mRNA_L-elsbetiae_contig1674.4548.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A6S9F1B3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9F1B3_HETAK) HSP 1 Score: 195 bits (495), Expect = 8.520e-58 Identity = 98/160 (61.25%), Postives = 119/160 (74.38%), Query Frame = 1 Query: 52 VNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAFPDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQT---HAASITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKELL 522 +NFLALDFDLT+LD+HT GRW G LT IRP F+ LIPAA+ AG+ +VTFSPQV MIS+VL+ AFP QI IRG+D SWEY+G GS GKQ+HMASA EEL A +ITRA+T+LVDDD+NNV +AL EGVK+ WCNP DP S+ + +L Sbjct: 42 LNFLALDFDLTVLDVHTGGRWLGRAADLTPHIRPLFRHLIPAALDAGLKTAIVTFSPQVHMISAVLEEAFPGKGGQITIRGEDGSWEYEGAGSTAGKQAHMASAVEELVARAGPDAPTITRATTVLVDDDLNNVSIALQEGVKAYWCNPDDPDSLTQAML 201
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A6H5L4J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J5_9PHAE) HSP 1 Score: 185 bits (470), Expect = 8.590e-55 Identity = 93/106 (87.74%), Postives = 96/106 (90.57%), Query Frame = 1 Query: 232 MISSVLKAAFPDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHAASITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKELLSLGNPREGA 549 MISSVLK AFP VASQIPIRGDDFSWEY+GRG+ DGKQSHMASAAEELTQTHAASITRASTLLVDDDVNNV +ALSEGV SVWCNPKDPTSMI ELLSL P E A Sbjct: 1 MISSVLKVAFPHVASQIPIRGDDFSWEYEGRGATDGKQSHMASAAEELTQTHAASITRASTLLVDDDVNNVNIALSEGVNSVWCNPKDPTSMITELLSLAKPHEKA 106
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A7S1G1M2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1M2_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.410e-52 Identity = 89/174 (51.15%), Postives = 121/174 (69.54%), Query Frame = 1 Query: 1 MEACCRKICTILKEDCKVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAFPDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHAA-SITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKEL 519 +E CC+ + + E+ +NFLALDFDLT +D+HT G+W GTP++L IRP F+ LI A AA + + +VTFSPQV I SVL FP+ S+IPIRG D SW Y+G G DGKQSHMASAAEEL T+A I++ STLL+DDD NN++ A + V+++W NP P ++ ++ Sbjct: 26 VEKCCKAVSKL--EELNINFLALDFDLTTIDVHTGGKWEGTPDELASHIRPIFKHLIARAHAANIAIAIVTFSPQVRHIGSVLDKTFPEFGSRIPIRGRDRSWTYEGVGCKDGKQSHMASAAEELMTTNAGLQISKDSTLLIDDDANNIRTAFRDHVRAIWLNPDKPHRVLDDI 197
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: D7G4T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T3_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.010e-50 Identity = 85/94 (90.43%), Postives = 90/94 (95.74%), Query Frame = 1 Query: 1 MEACCRKICTILKEDCKVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAFPDVASQI 282 M+ACCRKICTILKEDCKVNFLALDFDLTIL+IHTSGRWPGTPEQLTQRIRPFFQALIP AVA G++VGVVTFSPQVSMISSVLK AFP VASQ+ Sbjct: 1 MDACCRKICTILKEDCKVNFLALDFDLTILNIHTSGRWPGTPEQLTQRIRPFFQALIPIAVAKGIHVGVVTFSPQVSMISSVLKVAFPHVASQV 94
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A7S2I2G2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2G2_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.790e-49 Identity = 83/164 (50.61%), Postives = 117/164 (71.34%), Query Frame = 1 Query: 40 EDCKVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAFPDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHAA-SITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKELLSL 528 ++ K+NFLA+DFD TI+D+HT G+W G+ +L+ +RP FQ LI AA+ A + V VVTFSPQ I VL+ A P+ ++ I +RG D +W Y G GS DGKQSHMASA EE+ H I++ +TLL+DDDVNN+KVAL +GV++VW NP +++K++ +L Sbjct: 23 QELKINFLAIDFDKTIVDVHTHGQWKGSAHELSTHVRPLFQHLISAAIGADIKVAVVTFSPQCGQIKDVLEIALPESSNSIVVRGRDRTWSYVGAGSKDGKQSHMASAVEEIESMHEKLDISKNTTLLIDDDVNNIKVALLDGVRAVWLNPNKSHNLLKDIQAL 186
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A7S4QG65_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QG65_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.990e-48 Identity = 82/161 (50.93%), Postives = 114/161 (70.81%), Query Frame = 1 Query: 49 KVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAFPDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHAA-SITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKELLSL 528 K+NFLA+DFD TI+D+HT G+W G+ +L+ +RP FQ LIPAA+ A + V VVTFSPQ I VL+ FP+ ++ I +RG D +W Y G GS +GKQSHMASA EE+ H I+R +TLL+DDDV+N+KVAL +GV+++W NP ++K++ L Sbjct: 26 KINFLAIDFDQTIVDVHTHGQWKGSAHELSTHVRPLFQHLIPAAITADIKVAVVTFSPQCGQIKDVLEIIFPEFSNGIVVRGRDRTWSYLGAGSKEGKQSHMASAVEEIEAMHTKLDISRNTTLLIDDDVSNIKVALLDGVRAIWLNPSKSHLLLKDIQML 186
