mRNA_L-elsbetiae_contig1046.454.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A6H5KXB8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXB8_9PHAE) HSP 1 Score: 356 bits (914), Expect = 3.440e-118 Identity = 195/259 (75.29%), Postives = 210/259 (81.08%), Query Frame = 1 Query: 1 INPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKA-----AXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSFGLVDDSDASKDD 762 INP VGLSAKFLIPNVFAWCIGMQSIGLISIS+F AAAILL GLFCYDIFWVFGTEVMMTVAT+IEAPVKFLFP+LTDPSK+YPFSVLGLGDIVIPATFCTLMR SFD LEGARQAEAAAARAL +V +KNP+ALWLDS LGTPVA+ A AA V A G G RSYFDNSVAAYA+GLGLCF VNF+S+SGQPALLYLNPALL SA TA+LNGNGEL +LL+FG+ DS AS DD Sbjct: 262 INPSVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMR----SFDIYLEGARQAEAAAARALLTEVGNKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGVAGAVGEAGGGRSYFDNSVAAYAIGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAFGVGKDSKASDDD 516
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A835YS42_9STRA (Signal peptide peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS42_9STRA) HSP 1 Score: 179 bits (453), Expect = 6.160e-52 Identity = 108/242 (44.63%), Postives = 131/242 (54.13%), Query Frame = 1 Query: 1 INPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 726 + P L F++ N AWCIGMQ+IGLI+I SF A + L GLF YDI+WVFGT+VM+TVATR EAPVKF+FP D + YPF+VLGLGDIVIPA +L+R + S AE A RA GT V SYF VAAYA+GL CF N +S+SGQPALLYLNPA++GSA A +NG GE ++L F Sbjct: 60 LYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSL---------AERDAGRA-------------------GTKV--------------------------------SYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNG-GEFRELFDF 240
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S1Z2G9_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2G9_TRICV) HSP 1 Score: 165 bits (418), Expect = 2.000e-45 Identity = 108/245 (44.08%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 13 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLF--PALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGN-GELQQLLSFGLVD 738 V +S KFL+ N AW I M S+G IS+ SF AAILLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+ P +P K YPFSVLGLGD+VIP F M R+ AL QV S YF + AAYALGL CFAVN I+ +GQPALLYL+PA +GSA A NG GE+ GL + Sbjct: 201 VAMSQKFLVSNAIAWAIAMTSLGAISLGSFQTAAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYASPPSAEP-KPYPFSVLGLGDVVIPGLFVRFMARMD------------------EALQPQVFS-------------------------------------------------YFTAATAAYALGLTACFAVNEITHAGQPALLYLDPACIGSALAVGAANGQLGEVWNFEEEGLTE 377
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A6U0R1W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0R1W4_9STRA) HSP 1 Score: 166 bits (421), Expect = 2.030e-45 Identity = 97/239 (40.59%), Postives = 126/239 (52.72%), Query Frame = 1 Query: 13 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL-TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 726 V + KF++ N+ AW + M S+G IS+ SF A ILL GLFCYDIFWVFGTEVMMTVAT++EAP+KFL+PA ++ + YPFSVLGLGD+VIP F LM +V K+ SYF + AAYALGL CF VN I+++GQPALLYLNPA +GSA ++NG +L ++++F Sbjct: 248 VAMEQKFILSNIIAWALAMISLGSISLGSFQTAVILLTGLFCYDIFWVFGTEVMMTVATKVEAPIKFLYPAPPSEIERAYPFSVLGLGDVVIPGLFVRLMTKVDQDLKPKV-------------------------------------------------------------------FSYFSAATAAYALGLSACFVVNEITQAGQPALLYLNPACIGSALVCGVING--QLDEIINF 417
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S4IZL8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZL8_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.580e-41 Identity = 99/241 (41.08%), Postives = 125/241 (51.87%), Query Frame = 1 Query: 13 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLF---PALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 726 V ++ KF++ N+ AW + M S+G IS+ SF AILLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+ P L + K YPFSVLGLGD+VIP F M +V D L+ A SYF + AAYA+GL CF VN I+ +GQPALLYL+PA +GSA A NG+L ++ +F Sbjct: 327 VAMTQKFMVSNIIAWSLAMTSLGAISLGSFQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYANPPELAE-GKSYPFSVLGLGDVVIPGLFVRFMSKV----DEALKPA---------------------------------------------------------------VGSYFTAATAAYAVGLASCFVVNEITHAGQPALLYLDPACVGSALAVGA--ANGQLSEVWNF 497
