prot_L-elsbetiae_contig16811.4578.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16811.4578.1
Unique Nameprot_L-elsbetiae_contig16811.4578.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length75
Homology
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BLAST of mRNA_L-elsbetiae_contig16811.4578.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.630e-20
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:    1 MVTSQARSMSHTFWGAEQAKDHEEGETTLASTEMQESMCRLETENASLRALVDSMQMDLQMANARI 66
            +VTS ARSMS TFWGAEQ KDH+   +  ASTEMQE++ R+E ENASLRALVDSMQMDLQMANAR+
Sbjct: 1035 VVTSHARSMSSTFWGAEQEKDHQRRGSLQASTEMQENLNRVEAENASLRALVDSMQMDLQMANARL 1100
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BLAST of mRNA_L-elsbetiae_contig16811.4578.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.340e-19
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:    6 ARSMSHTFWGAEQAKDHEEGETTLASTEMQESMCRLETENASLRALVDSMQMDLQMANARI 66
            ARSMS TFWGAEQ KDH+   ++ ASTEMQES+ R+E ENASLRALVDSMQMDLQMANAR+
Sbjct:  905 ARSMSSTFWGAEQEKDHQRRGSSQASTEMQESLSRMEAENASLRALVDSMQMDLQMANARL 965
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16811.4578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0T6_9PHAE3.630e-2074.24Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FR41_ECTSI2.340e-1977.05Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16811contigL-elsbetiae_contig16811:1991..2574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16811.4578.1mRNA_L-elsbetiae_contig16811.4578.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16811 1787..3453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16811.4578.1 ID=prot_L-elsbetiae_contig16811.4578.1|Name=mRNA_L-elsbetiae_contig16811.4578.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=75bp
MVTSQARSMSHTFWGAEQAKDHEEGETTLASTEMQESMCRLETENASLRA
LVDSMQMDLQMANARILRRAAKAF*
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