prot_L-elsbetiae_contig1684.4593.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1684.4593.1
Unique Nameprot_L-elsbetiae_contig1684.4593.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1079
Homology
BLAST of mRNA_L-elsbetiae_contig1684.4593.1 vs. uniprot
Match: D8LF16_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF16_ECTSI)

HSP 1 Score: 630 bits (1626), Expect = 9.220e-198
Identity = 498/1197 (41.60%), Postives = 581/1197 (48.54%), Query Frame = 0
Query:    1 MEWALQEVFRLAEQCSDYKSNERVLHQLLRRGGAGGGGASRTPSMC-IAMPNPPTLRSPMLGRSPMFGTTSARSPADS-SSAGTRTPGTWTPTIVSPRSPAFPSYPSANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGAFDAMSGSPLPMEEDAVRKALGL-----PPTGSEDAEEGHISRRRRFGPSQVNNQSRREDGASGFGGADGGRKEEGGGQSERRCSQVNQAPGRAPLCLLLSNLGELFRWDVAAAADICADAFPGVRPWNVHHALQQEQHPYQEKAWNSSEPSTPVQQQGRGAPRRHSYS---------ADDDSGTRNDAAFHAYLWAMMQKRPSECSRDWKVIQRCLQLSLRLSTKMRSLPPDHSLQAFCKAATRKFSKSNPRPADQSTETSGNSGVXXXXXXXVRHPE-AFSTEIGSPLGSPYLRDDRWRQQAGSRGGGGNFTAMGMKDLRVSVGESGCAGXXXXXXXXXXXXXGLVWRRYSDVVHEVVSLWCQDVNAFDLDPLWLLPKLRAHKSWHVAFQVCAAVTSSWEEEQEHQEGSRRTPGNDYGTGPIENQRSSGPG-----------LASVLAVFDTLADACFTTFGDGDLDTLPAALAAVWAADGALRRVSIGARTA----------------------------------------------------SPMGGE------------------------WAEESRMVGFVRTLTQRCPGLPADTDTRVEQAVVGGD-DGXXXXXXXXXXASGDRGGSSTEGIRASTASEDAVGGGDGAAWPVGALSLLEL--------AGAVLDAVGPEATGEVLAACPRLLESMPPKFFLDMADRQAALREQQALEASLLRQATAAIWSARGRAAGGXXXXXXXSQGGNVRARARTNPLGPRLAWLACEELTSFFQHNATTTANPASAANTRGRLRGYSGNSSDMNINTSPAGSPLSLLLQPPIPRSHKQPGTKAGGSWLFGGTESHGSAFGLSFGDGIRGGDDASSLLVRKDEQ------LISKTVARMELNLVLPSGAHRGALLDPASPCGFCGLALSLSPSIDGGGVGDSDGVSGAGGASRGDEGDIGMAMALRSRAGSVLHANAADGDDIDVGDTSVTEVAVKVKACGHGYHARCLASASXXXXXXXXXXXXXXXXXRHGVELLYLPCPQCT 1078
            MEWAL EV RLAEQC DYKS ERVLHQLLR          RTPSM  ++  + PT+      RS MFGTT ARSPA+S S+ GTRTPG WTPTI+SP   AFPSY   +       XXXX                               G  DA   S  PMEEDAVRKALGL      P G+   +E H    RR   ++            GF G       E GG          QAPG APLCLLL+NL ELFRWDVAAAA++CADAFPGVRPWNVHHAL ++Q    +K W +SEP TPV   G G  R  + +          D D GTR DAAFHAYLWA+++K P EC  DWKVIQRCLQLSLRLSTK+RSLP DH L +FCKAATR F K   R  D +T  +G           VRHPE AFST+        +    RWR   GS GG G  T  G  DLR+ V +SG  G             G  WRRYSDVV E+VS WC+  +AF LDPLWLLPKLRAHK+W VAF++C A+  SWEE+ E         G+   TG I +  ++              L S L VFDTLADACF TF DGD +TL AAL   WAADGALRRVS+ AR                                                      SP+G +                        W EESRMV  VR L +RC G P   D        