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S2MA48_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MA48_9STRA) HSP 1 Score: 146 bits (369), Expect = 7.010e-38 Identity = 93/228 (40.79%), Postives = 111/228 (48.68%), Query Frame = 1 Query: 13 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL-TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLN 693 V L KFLI N AW +GM S+G AILLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+ A +D K YPFSVLGLGD+VIP F M +V E + KN SYF + AY GL CF N + ++GQPALLYL+P+L+GSA A A +N Sbjct: 240 VALENKFLISNAIAWALGMVSLGXXXXXXXQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYTAPPSDTPKDYPFSVLGLGDVVIPGLFVRFMAKVD----------------------EVLQPKN---------------------------------------------LSYFTTATFAYGAGLAACFGANEMFQNGQPALLYLDPSLVGSALACAAVN 400
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: K0SK77_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SK77_THAOC) HSP 1 Score: 131 bits (330), Expect = 2.060e-32 Identity = 87/236 (36.86%), Postives = 113/236 (47.88%), Query Frame = 1 Query: 19 LSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 726 + KF+ N+ AW +GM S L GLF YD FWVFG++VMMTVAT++EAPVKF+FPA D + Y FSVLGLGD+VIP F LM + + NP ++F SYF+ +V AYA GLG CF N I ++GQPAL+YL+P+L+GSA A A + NG++ QL F Sbjct: 222 MEQKFIASNILAWSLGMASXXXXXXXXXXXXXXXLGGLFFYDAFWVFGSDVMMTVATKVEAPVKFIFPA--DTVRDYNFSVLGLGDLVIPGLFVRLMAKADEAL-------------------------NP-----ENF-------------------------------------SYFNTAVLAYAFGLGACFTANAIFQNGQPALIYLDPSLVGSALACA--SANGQVAQLWDF 386
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S3T9S7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T9S7_EMIHU) HSP 1 Score: 124 bits (312), Expect = 4.370e-31 Identity = 86/223 (38.57%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 67 MQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL---TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 726 M S+G+I++ SF+AAA LL GLFCYD F+VF ++VM+TVAT+IEAP KFL+ A+ D +YPFSVLGLGD+V+P F L+R + + G + EA A SYF + AYA GL FA N++++SGQPAL+Y+ P+LL SA ATA GEL LL F Sbjct: 58 MTSLGVIALESFAAAAALLLGLFCYDAFFVFKSDVMLTVATQIEAPAKFLWAAVGAGADAGSRYPFSVLGLGDVVVPGAFVGLLRELDKE-QGRAGGGSEEEAREA---------------------------------------------------------SYFQVGLGAYAAGLLSTFAANYLTKSGQPALVYIVPSLLLSAVATAA--SRGELPSLLEF 220
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S1BCW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCW1_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.610e-30 Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 4 NPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPS--KQYPFSVLGLGDIVIPATFCTLMRRV 318 +P + ++ KFL+ NV AW IGM S+ ++ISSF AILL GLF YDIFWVFGTEVMMTVAT+IEAPVKFL+ + ++YPFSVLGLGDIVIP F ++ ++ Sbjct: 281 SPAIAITDKFLVSNVMAWSIGMVSLAAVNISSFQTGAILLGGLFFYDIFWVFGTEVMMTVATKIEAPVKFLYYTVPPDGIPREYPFSVLGLGDIVIPGLFVRMLGKM 387
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S3T9S4_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T9S4_EMIHU) HSP 1 Score: 124 bits (312), Expect = 1.550e-29 Identity = 86/223 (38.57%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 67 MQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL---TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 726 M S+G+I++ SF+AAA LL GLFCYD F+VF ++VM+TVAT+IEAP KFL+ A+ D +YPFSVLGLGD+V+P F L+R + + G + EA A SYF + AYA GL FA N++++SGQPAL+Y+ P+LL SA ATA GEL LL F Sbjct: 250 MTSLGVIALESFAAAAALLLGLFCYDAFFVFKSDVMLTVATQIEAPAKFLWAAVGAGADAGSRYPFSVLGLGDVVVPGAFVGLLRELDKE-QGRAGGGSEEEAREA---------------------------------------------------------SYFQVGLGAYAAGLLSTFAANYLTKSGQPALVYIVPSLLLSAVATAA--SRGELPSLLEF 412 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1046.454.1 >prot_L-elsbetiae_contig1046.454.1 ID=prot_L-elsbetiae_contig1046.454.1|Name=mRNA_L-elsbetiae_contig1046.454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp INPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFback to top mRNA from alignment at L-elsbetiae_contig1046:26673..29374- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1046.454.1 ID=mRNA_L-elsbetiae_contig1046.454.1|Name=mRNA_L-elsbetiae_contig1046.454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2702bp|location=Sequence derived from alignment at L-elsbetiae_contig1046:26673..29374- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1046:26673..29374- >mRNA_L-elsbetiae_contig1046.454.1 ID=mRNA_L-elsbetiae_contig1046.454.1|Name=mRNA_L-elsbetiae_contig1046.454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig1046:26673..29374- (Laminarionema elsbetiae ELsaHSoW15)back to top |