prot_L-elsbetiae_contig1683.4590.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1683.4590.1
Unique Nameprot_L-elsbetiae_contig1683.4590.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length428
Homology
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A8J5XYI5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYI5_DIALT)

HSP 1 Score: 113 bits (282), Expect = 1.880e-24
Identity = 118/385 (30.65%), Postives = 166/385 (43.12%), Query Frame = 0
Query:   41 AATFSLCGGYLVCASDSGRLAVWELAQHMDTDKQSFSTSDTT-PDMSWRADRSCINCLAFAG----DLLLCGGDESLFGCSWAAILSALEQGTPPQPSSWSSDVGDSEECVLRVRCPQ--GAAGTGARNPEINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSRVKNAAAGANIALLRPAHAQAGDGKEASPGARDSKPDNAACVTSLEMGDGGDTIVCGGRRTGGAVIAGGILEPTVGRGWVNQWNLADLKATEVASLP---AEVQCMHLTEQRQTLLVAGAESTLT--SLGRSQLERKARTPVTPRSVYALAANGTGPHEGLTCVAGVGPAVEV 413
            AA FS  G +LVCA+ SGR+ VW +A  +     + S S       S+ A  + +  L FA      LL+ GGD  + G +W A + A  +G  P P+              R+  P+  GA G+     E NG+  D+  + +  AAGDGNAY WDL +              LVR + G +GYLH V S P +  + TGS+DG   +WD RV  +AA      LRP     G G   S           A V + E     D +VCG    G AV+                W+L     T  A++P   A  Q         ++L  GAE ++   +L  S ++R   T  +   V +  A+G G   GL  V G GP V++
Sbjct:    5 AALFSPDGAHLVCAASSGRVHVWAVAPALGRAATADSASPHDGAHASFAAHGNAVYSLHFASVQGHQLLVTGGDTDIAGWAWPAAVEAAARGETPAPA-------------FRLEHPRAMGALGSVGALSECNGLAVDERERALYTAAGDGNAYAWDLGTC------------KLVRNFAGHEGYLHCVASRPHARQIVTGSEDGTARLWDVRVAESAA-----TLRP---PGGAGGWCS----------CAQVDATE-----DWLVCG---WGAAVLT--------------TWSLTAQTCT--AAMPTGAAPQQLRFAAHSPSSVLSVGAEPSVYEWTLAGSLVQRVTCTSTSLFGVDSTTAHGDG---GLIAVCGNGPRVQL 319          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A7S3V0P1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V0P1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.120e-15
Identity = 65/236 (27.54%), Postives = 108/236 (45.76%), Query Frame = 0
Query:   37 VTVTAATFSLCGGYLVCASDSGRLAVWELAQHM----------DTDKQSFSTSDTTP--------DMSWRADRSCINCLAFAGDLLLCGGDESLFGCSWAAILSALEQGTPPQPSSWSSDVGDSE--ECVLRVRCPQGAAGTGARNP--EINGVRFDKTT--KRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSRVK 248
            VTV  + F+  G YL C+ + G++ +W +  ++          +T  ++  T  T          D   +A ++ I  +A   + L+ G DE + G  W      + QG+    +    D G +   +C+  ++ PQ     G+ +P  E NG+  D+ T  K V  AAGDGNAY WDL++              ++ T+ G   YLH +     + ++ATGS+DG   +WD R K
Sbjct:    6 VTVFGSGFTPDGRYLACSDNFGQVGIWNMEYYLFQNSNWVHDNETKTEALETISTNSNLGAGVEKDFLLKAHKTPIYSIAVTENFLITGADEEIKG--WKTPW--MNQGSTSSNAKSDVDGGGNAVGKCLFELKTPQLEGLRGSLSPWAETNGIAVDEVTNTKYVFSAAGDGNAYCWDLETQ------------KVLTTFSGHSDYLHCISLICQNGLIATGSEDGTCKLWDRRAK 225          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: UPI000D1CC3CC (THO complex subunit 6-like n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CC3CC)

HSP 1 Score: 70.1 bits (170), Expect = 1.720e-9
Identity = 51/146 (34.93%), Postives = 68/146 (46.58%), Query Frame = 0
Query:  103 LLLCGGDESLFGCSWAAILSALEQGTPPQPSSWSSDVGDSEECVLRVRCPQGAAGTGARNP--EINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSR 246
