prot_L-elsbetiae_contig1686.4607.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1686.4607.1
Unique Nameprot_L-elsbetiae_contig1686.4607.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length452
Homology
BLAST of mRNA_L-elsbetiae_contig1686.4607.1 vs. uniprot
Match: D7G1P6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P6_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 4.620e-66
Identity = 211/449 (46.99%), Postives = 255/449 (56.79%), Query Frame = 0
Query:   22 MALPAQNTALEVLHALAFPDRVKNGLESLAAGGDDELSRRDELVASLSSDLDGPRQGQTLQGLCDML--GDHGSRAAVAQALDPVSWEVFGLVMGCLEK-----------STXXXXXXXXXXXXXXXXXXXXEIVAALAEKLALELAEIFNPKELHIMVLEHLHAYSKKRTVRTVLAVLRRSTQRMPPIRRAKFLEAALQPALTATKRAAXXXXXXVDAGNAPAD-----SRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETAMEFVGPLAEQAFAERAKLAHGPMEAAEAGRGGRYTSLGANASAGAKNSADSPVGCGEAVSASDLSLAAYLGFALSALELAAETSACMAASAXXXXXXXXXXXXXXSVAPSALPFEEKSAAVEALTKAEERLVGLVVGGPAAPFDLQFVLLHGCRLSHAERAKRRR 452
            M +  + TA+  +  LAF  + + G+    +        R+ LV+SL  DL GPR   TLQGL DML  G+H  RAAV + LD VSWE FGLV+GCLE+           S                     +  AAL+E LAL +AEIF+PKELH+M LEHLHAY+K RTVR VL +LRRST+RM   RR+KFLEA+L+PAL A KR          AG+APA+           XXXXXXXXXXXXXXXXXXXXXXX                     AETA +F+GPL EQA AERA LA   +  A  G G    +  A    G+ ++  S  G  E VSASDLSLAAY+GFALSALELA ETS C     XXXXXX                 E+  AA E+L +AEERL+G+VV    +P DL+F LLHGCR+S+A   KRRR
Sbjct:    1 MDIAEEMTAMAAVGLLAFSPQDEEGIGLQCS--------REALVSSLERDLQGPRVRVTLQGLYDMLVDGEHSHRAAVGEVLDTVSWEAFGLVVGCLERFATSPSPNSSGSVTGTFEKSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTVRVVLTILRRSTERMATARRSKFLEASLRPALKAAKRVGLVAA----AGDAPAEPGLRQKSSGSDXXXXXXXXXXXXXXXXXXXXXXXLLPTADGDMPSSAAYDAAASAAETAADFIGPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVAXXXGGSGHAVGS--GEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXXXXXXXXXTGS--------------EDNPAAGESLARAEERLIGIVVD---SPLDLRFALLHGCRVSYASGVKRRR 418          
BLAST of mRNA_L-elsbetiae_contig1686.4607.1 vs. uniprot
Match: A0A6H5JSB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB3_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 5.230e-61
Identity = 201/445 (45.17%), Postives = 248/445 (55.73%), Query Frame = 0
Query:   22 MALPAQNTALEVLHALAFPDRVKNGLESLAAGGDDELSRRDELVASLSSDLDGPRQGQTLQGLCDML--GDHGSRAAVAQALDPVSWEVFGLVMGCLEKSTXXXXXXXXXXXXXXXXXXXXEI-----------VAALAEKLALELAEIFNPKELHIMVLEHLHAYSKKRTVRTVLAVLRRSTQRMPPIRRAKFLEAALQPALTATKRAAXXXXXXVDAGNAPAD-SRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETAMEFVGPLAEQAFAERAKLAHGPMEAAEAGRGGRYTSLGANASAGAKNSADSPVGCGEAVSASDLSLAAYLGFALSALELAAETSACMAASAXXXXXXXXXXXXXXSVAPSALPFEEKSAAVEALTKAEERLVGLVVGGPAAPFDLQFVLLHGCRLSHAERAKRRR 452
            M +  + TA+ V+  LA P + + G+    +        R++LV+SL  DL GPR   TLQGL DML  G+      V + LD VSWE FGLV+GCLE+                      E             AAL+E+LAL +AEIF+PKELH+M LEHLHAY+K RT+R VL +LRRSTQ+M   RR KFLEA+L+PAL ATKR          AG+APA+              XXXXXXXXXXXXXXXXX                    AETA +F+GPL EQA AE+A LA   +  A  G G    ++ A ++ G+  +  S  G  E VSASDLSLAAY+GFALSALELA ETS C     XXXXXXX                E+   A E+L +A+ERLVG+VV    +P DL+FVLLHG R+S A   KRRR
Sbjct:    1 MDIGEEMTAVAVVRLLASPAQDEEGIGQQCS--------REQLVSSLERDLQGPRVRATLQGLHDMLVDGEQNHSTPVGEVLDTVSWEAFGLVVGCLERFATSASSNNSDSITGTFEKSSDEAETLTTSRDADDCAALSERLALAMAEIFSPKELHLMALEHLHAYTKARTLRVVLTILRRSTQQMVTARRWKFLEASLRPALEATKRVGLVAA----AGDAPAEPGLPQKSSGSDADEXXXXXXXXXXXXXXXXXLPTADEDMPSRAAYDAAASAAETAADFIGPLMEQASAEQALLAVSRVPTAGRGEGRPAAAVVATSAGGSGRAVGS--GEKEGVSASDLSLAAYIGFALSALELAGETSVCCTXXXXXXXXXXGS--------------EDNPPARESLARAQERLVGIVVD---SPLDLRFVLLHGYRVSFASGVKRRR 414          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1686.4607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1P6_ECTSI4.620e-6646.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSB3_9PHAE5.230e-6145.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..452
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.593

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1686contigL-elsbetiae_contig1686:4727..6633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1686.4607.1mRNA_L-elsbetiae_contig1686.4607.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1686 4726..6633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1686.4607.1 ID=prot_L-elsbetiae_contig1686.4607.1|Name=mRNA_L-elsbetiae_contig1686.4607.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
SACSAVLCCVWWLACTAPGYDMALPAQNTALEVLHALAFPDRVKNGLESL
AAGGDDELSRRDELVASLSSDLDGPRQGQTLQGLCDMLGDHGSRAAVAQA
LDPVSWEVFGLVMGCLEKSTTSSSSSRKSSNGSSNDDDDSEIVAALAEKL
ALELAEIFNPKELHIMVLEHLHAYSKKRTVRTVLAVLRRSTQRMPPIRRA
KFLEAALQPALTATKRAAAAEEEEVDAGNAPADSRHRQEYSSASDDDGND
GDGGSHEQGASPPPVAAEHEMASRAAFEAAAAAAETAMEFVGPLAEQAFA
ERAKLAHGPMEAAEAGRGGRYTSLGANASAGAKNSADSPVGCGEAVSASD
LSLAAYLGFALSALELAAETSACMAASAAFAASAASAETSAASVAPSALP
FEEKSAAVEALTKAEERLVGLVVGGPAAPFDLQFVLLHGCRLSHAERAKR
RR
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