prot_L-elsbetiae_contig1682.4582.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1682.4582.1
Unique Nameprot_L-elsbetiae_contig1682.4582.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length99
Homology
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: D7FLF7_ECTSI (Probable Spc3 homolog, subunit of Signal Peptidase Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF7_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 4.060e-60
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQAS 99
            MHTAWVR+NAV FFGLTVLL LSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYET TNPVNQAS
Sbjct:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQAS 99          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A835YJ42_9STRA (Signal peptidase 22kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ42_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.520e-38
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            M+T WVRLNAV FFGLTVLLGL+++TA STYLH+G P V+ L ++K ++FR     DR ++N D++ADLAPAFNWN+KQ+F FVVAE+ T+TNP+NQ
Sbjct:    1 MNTVWVRLNAVVFFGLTVLLGLALMTATSTYLHEGHPTVKTLRLNKIKSFRSQSKVDRAIINFDLEADLAPAFNWNIKQIFVFVVAEFATKTNPLNQ 97          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A6V1NT77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NT77_HETAK)

HSP 1 Score: 129 bits (325), Expect = 3.690e-36
Identity = 60/97 (61.86%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            M+T WVR+NAV FFGLTVLL L+++ A STYLH+G P+++ LGV+  R+ +   G DR L++ D+DADL PAFNWN+KQLF FVVAEY TE NP+NQ
Sbjct:    4 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKNPLNQ 100          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A7S2XZ74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ74_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.710e-33
Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            M+T WVRLNAV FFG TVLL L+ + + ST+LH+G P ++ LG++  R+ R  +G DR+L++ D+DADL+ AFNWN+KQLF FVVAEY T+TNP NQ
Sbjct:    1 MNTIWVRLNAVVFFGFTVLLCLACMCSFSTFLHKGEPHIKYLGLNTIRSMRAQKGGDRVLISFDIDADLSGAFNWNIKQLFVFVVAEYATKTNPFNQ 97          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A7S4J3F9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3F9_9STRA)

HSP 1 Score: 118 bits (296), Expect = 8.610e-32
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGF--PDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            MHT WVRLNAV FFGLTVLLGLS+L ALS   H     PDV++L +   R+ +   G DR LL+ D+D DL PAF+WN+KQLF +VVA YE++TNP NQ
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLGLSILAALSKSGHSNRYRPDVKRLELKTLRSLKSHGGVDRALLSFDIDVDLRPAFHWNIKQLFVYVVASYESDTNPNNQ 99          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A7S2SN40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN40_9STRA)

HSP 1 Score: 116 bits (291), Expect = 6.980e-31
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            MHT WVRLNAV FFGLTV++ L+VLT  ST  H+G+P V  L ++   T R     D  +L+ D+ ADL+PAFNWN+KQLF FVVAEY T+TNP+NQ
Sbjct:    1 MHTVWVRLNAVVFFGLTVIVVLAVLTWFSTVTHRGYPTVDTLQLNSIGTLRNHGERDIAILSFDLHADLSPAFNWNIKQLFVFVVAEYRTKTNPLNQ 97          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A7S2XM83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM83_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.190e-30
Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLH--QGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            MHT WVRLNAV FFGLTVLLGLSVL A+S   H  +  P V KL +++ R+ +   G DR LL+ D+ AD+ PAF+WN+KQLF +VVA YET+TNP NQ
Sbjct:    5 MHTVWVRLNAVVFFGLTVLLGLSVLAAISAIGHSTRHKPVVSKLSLNQLRSLKSHGGVDRALLSFDLHADMRPAFHWNIKQLFVYVVASYETDTNPNNQ 103          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A7R9UGA1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGA1_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.040e-30
Identity = 60/98 (61.22%), Postives = 68/98 (69.39%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYL-HQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            MHT WVRLNAV FF  TVLL LS L A+ T L H G P V  L + + R+ RK    DR +L  D+DADL  AFNWNVKQLF FVVAEY T+TNP+NQ
Sbjct:   18 MHTIWVRLNAVVFFSFTVLLALSTLAAVQTMLFHDGQPVVHTLRLRELRSLRKHANIDRAMLTFDIDADLRGAFNWNVKQLFVFVVAEYATQTNPLNQ 115          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: A0A7S2IIZ8_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2IIZ8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.170e-28
Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGF--PDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            MHT WVRLNAV FFGLTVLLGLS+  A+S + H     P V KL ++K R+ +   G DR LL+ D+  DL PAF+WN+KQLF +V+A YET+ NP N+
Sbjct:   24 MHTVWVRLNAVVFFGLTVLLGLSIAAAISKWGHASRHKPVVEKLKLNKLRSLKSHGGVDRALLSFDLHVDLTPAFHWNIKQLFVYVIATYETDKNPKNE 122          
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Match: B8CCG8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCG8_THAPS)

HSP 1 Score: 109 bits (272), Expect = 3.660e-28
Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    1 MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLH--QGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQ 97
            MHT WVRLNAV FFGLTVLL LS+L ALS   H  +  P + KL ++  R+ +   G DR LL+ D+ AD+ PAF+WN+KQ+F +VVA Y+T+TNP NQ
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLCLSILAALSKIGHTRRYQPKIHKLALNNLRSVKNHGGVDRALLSFDLHADMNPAFHWNIKQIFVYVVATYKTDTNPKNQ 99          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1682.4582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF7_ECTSI4.060e-6095.96Probable Spc3 homolog, subunit of Signal Peptidase... [more]
A0A835YJ42_9STRA3.520e-3862.89Signal peptidase 22kDa subunit n=1 Tax=Tribonema m... [more]
A0A6V1NT77_HETAK3.690e-3661.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZ74_9STRA1.710e-3358.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4J3F9_9STRA8.610e-3259.60Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2SN40_9STRA6.980e-3158.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XM83_9STRA1.190e-3059.60Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7R9UGA1_9STRA2.040e-3061.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2IIZ8_9STRA1.170e-2855.56Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]
B8CCG8_THAPS3.660e-2855.56Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..99
e-value: 4.5E-18
score: 63.2
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 5..98
e-value: 4.0E-24
score: 85.0
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 1..98
NoneNo IPR availablePANTHERPTHR12804:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 3coord: 1..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1682contigL-elsbetiae_contig1682:10826..11245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1682.4582.1mRNA_L-elsbetiae_contig1682.4582.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1682 10826..11245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1682.4582.1 ID=prot_L-elsbetiae_contig1682.4582.1|Name=mRNA_L-elsbetiae_contig1682.4582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
MHTAWVRLNAVTFFGLTVLLGLSVLTALSTYLHQGFPDVRKLGVSKFRTF
RKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETETNPVNQAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007653SPC3