            L  CG D  +    W  +L  L        S  SSD+   E  VL ++ PQ     G+  P  E NG+  D  T  + CAAGDG AY WDL++             S+V  ++G  GYLH + S P    + TGS+DG   +WD R
Sbjct:  104 LASCGDDGRIAIWRWNDVLERLG-------SDSSSDM--QERPVLEMKIPQQRGQHGSLLPVAEANGLAADAGT--LFCAAGDGCAYGWDLET----------GQGSMV--FQGHAGYLHCIASRPSQKQLITGSEDGTCRIWDCR 226          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A3P3YK09_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YK09_PLABS)

HSP 1 Score: 68.6 bits (166), Expect = 4.830e-9
Identity = 59/214 (27.57%), Postives = 85/214 (39.72%), Query Frame = 0
Query:   38 TVTAATFSLCGGYLVCASDSGRLAVWE---LAQHMDTDKQSFSTSDTTPDMSWRADRSCINCLAFAGDLLLCGGDESLFGCSWAAILSALEQGTPPQPSSWSSDVGDSEECVLRVRCPQGAAGTGARNP--EINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSR 246
            TV    FS  G  L        L VWE   +A  +D  ++     DTT  M   A    I  + FA + L+ GGD S+                      W  D+   EE +L +  PQG    G      E NG+ +   T+ +  A+G   A++WDL +              +V  + G   YLH +      S + TGS+DG+V +WD R
Sbjct:   30 TVFTCAFSNDGSLLAAGDSRSALNVWETSSVAGEVDKCQRFAMPLDTTCRMRTNARAGPIYSVVFAENRLVSGGDLSI--------------------KVW--DIDCVEEPLLELVNPQGTTAAGGLTAVSETNGLAYCSETRALFSASGQAAAFQWDLST------------GQVVMRFAGHDDYLHCISMGVTPSTILTGSEDGFVRLWDIR 209          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A7S2N521_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N521_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 4.220e-8
Identity = 40/110 (36.36%), Postives = 51/110 (46.36%), Query Frame = 0
Query:   88 RADRSCINCLAFA----GDLLLCGGDESLFGCSWAAILSALEQGTPPQPSSWSSDVGDSEECVLRVRCPQGAAGTGARNP--EINGVRFDKTTKRVLCAAGDGNAYEWDL 191
            RA R  +  LAFA    G +LL G DE + G  W A+L A   G  P P             +LR+   + + G GA     E + +  D    R+  AAGDGNAY WDL
Sbjct:    1 RAHRCAVYALAFAETKSGLVLLSGADEEICGWRWDAVLGAANGGAVPAP-------------MLRLENARASLGRGALGQLSETSALSVDAAAGRLYSAAGDGNAYAWDL 97          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A7S2WDE8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WDE8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.460e-7
Identity = 36/107 (33.64%), Postives = 53/107 (49.53%), Query Frame = 0
Query:  144 ECVLRVRCPQGAAGTGARNP--EINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSRVK 248
            + +  +R PQ     G+ +P  E NG+      + +  AAGDGNAY WD+ +              L   + G K YLH++VS   + ++ATGS+DG    WD R K
Sbjct:    5 DAIGELRIPQLEGSRGSLSPLAETNGLTSLNKGQTLAAAAGDGNAYCWDVATQ------------VLTHCFSGHKDYLHSIVSLERNGLIATGSEDGTCKFWDVREK 99          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A7S2RUV4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RUV4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.480e-7
Identity = 36/107 (33.64%), Postives = 53/107 (49.53%), Query Frame = 0
Query:  144 ECVLRVRCPQGAAGTGARNP--EINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSRVK 248
            + +  +R PQ     G+ +P  E NG+      + +  AAGDGNAY WD+ +              L   + G K YLH++VS   + ++ATGS+DG    WD R K
