mRNA_L-elsbetiae_contig1682.4583.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI) HSP 1 Score: 682 bits (1761), Expect = 8.480e-241 Identity = 394/486 (81.07%), Postives = 424/486 (87.24%), Query Frame = 1 Query: 1 QDTLVAIRVTLPDKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXDGARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAKKDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYNAKKVAEAPEEAGSDEESE 1458 +DTLVAIRVTLP+KDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATITVNM+AEDLQ KYD NLNSEM+GPLHNLIAKIFKVLS KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+SGND AMLQLGDLDDHDPYKAALDDDQG+DEESEX XXXXXXXXXXXXXXXD A K + XXXXXXXXXXXXXXXXX AKKDK+APKGAM+AFMQFSQA RA++K +NP++K+TEISKVLGEKW +DE K +Q KA+ DKARY++E AY++KK A P + +S+ Sbjct: 157 EDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXX---AKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAATEPPQQSDSNDSD 639
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE) HSP 1 Score: 549 bits (1415), Expect = 6.950e-191 Identity = 322/458 (70.31%), Postives = 338/458 (73.80%), Query Frame = 1 Query: 1 QDTLVAIRVTLPDKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAK----IFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXX-------------------------DGARKXXXXXXXXXXXXXXXXK------------GXXXXXXXXXXXXXXXXXXKRAKKDKNAPKGAMTAFMQFSQAKRAE 1251 +DTLVAIRVTLP+KDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA ITVNM+AEDLQ KYD NLNSEM+GPLHNL+AK IFKVLS KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNK GAGVTRNFDLCVAPKSVAGET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND AMLQLGDLDDHDPYKAALDDD+G+DEESE DADYAPDARGGS XXXXXXXXXXXXX DGA K + KR KKDK+APKGAM+AFMQFSQA RA+ Sbjct: 41 EDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQ 469
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA) HSP 1 Score: 400 bits (1028), Expect = 2.500e-130 Identity = 287/506 (56.72%), Postives = 342/506 (67.59%), Query Frame = 1 Query: 1 QDTLVAIRVTLPDKDEDTD--------------EPSP---AESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXDGARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAK-------------------KDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYNA 1407 +D LV +R+ LPD+ ED D + P AE+ AV++RANI DVKG VL E + S GTF PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NM+ +LQ KY G L M G L NLIAKIFK LS + V+VTG + S GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q V R+FDLCV +S++GE +K Y FSGIDRSEY SLY + TK LRIKNIK SG+ A +D D + E + P+A G XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX + + KD NAPKGA +AFM FS R ++ + P +KITE+SKVLGE+WRGM + K F+ KA ADKARY EM Y + Sbjct: 101 KDCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVREEG---------EIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARYGTEMQEYKS 597
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7R9VM85_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VM85_9STRA) HSP 1 Score: 328 bits (842), Expect = 1.810e-106 Identity = 166/293 (56.66%), Postives = 220/293 (75.09%), Query Frame = 1 Query: 4 DTLVAIRVTLP-DKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAP-KSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSG 867 D LVA+R +P D D D E P+PAE Q +++ ANI G V+VE E +GTF PRGRY++E+Y F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A +TVN+ E L+ +Y+G+L M G L NL+AK FK+++KK V++ GKF++ N VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+ TRNFDLCV+ S A K Y+FSGIDRS+YT LY+FLS KK++IKN++ G Sbjct: 21 DQLVAVRFYIPPDPDADPSEQDAPTPAELFQQRIMKNANIKRTTGDVIVEIPEEKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLLNSGADAGTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGGG 311
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA) HSP 1 Score: 333 bits (855), Expect = 5.300e-105 Identity = 168/296 (56.76%), Postives = 220/296 (74.32%), Query Frame = 1 Query: 4 DTLVAIRVTLPDKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 879 D LVAIR +P E D D P+ AE +++ A I + G V+VEF+E++GTF PRGRY +E+Y F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + +TVN+ ++L+ +Y G L M G L NLIAK FK+++KK V++ GKF + VKCAL ANEGHLYPL KSF+FIHKP +I FDE+DSVEFQRY G QG+ TRNFDLCV S AG+ K Y+FSGIDRS+YTSLY+FLS KK++IKNI++S D A Sbjct: 187 DQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKIDTA 480
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA) HSP 1 Score: 342 bits (876), Expect = 1.460e-104 Identity = 224/492 (45.53%), Postives = 306/492 (62.20%), Query Frame = 1 Query: 4 DTLVAIRVTLP-DKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQ---------------LGDLDD--HDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXDGARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAKK---DKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYNA 1407 D LVAIR +P D D D E +PAE Q +++ ANI G V+VE E++GTF PRGRY++E+Y F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A +TVN+ E L+ +Y+G+L M G L NL+AK FK+++KK V++ GKF++ N VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+ TRNFDLCV+ + + K Y+FSGIDRS+YT LY+FLS KK++IKN++ + D A G++++ D D++ + E D D S D K XXXXXXX XXXXXXXXXXXXXX KK D APK +A+ F A R +IK +NPD E+S + G+ W+ + + K +++ AE+D AR+++EM Y+A Sbjct: 189 DQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFKREMADYSA 678
