prot_L-elsbetiae_contig16723.4539.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig16723.4539.1
Unique Name	prot_L-elsbetiae_contig16723.4539.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	133

Homology

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BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JPF0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF0_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 9.230e-70
Identity = 105/133 (78.95%), Postives = 117/133 (87.97%), Query Frame = 0

Query:    1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 133
            D +EEK+R W ++AR RF ATKIGVSGSMIQ QA +IAAQM KT+F+AT GWLHRFLKRY++T V LHGEAGDVDK KVAEEIERIREQL+EFDVEFIFNMDETG F+RCFP+GTYV R E AAGVNSKTARG
Sbjct:   64 DEVEEKLRKWIKIARARFNATKIGVSGSMIQAQALEIAAQMGKTNFRATKGWLHRFLKRYSFTRVQLHGEAGDVDKQKVAEEIERIREQLQEFDVEFIFNMDETGLFFRCFPKGTYVTRGEAAAGVNSKTARG 196

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BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: D7G3D6_ECTSI (Similar to Tigger transposable element-derived protein 6, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D6_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 2.240e-67
Identity = 100/108 (92.59%), Postives = 103/108 (95.37%), Query Frame = 0

Query:    6 KVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPR 113
            KVRHWFQVARERFKATKIGVSGSM+QV+ATKIAAQM KTDFKATNGWLHRFLKRYNYTHV LHGEAGDVD AKVAEEIE+IREQ KEFDVEFIFNMDETG FYRCFPR
Sbjct:   12 KVRHWFQVARERFKATKIGVSGSMVQVRATKIAAQMNKTDFKATNGWLHRFLKRYNYTHVKLHGEAGDVDTAKVAEEIEQIREQHKEFDVEFIFNMDETGLFYRCFPR 119

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BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.410e-66
Identity = 106/133 (79.70%), Postives = 118/133 (88.72%), Query Frame = 0

Query:    1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 133
            D +EEK+R W ++AR RF ATK+GVSGSMIQ QA KIAAQM KT+FKATNGWL+RFLKRY++THV LHGEAGDVDK KVAEEIERIREQL+EFDV+FIFNMDE G F+RCFPRGTYV R E AAGVNSKTARG
Sbjct:   64 DEVEEKLRKWIKIARARFDATKMGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARG 196

[Close]

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.480e-58
Identity = 97/132 (73.48%), Postives = 107/132 (81.06%), Query Frame = 0

Query:    5 EKVRHWF---QVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 133
            EK+RH        R    ATKIGVSGSMIQ QA KI AQM K +FKATNGWLHRFLKRY++THV LHGEAGDVDK KVAEEIERIR+ L+EFDVEFIF+MDETG F+RCFPRGTYV + E AAGVNS+T RG
Sbjct:   44 EKIRHMELNQDALRAPKTATKIGVSGSMIQAQALKIVAQMGKNNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDVEFIFDMDETGLFFRCFPRGTYVTKGEAAAGVNSETVRG 175

[Close]

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.440e-57
Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 0

Query:    1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 133
            D LE+++  W +VAR RF+ TKIG+SG MIQ QATK A++M K DF A+ GWLHRFLKRY + H+NLHGEAGDVDK K  E+I +IREQL+ FDVE IFNMDETG F+RCFPRGTYV R E AAGVN KTARG
Sbjct:   30 DDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARG 162

[Close]

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.950e-56
Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 0

Query:    1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 133
            D LE+++  W +VAR RF+ TKIG+SG MIQ QATK A++M K DF A+ GWLHRFLKRY + H+NLHGEAGDVDK K  E+I +IREQL+ FDVE IFNMDETG F+RCFPRGTYV R E AAGVN KTARG
Sbjct:  235 DDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARG 367

[Close]

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5K549_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K549_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 3.630e-56
Identity = 93/114 (81.58%), Postives = 102/114 (89.47%), Query Frame = 0