Sbjct:   94 KAIGELRIPQLEGSRGSLSPLAETNGLTSLNKGQTLAAAAGDGNAYCWDVATQ------------VLTHCFSGHKDYLHSIVSLERNGLIATGSEDGTCKFWDVREK 188          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A8J4ANR3_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4ANR3_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 1.720e-6
Identity = 77/258 (29.84%), Postives = 109/258 (42.25%), Query Frame = 0
Query:  177 VLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSRVK----NAAAGANIALLRPAH----AQAGDGKEASPGARDSKPDNAACVTSLEMGDGGDTIVCGGRRTGGAVIAGGILEPTVGRGWVNQWNLADLKATEVASLPAEVQCMHLTEQRQTLLVAGAESTLTSLGRSQLERKARTPVTPRSVYALAANGTGPHEGLTCVAGVGPAVEVYTMPGVSSKTLCF 426
            V     DG  Y  DL S GA ++ S   + + V   +     LH       SS +ATGS+DG V +WDSR+      A  G  + +L  A     A  G G E     R+        VT L     G  ++CG    GG+  AGG      G G ++ WNL+   A      P       +  Q   LLV G+E+ L+    + LE     P+  RSV+AL  +   P  G   V GVG ++E+ +  G  +  + F
Sbjct:  229 VFAGCSDGGVYCLDLSS-GAVSSPSGAGHVAAVLAMD-----LHEP-----SSCLATGSEDGTVRLWDSRLGLRGGTAGGGRCVRVLDSAAGREVAGGGGGTEVLQCLRNPP------VTCLRFEPSGSWLLCG---QGGSGAAGG------GIGSLSLWNLS--MAQRARQAPTNFVPQAMAVQPAELLVVGSEAALSRYSLA-LEGPTLQPLATRSVFALDVH---PLTGAVAVGGVGASLELLSKYGKRTGGVAF 454          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A671WFV7_SPAAU (THO complex 6 n=9 Tax=Sparidae TaxID=8169 RepID=A0A671WFV7_SPAAU)

HSP 1 Score: 59.3 bits (142), Expect = 5.430e-6
Identity = 79/394 (20.05%), Postives = 143/394 (36.29%), Query Frame = 0
Query:   37 VTVTAATFSLCGGYLVCASDSGRLAVWELAQHMDTDKQSFSTSDTTPDMSWRADRSCINCLAFAGDLLLCGGDESLFGCSWAAILSALEQGTPPQPSSWSSDVGDSEECVLRVRCPQGAAGTGARNPEINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSRVKNAAAGANI----ALLRPAHAQAGDGKEASPGARDSKPDNAACVTSLEMGDGGDTIVCGGRRTGGAVIAGGILEPTVGRGWVNQWNLADLKATEVASLPAEVQCMHLTEQRQTLLVAGAESTLTSLGRSQLERKARTPVTPRSVYALAANGTGPHEGLTCVAGVGPAVEVYTMPGVSSKTLCF 426
            ++V + +FS CG YL   ++ G +A++ L+  +  D    +     P +++ A    +  L  +   LL  G+  +   SW  ++  +      Q        G   + ++               PEIN +  +     ++   GD N +  DL+            +       +G   Y+H V      + + +GS+DG V +WDSR+  +     +    +  RP +     GK  S            CVT+       D ++CGG  +                  ++ W+L  L  T +  L     C       Q +++A  +    S      E KA+ P TP+S+  L  N       +    G    +EV+T     + +L F
Sbjct:   49 MSVFSQSFSPCGRYLAAGNNYGEIALFSLSAALSPDA---TVQSQKPVLTFTAHEGPVFTLISSDCHLLSAGNGEISAWSWTELIKKVTVSLNTQQP------GKQHDLII---------------PEINAMIINPRDNSLVVGGGDNNVHILDLE------------HGVFKSVLQGHSDYIHCVSVREREADILSGSEDGAVRIWDSRMDQSVHCIEVYKYESCARPQY-----GKWIS------------CVTTDS-----DWMLCGGGPS------------------LSLWHLRSLSPTSIFPLTG---CQRQAAFHQDMILAVGDGPFVSHCLLGGEVKAQIPCTPQSLNTLQLNTNSTEHRVLTAGGSSDHIEVFTNLSYRAFSLSF 363          
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Match: A0A2R5GHA7_9STRA (THO complex subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHA7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.410e-5
Identity = 57/167 (34.13%), Postives = 74/167 (44.31%), Query Frame = 0
Query:   86 SWRADRSCINCLAFAGD--LLLCGGDESL--FGCSWAAILSALEQGTPPQPSSWSSDVGDSEECVLRVRCPQGAAGTGARNP--EINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAGSDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSR 246
