mRNA_L-elsbetiae_contig16745.4553.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: D7FYR5_ECTSI (RNase_PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR5_ECTSI) HSP 1 Score: 165 bits (417), Expect = 2.280e-49 Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 1 Query: 1 GIDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSR 261 G+DLDALGIVDGKFCWVVFVDIL ADGNLLDASSFAAYTALNTARIPKVTPLVGEGG++DDFEISSEIDDAV+IKGA NVPVCLTMSR Sbjct: 125 GLDLDALGIVDGKFCWVVFVDILVLQADGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSEIDDAVAIKGATNVPVCLTMSR 214
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A6H5JQU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU5_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.830e-48 Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 1 Query: 1 GIDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 264 G+DLDALGIVDGKFCWVVFVDIL ADGNLLDASSFAAYTALNTARIPKVTPLVGEGG++DDFEISS IDDAV+IKGA NVPVCLTMSRV Sbjct: 125 GLDLDALGIVDGKFCWVVFVDILVLQADGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSNIDDAVAIKGATNVPVCLTMSRV 215
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A7S2Y3L9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3L9_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.730e-24 Identity = 53/90 (58.89%), Postives = 70/90 (77.78%), Query Frame = 1 Query: 7 DLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVF-DDFEISSEIDDAVSIKGAANVPVCLTMSRV 264 D +L I+ G+FCWVV+VDIL ADGN+LDA+SFAAY ALNTAR+PK+T + GE G DDFE+SS++ D+V + A +VPVC+T+S V Sbjct: 122 DTHSLCIIPGRFCWVVYVDILVLRADGNVLDATSFAAYAALNTARVPKLTVVPGEAGASEDDFELSSDVADSVPLL-AQDVPVCITLSLV 210
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A835YWB1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 7.810e-21 Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 4 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEG-GVFDDFEISSEIDDAVSIKGAANVPVCLTMSRVR 267 +DL +L I+ G+FCW+V++D+L ADGNLLDA+SFAAY A NTA +P+ T + GEG GV DDFEI +++ A + GA V L + +V+ Sbjct: 105 LDLKSLCIIPGRFCWIVYLDVLVLQADGNLLDAASFAAYVAFNTALVPRTTVISGEGAGVEDDFEIDGDLNTATRLPGADKVHEQLHLDQVQ 196
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: R7T790_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T790_CAPTE) HSP 1 Score: 66.2 bits (160), Expect = 8.280e-11 Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 4 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRVRLDGV 279 +DL+AL I+ GK CW+++VD+L GNL DA + A +AL+ RIP VT VGE G + E+S + D + G NVP +T++++ L V Sbjct: 115 LDLEALCIISGKQCWLLYVDVLILECGGNLFDAVALAVKSALHQTRIPLVTVSVGERGEAE-IELSDDPFDCKRV-GTDNVPCLVTLNKIGLAHV 207
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A0C9RSH6_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_15114_1182 transcribed RNA sequence n=3 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9RSH6_9SPER) HSP 1 Score: 59.7 bits (143), Expect = 2.030e-8 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 1 GIDLDALGIVDGKFCWVVFVD---ILADGNLLDASSFAAYTALNTARIPKVTPLVGEG-GVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 264 GIDL L +V+GKFCW ++++ + +DGNLLDA A AL+ IPKV + G +D IS DD S + VPV +T+++V Sbjct: 121 GIDLTNLKVVEGKFCWDLYIEGLVVSSDGNLLDALGIAIKAALSNTCIPKVEVVPGTSPDQQEDIGIS---DDEFSHLDTSRVPVIVTLTKV 209
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: F6PLY6_CIOIN (Exosome complex component RRP42-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6PLY6_CIOIN) HSP 1 Score: 58.2 bits (139), Expect = 7.340e-8 Identity = 35/90 (38.89%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 4 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 264 IDL+ LGI+ K CWVV VD+L GNLLDA S A AL+ +P + G+ G + + + +D V N PV +T+S+V Sbjct: 119 IDLNTLGIIPHKQCWVVHVDVLILECGGNLLDAVSIAVKAALHNTGVPNIQVTDGDEGT-QEISLPDDPND-VKFINTVNAPVLVTISKV 206
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A7C2VK39_9ARCH (Exosome complex component Rrp42 n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C2VK39_9ARCH) HSP 1 Score: 54.3 bits (129), Expect = 1.680e-6 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 4 IDLDALGIVDGKFCWVVFVD--ILAD-GNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 264 I+L+ L ++ G+ WV+FVD IL D GNL DASS+AA AL T +IP+V + G+ V D + ID+ VPV +T SRV Sbjct: 118 INLEKLCVIPGEKVWVLFVDLYILDDNGNLFDASSYAAVAALLTTKIPEVE-VNGDNVVIRDERMLLPIDE---------VPVSITFSRV 197
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: UPI001E1DF716 (exosome complex component RRP42-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF716) HSP 1 Score: 53.9 bits (128), Expect = 2.430e-6 Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 4 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 264 +DL L +V+GK CWVV++D+L GNL DA+S A AL IP +T EG + + E+S + D + + P +T+S++ Sbjct: 119 LDLKQLCVVEGKQCWVVYIDVLLLECGGNLFDAASIAVKAALFNTCIPTLTVTQDEGHI--ELELSDDPYDVQRLD-VMHAPCIVTLSKI 205
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: T1EEF6_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EEF6_HELRO) HSP 1 Score: 53.9 bits (128), Expect = 2.470e-6 Identity = 31/90 (34.44%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 4 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 264 +D + LGI+ GK CWV++VD+L GNL+DA S A AL ++IP +T + E + E+S + D + + P +T+++V Sbjct: 119 LDYEKLGIIPGKKCWVLYVDVLILEVGGNLIDAISLAVKAALFNSKIPNLTVVTSELNEAE-IELSDDPYDCFRLD-VSRAPCIVTLNKV 206 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16745.4553.1 >prot_L-elsbetiae_contig16745.4553.1 ID=prot_L-elsbetiae_contig16745.4553.1|Name=mRNA_L-elsbetiae_contig16745.4553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp GIDLDALGIVDGKFCWVVFVDILADGNLLDASSFAAYTALNTARIPKVTPback to top mRNA from alignment at L-elsbetiae_contig16745:2241..3537- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16745.4553.1 ID=mRNA_L-elsbetiae_contig16745.4553.1|Name=mRNA_L-elsbetiae_contig16745.4553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1297bp|location=Sequence derived from alignment at L-elsbetiae_contig16745:2241..3537- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16745:2241..3537- >mRNA_L-elsbetiae_contig16745.4553.1 ID=mRNA_L-elsbetiae_contig16745.4553.1|Name=mRNA_L-elsbetiae_contig16745.4553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=582bp|location=Sequence derived from alignment at L-elsbetiae_contig16745:2241..3537- (Laminarionema elsbetiae ELsaHSoW15)back to top |