prot_L-elsbetiae_contig1674.4549.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1674.4549.1
Unique Nameprot_L-elsbetiae_contig1674.4549.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length217
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1674.4549.1 vs. uniprot
Match: D7G4T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T4_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.970e-14
Identity = 81/253 (32.02%), Postives = 118/253 (46.64%), Query Frame = 0 
Query:    1 MEGNRDRREKDRKGGWASSYEGSAAKRRADEVLARLEALEVSFARVEEQAAATSPANFISGGGVP-ELRRAGVRNDAASAPNTQSAAGAATFNEAPISIMATAELNGGVLQSSLHVPIEGVDSKDNFGNSSGASCPPPPLSKEARSRAREEK---------KEPAAISTTGSPSEPARRPEYGVAFPVAMHESDHPLPTGR---------------------------TGGTTQQQSEFYFNLGRRMMLDSIE 216
            ++GNR+  E+   GGWA S EGSAA+RRADEVLAR+ ALEV F RVE+Q   T+PA   +   VP  +  +  R+  A+A N+ S       N      +  AE+     +        G DS          S PPP L +++++R R++K          E  A++ +G  +   RR     A P AM E   P   GR                           +GGT +Q ++FYF++GR M+LD+ +
Sbjct:  224 LQGNRNLEER---GGWAGSDEGSAARRRADEVLARISALEVYFDRVEDQVVRTAPAPAAAEAQVPGRVPLSKGRSSDAAASNSCSNPTLGVGNRGGQGEILLAEVETAQTEGQT-----GGDSSKALARGDRPSSPPP-LPRDSQTRTRKKKDDGEEEVLSSEEYAVANSGLRTLAPRRSNDAAAVPPAMLELS-PSKAGRGTLSRGFEVCDVGNGAGVSRGGNGESSSGGTNEQHNKFYFDVGRTMVLDTFQ 466
[Close]
BLAST of mRNA_L-elsbetiae_contig1674.4549.1 vs. uniprot
Match: A0A6H5L561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L561_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.870e-7
Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 0 
Query:    1 MEGNRDRREKDRKGGWASSYEGSAAKRRADEVLARLEALEVSFARVEEQAAATSPANFISGGGVP 65
            ++GNR+  E+   GGWA S EGSAA+RRADEVLAR+ ALE+ F RVE+Q   T PA   +G   P
Sbjct:  196 LQGNRNLEER---GGWAGSDEGSAARRRADEVLARISALEIYFDRVEDQVVRTPPAPATAGAQAP 257
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1674.4549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4T4_ECTSI4.970e-1432.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L561_9PHAE2.870e-755.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1674contigL-elsbetiae_contig1674:13464..14497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1674.4549.1mRNA_L-elsbetiae_contig1674.4549.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1674 13198..15486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1674.4549.1 ID=prot_L-elsbetiae_contig1674.4549.1|Name=mRNA_L-elsbetiae_contig1674.4549.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
MEGNRDRREKDRKGGWASSYEGSAAKRRADEVLARLEALEVSFARVEEQA
AATSPANFISGGGVPELRRAGVRNDAASAPNTQSAAGAATFNEAPISIMA
TAELNGGVLQSSLHVPIEGVDSKDNFGNSSGASCPPPPLSKEARSRAREE
KKEPAAISTTGSPSEPARRPEYGVAFPVAMHESDHPLPTGRTGGTTQQQS
EFYFNLGRRMMLDSIE*
back to top