            S+RA  S I  LA   D  L+  G DE +  +   WA   S+        PS            V   R PQ     GA +P  E NG+        ++ AAGDGNAY +D+        G+ K    LV    G +  LHAVV+   S +VATGS+DG   +WD R
Sbjct:   99 SFRAHESAIYTLAQHRDANLVFTGADEEIRVWRAPWAEEYSS--------PSH-----------VAEFRVPQIKGARGALSPVAETNGLAMLDKGATLVAAAGDGNAYLFDV--------GTQK----LVHKLPG-QDMLHAVVAMERSGLVATGSEDGLCRLWDPR 233          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1683.4590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A8J5XYI5_DIALT1.880e-2430.65Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3V0P1_9STRA6.120e-1527.54Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
UPI000D1CC3CC1.720e-934.93THO complex subunit 6-like n=2 Tax=Selaginella moe... [more]
A0A3P3YK09_PLABS4.830e-927.57Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A7S2N521_9EUKA4.220e-836.36Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S2WDE8_9STRA1.460e-733.64Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2RUV4_9STRA4.480e-733.64Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8J4ANR3_9CHLO1.720e-629.84Uncharacterized protein n=2 Tax=Volvox africanus T... [more]
A0A671WFV7_SPAAU5.430e-620.05THO complex 6 n=9 Tax=Sparidae TaxID=8169 RepID=A0... [more]
A0A2R5GHA7_9STRA2.410e-534.13THO complex subunit 6 n=1 Tax=Hondaea fermentalgia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 29..64
e-value: 3.4
score: 13.6
coord: 142..190
e-value: 2.2
score: 14.8
coord: 205..244
e-value: 2.7E-4
score: 30.3
coord: 80..116
e-value: 72.0
score: 5.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 208..244
e-value: 0.034
score: 15.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 212..244
score: 9.773
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 25..113
e-value: 1.9E-6
score: 28.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 134..417
e-value: 3.4E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR44411FAMILY NOT NAMEDcoord: 19..426
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 231..245
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 158..253
score: 10.812
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 39..398

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1683contigL-elsbetiae_contig1683:14290..18128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1683.4590.1mRNA_L-elsbetiae_contig1683.4590.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1683 13569..18497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1683.4590.1 ID=prot_L-elsbetiae_contig1683.4590.1|Name=mRNA_L-elsbetiae_contig1683.4590.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=428bp
MFSYTASFDGQGSRCPADFSRDAYARGLQQERLRAAVTVTAATFSLCGGY
LVCASDSGRLAVWELAQHMDTDKQSFSTSDTTPDMSWRADRSCINCLAFA
GDLLLCGGDESLFGCSWAAILSALEQGTPPQPSSWSSDVGDSEECVLRVR
CPQGAAGTGARNPEINGVRFDKTTKRVLCAAGDGNAYEWDLQSLGAAAAG
SDKDNTSLVRTYEGGKGYLHAVVSTPGSSVVATGSDDGYVGVWDSRVKNA
AAGANIALLRPAHAQAGDGKEASPGARDSKPDNAACVTSLEMGDGGDTIV
CGGRRTGGAVIAGGILEPTVGRGWVNQWNLADLKATEVASLPAEVQCMHL
TEQRQTLLVAGAESTLTSLGRSQLERKARTPVTPRSVYALAANGTGPHEG
LTCVAGVGPAVEVYTMPGVSSKTLCFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf