGAGGAATTATTGTCGTCGGCA
ACTGCTCACACTATCTTTATTCCGCACTTACACTTTCCCGCTCGCGAGCA
GGTTGGCGGGGGTTGCTCCATCGCTATCGCGGCATGCCCTCCGGGAATGA
CACGTGGCAATCTACTGGGGGACAAAATTACTGCCACGCTGTGACTGGAT
AATAATGACGAAAGGGTTTGCGGTCTAGCTACGTCAATTACTGGATGTCT
GTAGCTACTTCACTGGACGATCTAACGGATTGCCGTGCAATGTACTAATC
AATGTAATAATAGCAGGTGGGGGTGCTGAAGGGCGGAGTTTCGGGTTGGC
GATGTTTCCTGTGGGCTACATTCAGCCAAATGCTAGGGGGAAAAAGAGGG
CGCAGTAGTTTTGAAGAGGTCCAGGCCAAGCGCGGCAACCACGACGGGGC
CATATGAATCGCGGCGAACAATATACCAGAGATTCAATGTACAGCGCAGA
CTCTGTTACCGTTACTTCCTCGCGTCGATGCTTTTACCTCCGAGAGCTAT
AAGTAAGATATTCGGCTGCGTTAAAAAATAAATAAAGTTAGTGCATACGA
AGTATTTCACACAAGTGAAACCGATGTTACAACGGCAGGCAGTAGTAGTG
CACGACGGAAAAATAACGATGTGAGACTTGTGCCCGCCACGCACTACCTG
AGGGATCCAAGTCGGGGGAAGTGCAATTTGGGGGTGGTAAAGAAGCGATA
GGCGCTCGATCGGAGGTAGCAATTGGATCTGAGGTGTTGAACGTGTTCAG
ACGGGTCAATGAAATTCCAGCCTGAGTAGCAGCAATGATGAGGATCCTTC
CACGGATTATAATCCCCGCATGGAGGACAGAAATCCTACCCCCTGATTGA
CTTGTAGGGAAGCAAATGTTGAGCATGAGGAGGTCATTAGGATTGGGGCT
GTTGTGTGGAGGCGCGAGCGGGGACAGCAGACGGACCAAGCAAGCCTGGA
GCGATAGCTGAGAGCGAATTTACCAACAACGTACGTAAAGAGAGGATACA
GCGAATGTACAACTTCCTCTGACACATAAGTTAGCTCGGCTATGGTCCGC
AAATCATATATTTTGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1688:8568..11183- >mRNA_L-elsbetiae_contig1688.4616.1 ID=mRNA_L-elsbetiae_contig1688.4616.1|Name=mRNA_L-elsbetiae_contig1688.4616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig1688:8568..11183- (Laminarionema elsbetiae ELsaHSoW15) ATGTTCGGTCTCGCTTTCCAAAAGAACGCGTTGATAGAGGTCCTGTGGCA AGTGGAAATCAGGCCTAGCGGCAAGATGATGTTCGGTCTCGCTTTCCAAA AGAACGCGTTGATAGAGGTCCTGTGGCAAGTGGAAATCAGGCCTAGCGGC AAGATGGAAAAGCGGTGGCTCGCTGGCTCTGTGGACCTCATCGACATGAA CAGGACAGGTCAAGTCCTCGGTCAACCTCTGTGGAACATTCACTACAAAC GCCAGGGCACAATCCCGGCCTCGAAGGAAAAGCGGTGGCTCGCTGGCTCT GTGGACCTCATCGACATGAACAGGACAGGTCAAGTCCTCGGTCAACCTCT GTGGAACATTCACTACAAACGCCAGGGCACAATCCCGGCCTCGAAGCCAG GTTGCGTTCTTGAGCAAGGACAAGCTGAGGGACATGCTGAGATGAGACAA AGACAAAGGATCTTGGGAGGGCCAGCCCCTTTCCTGGAGGCCGAAGCAGC GTGACCAGGTTGCGTTCTTGAGCAAGGACAAGCTGAGGGACATGCTGAGA TGAGACAAAGACAAAGGATCTTGGGAGGGCCAGCCCCTTTCCTGGAGGCC GAAGCAGCGTGA back to top
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