GGD DG             D G SST G  AS ASED  GG                        A AVLD VGPEATG+VLAACP LLE +PPKFF D+ADRQAAL +Q+ALEA+LL QATAAIW++RGR           +  G+    +  +PLGPRLAWLACEELTSFFQ NA    N ASA+     L G  G     +  +S AGSP  L       + H +   +   + + G   S    F     +G  G DD     +R+ E       L++     ++LNLVLP  AHRGA  DPASPCGFCGLALS      GGGV    G         G+EG+  + +                                   ACG G H+RCLA+A                       +L  PCPQC 
Sbjct:  861 MEWALDEVLRLAEQCEDYKSKERVLHQLLR--------GPRTPSMTTVSGRSSPTV---WHQRSAMFGTTPARSPANSISTTGTRTPGNWTPTIMSPSRAAFPSYQLPSEAMSAGGXXXXSGWKDGDGF---------------------GGTLDAALSSG-PMEEDAVRKALGLLVPPADPAGNVVEDENH----RRHANAEHGQ-------GVGFSG------HEAGGSGRLLSQTTKQAPGGAPLCLLLNNLRELFRWDVAAAAEMCADAFPGVRPWNVHHALHRDQ----DKPWTTSEPVTPV---GGGTARYQAQAPPAGAGVAGGDGDGGTRTDAAFHAYLWAVLRKHPGECRGDWKVIQRCLQLSLRLSTKLRSLPSDHPLHSFCKAATRNF-KRRRRADDPATRETG-----------VRHPEGAFSTDGRGQ----FHNSRRWRAGGGSGGGSGMRTPTG--DLRLGVEDSGETGD------------GSAWRRYSDVVEELVSQWCKHGDAFGLDPLWLLPKLRAHKNWPVAFRICGAIACSWEEQGER--------GHQMSTGVISHCHATAAADGLEEGHDYDSLVSTLPVFDTLADACFATFNDGDTETLAAALGTTWAADGALRRVSLRARPPPLRGDDGGGVSPGQQAVAASLSVEESQVLGQVSAYGNVAAAAAAAGPEFGHQSPIGMQGSSSARAGACAQEXXXXXXXXXXGWVEESRMVDVVRGLARRCSGQPVGADDAGGSNNDGGDADGR---------GDADLGCSSTGGGDASMASEDPEGGSXXXXXXXXXXXXXXXXXXXXXXXAEAVLDGVGPEATGDVLAACPHLLEGIPPKFFQDLADRQAALSQQRALEAALLHQATAAIWASRGR------RRATVTGAGDTGDSSDASPLGPRLAWLACEELTSFFQDNA----NSASASPNARLLGGEPG-----SAGSSCAGSPPGL-------QHHHRATMEVFAAGIGGDNLSR--VF-----NGSGGNDDGLFRSLRRKEPGSVSQGLVASMGVNLDLNLVLPGNAHRGAAFDPASPCGFCGLALS------GGGVACDGG---------GEEGEGELVLC----------------------------------ACGRGIHSRCLAAAGWEGGWDSGRWYEAG-------SMLVFPCPQCA 1868          
BLAST of mRNA_L-elsbetiae_contig1684.4593.1 vs. uniprot
Match: A0A6H5JMZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ7_9PHAE)

HSP 1 Score: 600 bits (1548), Expect = 2.180e-191
Identity = 483/1191 (40.55%), Postives = 565/1191 (47.44%), Query Frame = 0
Query:    1 MEWALQEVFRLAEQCSDYKSNERVLHQLLRRGGAGGGGASRTPSMC-IAMPNPPTLRSPMLGRSPMFGTTSARSPADS-SSAGTRTPGTWTPTIVSPRSPAFPSYPSANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGAFDAMSGSPLPMEEDAVRKALGL-----PPTGSEDAEEGHISRRRRFGPSQVNNQSRREDGASGFGGADGGRKEEGGGQSERRCSQVNQAPGRAPLCLLLSNLGELFRWDVAAAADICADAFPGVRPWNVHHALQQEQHPYQEKAWNSSEPSTPVQQQGRGAPRRHSYS---------ADDDSGTRNDAAFHAYLWAMMQKRPSECSRDWKVIQRCLQLSLRLSTKMRSLPPDHSLQAFCKAATRKFSKSNPRPADQSTETSGNSGVXXXXXXXVRHPEA-FSTEIGSPLGSPYLRDDRWRQQAGSRGGGGNFTAMGMKDLRVSVGESGCAGXXXXXXXXXXXXXGLVWRRYSDVVHEVVSLWCQDVNAFDLDPLWLLPKLRAHKSWHVAFQVCAAVTSSWEEEQEHQEGSRRTPG---NDYGTGP---IENQRSSGPGLASVLAVFDTLADACFTTFGDGDLDTLPAALAAVWAADGALRRVSIGAR----------------------------------------TASPMGGE----------------------------------WAEESRMVGFVRTLTQRCPGLPADTDTRVEQAVVGGD-DGXXXXXXXXXXASGDRGGSSTEGIRASTASEDAVGGGDGAAWPVGALSLLEL--------AGAVLDAVGPEATGEVLAACPRLLESMPPKFFLDMADRQAALREQQALEASLLRQATAAIWSARGRAAGGXXXXXXXSQGGNVRARARTNPLGPRLAWLACEELTSFFQHNATTTANPASAANTRGRLRGYSGNSSDMNINTSPAGSPLSLLLQPPIPRSHKQPGTKAGGSWLFGGTESHGSAFGLSFGDGIRGGDDASSLLVRKDEQ------LISKTVARMELNLVLPSGAHRGALLDPASPCGFCGLALSLSP-SIDGGGVGDSDGVSGAGGASRGDEGDIGMAMALRSRAGSVLHANAADGDDIDVGDTSVTEVAVKVKACGHGYHARCLASASXXXXXXXXXXXXXXXXXRHGVELLYLPCPQCT 1078
            MEWAL EV RLAEQC DYKS ERVLHQLLR          RTPS+  ++  + P +     G   M GTT ARSPA+S S+ GTRTPG WTPTI+SP    FPSY                                              G  DA   S  PMEEDAVRKALGL      P G+   +E H    RR      N +  +  G SG          E GG         +QAPG APLCLLL+NLGELFRWDVAAAA++CADAFPGVRPWNVHHAL ++Q    +K W +SEP TPV+    G+ R  +++          D D GTR DAAFHAYLWA+++K P EC  DWKVIQRCLQLSLRLSTK+RSLP DH L  FCK ATR   K   R  D +T  +G           VRHPE  FST+        +    RWR   GS GG G  T  G  DLR+ V +SG                G  WRRYSDVV EVVS WC+  +AF LDPLWLLPKLRAHK+W VAF++C A+T SWEE++E  EG +   G   + Y T     +E     G  L S L VFDTLADACF TF DGD +TL AAL A WAADGALRRVS+ AR                                        TA+  GG                                   W EESRMV  VR L +RC G P   D        GGD DG             + G SST G+ AS  SED  GG                        A AVLDAVGPEATG+VLAACP LLE +PPK         AAL +Q+ALEA+LL QATAAIW++RGR           +  GN    +  +PLGPRLAWLACEELTSFFQ NA    N ASA+     L G  G++              S    PP  + H +  T    + + G   S    F      G  G DD     +R+ E       L++     ++LNLVLP  AHRGA  +PASPCGFCGLALS    + DGGG G               EG + +                                     ACG G H+RCLA+A                       +L LPCPQC 
Sbjct:  330 MEWALDEVLRLAEQCEDYKSKERVLHQLLR--------GPRTPSVTTVSGRSSPRVWHQRAG---MLGTTPARSPANSISTTGTRTPGNWTPTIMSPSRAGFPSYQLPIEAMSAAGGAGGSGWKDGDGF---------------------GGTLDAALSSG-PMEEDAVRKALGLLVPPADPAGNVVEDENH----RRH----ANEEHGQGVGFSGH---------EAGGSGRLLGQTTSQAPGGAPLCLLLNNLGELFRWDVAAAAEMCADAFPGVRPWNVHHALHRDQ----DKPWTTSEPVTPVE---GGSARYQTHAPPAGAGVARGDGDGGTRTDAAFHAYLWAVLRKHPGECRGDWKVIQRCLQLSLRLSTKLRSLPSDHPLHNFCKVATRNL-KRRQRADDPATREAG-----------VRHPEGGFSTDGRGQ----FHNSRRWRAGGGSGGGSGMRTPTG--DLRLGVEDSG------------ETDDGSAWRRYSDVVEEVVSQWCKHGDAFGLDPLWLLPKLRAHKNWPVAFRICGAITCSWEEQEE--EGHQMNTGVISHCYATAAADGLEEGHDYGS-LGSTLPVFDTLADACFATFNDGDTETLAAALGATWAADGALRRVSLRARPPSLRGDDGGRLSPRQQAVASSLSGGKIQASGQTGAYSNVTAAAGGGPELGHQSLTGMQGSSSAGVGASAEXXXXXXXXXXGWVEESRMVDVVRGLARRCSGQPVGADDAGGSNNDGGDADGR---------GDANLGCSSTGGVDASMTSEDPEGGSXXXXXXXXXXXXXXXXXXXXXXXAEAVLDAVGPEATGDVLAACPHLLEGIPPK---------AALSQQRALEAALLHQATAAIWASRGR------RRTTATGAGNKGGSSDASPLGPRLAWLACEELTSFFQDNA----NSASASPNARLLGGEPGSAGP------------SCAESPPGLQHHHRATTDVFAAGVGGDNLSR--VF-----SGFGGNDDGLFRSLRRKEPGSVSQGLVATMGVNLDLNLVLPGNAHRGAAFNPASPCGFCGLALSGGAVACDGGGEG---------------EGKLVLC------------------------------------ACGRGIHSRCLAAAGWDSGRWYEAG-----------SMLVLPCPQCA 1321          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1684.4593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF16_ECTSI9.220e-19841.60PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JMZ7_9PHAE2.180e-19140.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1684contigL-elsbetiae_contig1684:7495..13080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1684.4593.1mRNA_L-elsbetiae_contig1684.4593.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1684 6275..14913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1684.4593.1 ID=prot_L-elsbetiae_contig1684.4593.1|Name=mRNA_L-elsbetiae_contig1684.4593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1079bp
MEWALQEVFRLAEQCSDYKSNERVLHQLLRRGGAGGGGASRTPSMCIAMP
NPPTLRSPMLGRSPMFGTTSARSPADSSSAGTRTPGTWTPTIVSPRSPAF
PSYPSANSNSNAASGSAYAYPHPLSSGGISAAAAGSVSASAARGGGIGSG
AFDAMSGSPLPMEEDAVRKALGLPPTGSEDAEEGHISRRRRFGPSQVNNQ
SRREDGASGFGGADGGRKEEGGGQSERRCSQVNQAPGRAPLCLLLSNLGE
LFRWDVAAAADICADAFPGVRPWNVHHALQQEQHPYQEKAWNSSEPSTPV
QQQGRGAPRRHSYSADDDSGTRNDAAFHAYLWAMMQKRPSECSRDWKVIQ
RCLQLSLRLSTKMRSLPPDHSLQAFCKAATRKFSKSNPRPADQSTETSGN
SGVGFGVGVGVRHPEAFSTEIGSPLGSPYLRDDRWRQQAGSRGGGGNFTA
MGMKDLRVSVGESGCAGAGAGAGFGDGDGDGLVWRRYSDVVHEVVSLWCQ
DVNAFDLDPLWLLPKLRAHKSWHVAFQVCAAVTSSWEEEQEHQEGSRRTP
GNDYGTGPIENQRSSGPGLASVLAVFDTLADACFTTFGDGDLDTLPAALA
AVWAADGALRRVSIGARTASPMGGEWAEESRMVGFVRTLTQRCPGLPADT
DTRVEQAVVGGDDGDGDGDGGGGGASGDRGGSSTEGIRASTASEDAVGGG
DGAAWPVGALSLLELAGAVLDAVGPEATGEVLAACPRLLESMPPKFFLDM
ADRQAALREQQALEASLLRQATAAIWSARGRAAGGGGGIGVGSQGGNVRA
RARTNPLGPRLAWLACEELTSFFQHNATTTANPASAANTRGRLRGYSGNS
SDMNINTSPAGSPLSLLLQPPIPRSHKQPGTKAGGSWLFGGTESHGSAFG
LSFGDGIRGGDDASSLLVRKDEQLISKTVARMELNLVLPSGAHRGALLDP
ASPCGFCGLALSLSPSIDGGGVGDSDGVSGAGGASRGDEGDIGMAMALRS
RAGSVLHANAADGDDIDVGDTSVTEVAVKVKACGHGYHARCLASASAGGG
HRWGGSGGGGGGGRHGVELLYLPCPQCT*
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