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A835YYJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ4_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.460e-45 Identity = 83/161 (51.55%), Postives = 115/161 (71.43%), Query Frame = 1 Query: 49 KVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAF-PDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHAASITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKELLSL 528 ++N LA DFD T++D+HT GRW + +L + +RPFF+ L+ A GM++ VVTFS QVS+I VL AF ++AS+I IRG D SW Y GRG+ +GKQ+H+ASAAEELTQ TR STLL DDD +NV+ AL GV++V C+ DP +M+++L++L Sbjct: 11 QINLLAFDFDQTLVDVHTFGRWQDSEAELAKHVRPFFRELVLAGAEHGMHMAVVTFSAQVSIIRGVLHEAFGEEIASRIVIRGADGSWTYTGRGACEGKQAHIASAAEELTQ-----FTRCSTLLFDDDEHNVRAALDAGVRAVLCDTHDPHAMVRDLIAL 166
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A7S2KRM2_9STRA (Hypothetical protein n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRM2_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.620e-45 Identity = 77/165 (46.67%), Postives = 111/165 (67.27%), Query Frame = 1 Query: 43 DCKVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAFPDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHA---ASITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKELLSL 528 DC +NFLA+DFD T++D+HT GRW GT +LT+ +RP F L+PAA + + + TFS Q I V++ AFP++A I IRG+D +WEY G G GKQ HMASAAEEL A +T+A+TLL+DDD N++++L + +++W NPK+P ++ +L L Sbjct: 74 DCGINFLAIDFDQTMIDVHTGGRWQGTALELTEHLRPVFLHLVPAATNRNIRIAICTFSGQTKHIRDVMEYAFPNIAELIVIRGNDKTWEYHGNGFKRGKQQHMASAAEELLAEQALGVTDVTKATTLLIDDDPKNIRMSLKDRTRAIWFNPKEPNELLDNILML 238
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A7S0CHW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHW4_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.570e-45 Identity = 80/145 (55.17%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 49 KVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIP-AAVAAGMYVGVVTFSPQVSMISSVLKAAFPDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHAAS-ITRASTLLVDDDVNNVKVALSEGVKSV 477 K+NFLA+DFDLT++D+HT G W GTP +L +RP F+ L+ AAV G+ + +VTFSPQV I VLK FPD IPIRG D SW Y+G GS +GKQ++MASAAEEL T+ STLL+DDDVNN+K+AL +GV+++ Sbjct: 8 KINFLAIDFDLTMIDVHTGGTWKGTPMELASHVRPLFKQLVTEAAVNGGIKIAIVTFSPQVRNIGDVLKVTFPDFHDSIPIRGRDKSWTYEGGGSREGKQAYMASAAEELGSIFPGEDFTKNSTLLIDDDVNNIKIALKDGVRAI 152
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Match: A0A7S1U168_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U168_9STRA) HSP 1 Score: 162 bits (411), Expect = 8.000e-45 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 49 KVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRPFFQALIPAAVAAGMYVGVVTFSPQVSMISSVLKAAF-PDVASQIPIRGDDFSWEYDGRGSMDGKQSHMASAAEELTQTHAASITRASTLLVDDDVNNVKVALSEGVKSVWCNPKDPTSMIKEL 519 +VN LA+DFD T++ HT G+W + E+L +R FF+ +IPAA+ G++V VVTF+PQ ++ VLKAAF DVA++IP+RGDD SWEY G G GKQ HMASAAEEL H I R +TLLVDDD++NV++AL GV+++ P P + +++ Sbjct: 65 QVNLLAVDFDCTLISTHTGGQWSYSCEELAAYVRDFFKLMIPAAIETGLHVAVVTFTPQTHLVHGVLKAAFGADVAAKIPVRGDDKSWEYRGDGVCCGKQGHMASAAEELMVMHDIHIERGTTLLVDDDISNVRLALEHGVRAILFKPDSPEDIARDI 222 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1674.4548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1674.4548.1 >prot_L-elsbetiae_contig1674.4548.1 ID=prot_L-elsbetiae_contig1674.4548.1|Name=mRNA_L-elsbetiae_contig1674.4548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp MEACCRKICTILKEDCKVNFLALDFDLTILDIHTSGRWPGTPEQLTQRIRback to top mRNA from alignment at L-elsbetiae_contig1674:310..6597- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1674.4548.1 ID=mRNA_L-elsbetiae_contig1674.4548.1|Name=mRNA_L-elsbetiae_contig1674.4548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6288bp|location=Sequence derived from alignment at L-elsbetiae_contig1674:310..6597- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1674:310..6597- >mRNA_L-elsbetiae_contig1674.4548.1 ID=mRNA_L-elsbetiae_contig1674.4548.1|Name=mRNA_L-elsbetiae_contig1674.4548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig1674:310..6597- (Laminarionema elsbetiae ELsaHSoW15)back to top |