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA) HSP 1 Score: 335 bits (858), Expect = 4.650e-103 Identity = 249/484 (51.45%), Postives = 325/484 (67.15%), Query Frame = 1 Query: 4 DTLVAIRVTLPDKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQ-SGNDKAMLQLGDLD------DHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXD-----GARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAKKDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAY 1401 D LV+IR +P E D S AE LQ +++ ANI G V+VEF+ +G+F PRGRYS+E+Y F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD I VN+ + L+ +Y +L M G L NL+AK FKV++KK V++ GKFS+ N VKCAL ANEG LYPL K F+FIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV+ K+ A + + YVFSG+DRS+YT LY+FLSTK +RIKN+++ +G + + D D DH+ + + +D+ D+ + X XXXXXXXXXXXXXX D G + XXXXXXXXXXXXXXXX XXXXXXXXXX XXXX AKKD N PK A +AFM FS A RA +K ENPD K E++K+L +++ + +D A +K E +K RY++EM Y Sbjct: 191 DQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEES-EDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXXAKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRYEREMENY 671
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA) HSP 1 Score: 336 bits (861), Expect = 3.230e-102 Identity = 167/297 (56.23%), Postives = 227/297 (76.43%), Query Frame = 1 Query: 4 DTLVAIRVTLP---DKD-EDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET-AKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 879 D LV +R+ +P D D +D D +PAE LQ +++ ANI + G V+VEF+ES+GTF PRGRY++E+Y F+RM G++YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ ++VN+ E LQ++Y G+L M G L NL+AK FKV++KK V++ GKF++ N VKCAL ANEGHLYPL K F+FIHKP ++ FDE++SVEFQRY G QG+ TRNFDLCV + +G+T +K YVFSGIDRS+YT LY+FLS KK++I N + G + A Sbjct: 197 DQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVGMEDA 491
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC) HSP 1 Score: 332 bits (851), Expect = 1.080e-101 Identity = 240/489 (49.08%), Postives = 323/489 (66.05%), Query Frame = 1 Query: 4 DTLVAIRVTLP-DKDEDT---DEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADY---APDARGGSXXXXXXXXXXXXXXXDG-----ARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAK--------KDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYN 1404 D LVA+R +P D D D D P+ AE+LQ +++ A++ G ++ EF+E +GTF PRGRYS+E+Y F+R+ G++YDYKI+Y+DIS+LFLL + D+ VAFV++LDKPIRQGQQ+Y LV++ TK+ + + +N+ L+ +Y G + M G NL+AK FKV+++K V++ GKF+++N VKCAL ANEGHLYPL K FIFIHKP +I FDEI+SVEFQRY G QG+ TRNFDLCV+ S G++A K Y FSGID+S Y +LYSFLS KK++IKN++ G + P D+ DDEES+ D+D+ AP + XXXXXXX D +KXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX + +D NAPK +A++ F+ AKR+EIK NPD +ISK+LG+ ++ + + K + A DKARY++EM Y+ Sbjct: 192 DQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKK----------PGAPRYDERMSDDEESD-DSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREMEDYD 667
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S2US25_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US25_9STRA) HSP 1 Score: 313 bits (803), Expect = 2.050e-101 Identity = 151/259 (58.30%), Postives = 202/259 (77.99%), Query Frame = 1 Query: 94 IERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQS 864 +++ANI + G V+VEF+E +GTF PRGRY +E+Y F+RM G++YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LV++TTK+ A +T+N+ L+ +Y+G+L M G L NL+AK FKV++KK V++ GKF++ N VKCAL ANEGHLYPL K FIFIHKP +I FDE+DSVEFQRY G QG+ TRNFDLCV + G++ K Y+FSGIDRS+Y LYSFLS KK+RIKN++ + Sbjct: 1 MKKANIKNTTGDVIVEFDEEKGTFLTPRGRYMIELYDTFLRMRGNKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVMQTTKEHAEVTINLDEATLKKEYNGDLQPVMNGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFIFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVRLLNSVGDSGNTKEYIFSGIDRSDYAGLYSFLSGKKIRIKNLQSA 257 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1682.4583.1 >prot_L-elsbetiae_contig1682.4583.1 ID=prot_L-elsbetiae_contig1682.4583.1|Name=mRNA_L-elsbetiae_contig1682.4583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=487bp QDTLVAIRVTLPDKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNEback to top mRNA from alignment at L-elsbetiae_contig1682:17842..24062- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1682.4583.1 ID=mRNA_L-elsbetiae_contig1682.4583.1|Name=mRNA_L-elsbetiae_contig1682.4583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6221bp|location=Sequence derived from alignment at L-elsbetiae_contig1682:17842..24062- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1682:17842..24062- >mRNA_L-elsbetiae_contig1682.4583.1 ID=mRNA_L-elsbetiae_contig1682.4583.1|Name=mRNA_L-elsbetiae_contig1682.4583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2922bp|location=Sequence derived from alignment at L-elsbetiae_contig1682:17842..24062- (Laminarionema elsbetiae ELsaHSoW15)back to top |