prot_L-elsbetiae_contig16876.4614.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16876.4614.1
Unique Nameprot_L-elsbetiae_contig16876.4614.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length133
Homology
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BLAST of mRNA_L-elsbetiae_contig16876.4614.1 vs. uniprot
Match: A0A6H5KAS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 4.900e-31
Identity = 75/127 (59.06%), Postives = 85/127 (66.93%), Query Frame = 0 
Query:    1 RRDTLRGRFAYRQKYAVLRFPPPEAAALASWRRASSAGMAPXXXXXXTLTLLKGRSGAEKEKVVSLEGAEVTLGTAMAGNLYPFVVSFP----APQRAGPSGKDHRQQKQRGERHALPPRRNTEDFM 123
            RRDTLRGRFAYRQ+YAVLRF PPEAA+L+S RR S  G  P      TLTLLKGR  +E  KV+SLEGAEVTLGTAMAGNLYPFV+SFP    AP    P+ + HR +              TED+M
Sbjct:  592 RRDTLRGRFAYRQQYAVLRFEPPEAASLSSLRRESGFGGVPLRPPPPTLTLLKGRGKSETGKVMSLEGAEVTLGTAMAGNLYPFVISFPSTAPAPTTISPT-RSHRNRPXXXXXXXXXXXXXTEDYM 717
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BLAST of mRNA_L-elsbetiae_contig16876.4614.1 vs. uniprot
Match: D7FK06_ECTSI (CRAL/TRIO domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 2.220e-25
Identity = 68/107 (63.55%), Postives = 79/107 (73.83%), Query Frame = 0 
Query:    1 RRDTLRGRFAYRQKYAVLRFPPPEAAALASWRRASSAGMAPXXXXXXTLTLLKGRSGAEKEKVVSLEGAEVTLGTAMAGNLYPFVVSFPAPQRAGPS---GKDHRQQ 104
            RRDTLRGRFAYRQ+YAVLRF PPEA +L+S RR S +G  PXXXXXX          +E EKV+SLEGAEVTLGTAMAG+LYPFV+SFP+   A P+    + HR Q
Sbjct:  606 RRDTLRGRFAYRQQYAVLRFAPPEATSLSSLRRESGSGGVPXXXXXXXXXXXXXXXXSETEKVMSLEGAEVTLGTAMAGDLYPFVISFPSTAPAPPTISPTRSHRNQ 712
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16876.4614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAS6_9PHAE4.900e-3159.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK06_ECTSI2.220e-2563.55CRAL/TRIO domain containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16876contigL-elsbetiae_contig16876:92..2134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16876.4614.1mRNA_L-elsbetiae_contig16876.4614.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16876 90..2134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16876.4614.1 ID=prot_L-elsbetiae_contig16876.4614.1|Name=mRNA_L-elsbetiae_contig16876.4614.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp
RRDTLRGRFAYRQKYAVLRFPPPEAAALASWRRASSAGMAPMPPPPPTLT
LLKGRSGAEKEKVVSLEGAEVTLGTAMAGNLYPFVVSFPAPQRAGPSGKD
HRQQKQRGERHALPPRRNTEDFMQAPQEGVQPP
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