Query:   20 ATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 133
            ATKIGVSGSMIQ QA KIAAQM K +FKATNGWLHRFLKRY++T+V L G+AGDVDK KVAEEIERIREQL+EFDVEFIFNMDE G F+RCFPRGT+V R + AAGVNSKTARG
Sbjct:  103 ATKIGVSGSMIQAQALKIAAQMGKANFKATNGWLHRFLKRYSFTYVQLRGKAGDVDKQKVAEEIERIREQLQEFDVEFIFNMDEMGLFFRCFPRGTHVTRGQAAAGVNSKTARG 216

[Close]

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5KMN9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN9_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.560e-54
Identity = 90/114 (78.95%), Postives = 99/114 (86.84%), Query Frame = 0

Query:   19 KATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTAR 132
            +AT+IG+SGSMIQ QA KIAAQM KT+FKATNGWLHRFLKR + THV LH EAGDVDK KVAEE +RIREQL+EFDVEF F MDETG F+RCFPRGTYV R E AAG+NSKTAR
Sbjct:   73 EATEIGLSGSMIQAQALKIAAQMGKTNFKATNGWLHRFLKRDSSTHVQLH-EAGDVDKQKVAEETKRIREQLQEFDVEFTFKMDETGLFFRCFPRGTYVTRGEAAAGINSKTAR 185

[Close]

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JWH8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH8_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.410e-52
Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 0

Query:   29 MIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 133
            MIQ QA KIAAQM KT+FKATNGWLHRFLKRY++THV LHGEAGDVDK KVAEEI+RIREQL+ FDVEFIF MDETG F+R FPRGTYV R E AA VN KTARG
Sbjct:    1 MIQAQALKIAAQMGKTNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIDRIREQLQVFDVEFIFVMDETGLFFRYFPRGTYVTRGEAAAAVNCKTARG 105

[Close]

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JT55_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT55_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.290e-52
Identity = 87/114 (76.32%), Postives = 98/114 (85.96%), Query Frame = 0

Query:    1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRG 114
            D +EEK+R W ++AR RF  TKIGVSGSMIQ QA KIAAQM KT+FKAT+GWLHRFL RY++THV LHGEAGDVDK KVAEEIERIREQL+EFDVEFI N+ ET  F+RCFPRG
Sbjct:  157 DEVEEKLRKWIKIARARFNETKIGVSGSMIQAQALKIAAQMGKTNFKATSGWLHRFLIRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVEFILNIVETRLFFRCFPRG 270

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JPF0_9PHAE	9.230e-70	78.95	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
D7G3D6_ECTSI	2.240e-67	92.59	Similar to Tigger transposable element-derived pro...	[more]
A0A6H5JNS8_9PHAE	1.410e-66	79.70	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5K051_9PHAE	1.480e-58	73.48	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JEY2_9PHAE	2.440e-57	69.17	HTH CENPB-type domain-containing protein n=2 Tax=E...	[more]
A0A6H5JV64_9PHAE	1.950e-56	69.17	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5K549_9PHAE	3.630e-56	81.58	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KMN9_9PHAE	1.560e-54	78.95	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JWH8_9PHAE	1.410e-52	80.95	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JT55_9PHAE	3.290e-52	76.32	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	GENE3D	1.10.10.60		coord: 1..60 e-value: 8.7E-15 score: 56.6
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 2..112
IPR006600	HTH CenpB-type DNA-binding domain	SMART	SM00674	cenpb	coord: 1..66 e-value: 1.3E-7 score: 41.3
IPR006600	HTH CenpB-type DNA-binding domain	PFAM	PF03221	HTH_Tnp_Tc5	coord: 3..65 e-value: 2.6E-13 score: 49.8
IPR006600	HTH CenpB-type DNA-binding domain	PROSITE	PS51253	HTH_CENPB	coord: 1..66 score: 13.149
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 3..61

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig16723	contig	L-elsbetiae_contig16723:1278..1929 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig16723.4539.1	mRNA_L-elsbetiae_contig16723.4539.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig16723 1278..1929 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig16723.4539.1 ID=prot_L-elsbetiae_contig16723.4539.1|Name=mRNA_L-elsbetiae_contig16723.4539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp
DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATN
GWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFN
MDETGFFYRCFPRGTYVPREETAAGVNSKTARG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006600	HTH_CenpB_DNA-bd_dom
IPR009057	Homeobox-like_sf